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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3bd0D_

Fold library idPDB HeaderMoleculeTitle
c3bd0D_PDB header: peptide binding proteinChain: D: PDB Molecule: protein memo1;PDBTitle: crystal structure of memo, form ii


Added to library: Tue Mar 16 12:41:47 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VVCREASHAGSWYTASGPQLNAQLEGWLSQVQSTKRPARAIIAPHAGYTYCGSCAAHAYKQVDPSITRRI
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Known secondary structure (DSSP)



TTBTTTB
S
TS


S
S
S

S
TT

TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence FILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAM
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Known secondary structure (DSSP)
SSS

SS
SSS

SS

B
TTT




TTGGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIE
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Known secondary structure (DSSP) GGGTTS

S

T
TT



BGGGTB



GGGSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCRNWQD
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Known secondary structure (DSSP) TT




TTTTT

SS


STT
 .........290...
Sequence SSVSYAAGALTVH
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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