Emaill.a.kelley@imperial.ac.uk
DescriptionP77790
DateThu Jan 5 12:32:53 GMT 2012
Unique Job IDf73adf9a98f4749d

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1d1r44a_



100.0 36 Fold:Hedgehog/DD-peptidase
Superfamily:Hedgehog/DD-peptidase
Family:VanX-like
2d2vo9a1



99.8 25 Fold:Hedgehog/DD-peptidase
Superfamily:Hedgehog/DD-peptidase
Family:VanY-like
3c2vo9C_



99.8 25 PDB header:hydrolase
Chain: C: PDB Molecule:l-alanyl-d-glutamate peptidase;
PDBTitle: crystal structure of the enzymatically active domain of the2 listeria monocytogenes bacteriophage 500 endolysin ply500
4d3d1ma1



95.8 19 Fold:Hedgehog/DD-peptidase
Superfamily:Hedgehog/DD-peptidase
Family:Hedgehog (development protein), N-terminal signaling domain
5d1lbua2



95.6 20 Fold:Hedgehog/DD-peptidase
Superfamily:Hedgehog/DD-peptidase
Family:Muramoyl-pentapeptide carboxypeptidase
6c1lbuA_



95.5 22 PDB header:hydrolase
Chain: A: PDB Molecule:muramoyl-pentapeptide carboxypeptidase;
PDBTitle: hydrolase metallo (zn) dd-peptidase
7c3m1nB_



94.9 19 PDB header:signaling protein
Chain: B: PDB Molecule:sonic hedgehog protein;
PDBTitle: crystal structure of human sonic hedgehog n-terminal domain
8d2ibge1



93.4 18 Fold:Hedgehog/DD-peptidase
Superfamily:Hedgehog/DD-peptidase
Family:Hedgehog (development protein), N-terminal signaling domain
9d1tzpa_



79.7 20 Fold:Hedgehog/DD-peptidase
Superfamily:Hedgehog/DD-peptidase
Family:MepA-like
10d1eswa_



33.7 13 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
11d1nwba_



26.5 17 Fold:HesB-like domain
Superfamily:HesB-like domain
Family:HesB-like domain
12c2k4zA_



26.4 19 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:dsrr;
PDBTitle: solution nmr structure of allochromatium vinosum dsrr:2 northeast structural genomics consortium target op5
13d2j07a2



25.2 10 Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
14c2apnA_



21.9 23 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein hi1723;
PDBTitle: hi1723 solution structure
15d1x1na1



20.7 9 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
16c3kyzA_



19.8 11 PDB header:transferase
Chain: A: PDB Molecule:sensor protein pfes;
PDBTitle: the crystal structure of the sensor domain of two-component2 sensor pfes from pseudomonas aeruginosa pa01
17d1bhua_



19.3 31 Fold:gamma-Crystallin-like
Superfamily:gamma-Crystallin-like
Family:Streptomyces metalloproteinase inhibitor, SMPI
18d1xpja_



18.9 29 Fold:HAD-like
Superfamily:HAD-like
Family:Hypothetical protein VC0232
19d2d8za1



18.2 33 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
20c3aq3A_



16.8 22 PDB header:toxin
Chain: A: PDB Molecule:6b protein;
PDBTitle: molecular insights into plant cell proliferation disturbance by2 agrobacterium protein 6b
21d2cura2



not modelled 16.6 25 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
22c3d2hA_



not modelled 14.3 6 PDB header:oxidoreductase
Chain: A: PDB Molecule:berberine bridge-forming enzyme;
PDBTitle: structure of berberine bridge enzyme from eschscholzia californica,2 monoclinic crystal form
23d1n8ja_



not modelled 14.0 14 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
24c2ipiD_



not modelled 13.6 8 PDB header:oxidoreductase
Chain: D: PDB Molecule:aclacinomycin oxidoreductase (aknox);
PDBTitle: crystal structure of aclacinomycin oxidoreductase
25d2nlya1



not modelled 11.1 17 Fold:7-stranded beta/alpha barrel
Superfamily:Glycoside hydrolase/deacetylase
Family:Divergent polysaccharide deacetylase
26d2qn6b1



not modelled 9.3 20 Fold:Ferredoxin-like
Superfamily:eIF-2-alpha, C-terminal domain
Family:eIF-2-alpha, C-terminal domain
27c3fwaA_



not modelled 9.1 6 PDB header:flavoprotein
Chain: A: PDB Molecule:reticuline oxidase;
PDBTitle: structure of berberine bridge enzyme, c166a variant in complex with2 (s)-reticuline
28d2pp6a1



not modelled 9.1 13 Fold:Phage tail proteins
Superfamily:Phage tail proteins
Family:gpFII-like
29c3kebB_



not modelled 9.0 10 PDB header:oxidoreductase
Chain: B: PDB Molecule:probable thiol peroxidase;
PDBTitle: thiol peroxidase from chromobacterium violaceum
30d1vk9a_



not modelled 8.3 25 Fold:Cytidine deaminase-like
Superfamily:Cytidine deaminase-like
Family:Hypothetical protein TM1506
31d2r4qa1



not modelled 8.3 28 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:PTS system IIB component-like
Family:PTS system, Fructose specific IIB subunit-like
32c2ov2O_



not modelled 8.2 27 PDB header:protein binding/transferase
Chain: O: PDB Molecule:serine/threonine-protein kinase pak 4;
PDBTitle: the crystal structure of the human rac3 in complex with the crib2 domain of human p21-activated kinase 4 (pak4)
33c3lklB_



not modelled 8.0 16 PDB header:transport protein
Chain: B: PDB Molecule:antisigma-factor antagonist stas;
PDBTitle: crystal structure of the c-terminal domain of anti-sigma factor2 antagonist stas from rhodobacter sphaeroides
34d1np7a2



not modelled 7.8 11 Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
35c3o2iB_



not modelled 7.6 31 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein from2 leptospirillum sp. group ii uba
36d1tz7a1



not modelled 7.5 7 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
37c1dxyA_



not modelled 7.4 21 PDB header:oxidoreductase
Chain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase;
PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase
38c2h31A_



not modelled 7.2 16 PDB header:ligase, lyase
Chain: A: PDB Molecule:multifunctional protein ade2;
PDBTitle: crystal structure of human paics, a bifunctional carboxylase and2 synthetase in purine biosynthesis
39d2r48a1



not modelled 7.0 28 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:PTS system IIB component-like
Family:PTS system, Fructose specific IIB subunit-like
40c2kyrA_



not modelled 6.7 33 PDB header:transferase
Chain: A: PDB Molecule:fructose-like phosphotransferase enzyme iib component 1;
PDBTitle: solution structure of enzyme iib subunit of pts system from2 escherichia coli k12. northeast structural genomics consortium target3 er315/ontario center for structural proteomics target ec0544
41d1lvaa3



not modelled 6.5 4 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:C-terminal fragment of elongation factor SelB
42c1s1iS_



not modelled 6.2 26 PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l24-a;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h.
43c2zkru_



not modelled 6.2 26 PDB header:ribosomal protein/rna
Chain: U: PDB Molecule:rna expansion segment es41;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
44d1j4aa1



not modelled 6.1 25 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Formate/glycerate dehydrogenases, NAD-domain
45c1ybaC_



not modelled 6.1 22 PDB header:oxidoreductase
Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase;
PDBTitle: the active form of phosphoglycerate dehydrogenase
46c3fzeA_



not modelled 5.7 23 PDB header:protein binding
Chain: A: PDB Molecule:protein ste5;
PDBTitle: structure of the 'minimal scaffold' (ms) domain of ste52 that cocatalyzes fus3 phosphorylation by ste7
47d1yj5a1



not modelled 5.7 25 Fold:HAD-like
Superfamily:HAD-like
Family:phosphatase domain of polynucleotide kinase
48d1owla2



not modelled 5.5 17 Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
49c3izcZ_



not modelled 5.5 26 PDB header:ribosome
Chain: Z: PDB Molecule:60s ribosomal protein rpl24 (l24e);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
50c3lloA_



not modelled 5.5 13 PDB header:motor protein
Chain: A: PDB Molecule:prestin;
PDBTitle: crystal structure of the stas domain of motor protein prestin (anion2 transporter slc26a5)
51c4a1eT_



not modelled 5.5 21 PDB header:ribosome
Chain: T: PDB Molecule:rpl24;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna, 5.8s rrna3 and proteins of molecule 1
52d2naca1



not modelled 5.5 15 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Formate/glycerate dehydrogenases, NAD-domain
53c3iz5Z_



not modelled 5.4 21 PDB header:ribosome
Chain: Z: PDB Molecule:60s ribosomal protein l24 (l24e);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
54d2i0ka2



not modelled 5.4 11 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
55c3isyA_



not modelled 5.3 21 PDB header:protein binding
Chain: A: PDB Molecule:intracellular proteinase inhibitor;
PDBTitle: crystal structure of an intracellular proteinase inhibitor (ipi,2 bsu11130) from bacillus subtilis at 2.61 a resolution
56c3d8uA_



not modelled 5.3 14 PDB header:transcription regulator
Chain: A: PDB Molecule:purr transcriptional regulator;
PDBTitle: the crystal structure of a purr family transcriptional regulator from2 vibrio parahaemolyticus rimd 2210633
57c1vkzA_



not modelled 5.2 9 PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from2 thermotoga maritima at 2.30 a resolution
58d1vqou1



not modelled 5.2 25 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:Ribosomal protein L24e
59d1dnpa2



not modelled 5.1 13 Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain