PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1j4aa1

Fold library id	Fold	Superfamily	Family
d1j4aa1	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Formate/glycerate dehydrogenases, NAD-domain

Links to external resources
Added to library: Tue Mar 16 13:02:45 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P N A I A E H A A I Q A A R I L R Q D K A M D E K V A R H D L R W A P T I G R E V R D Q V V G V V G T G H I G Q V F M Q I M E G F G A K V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T
G G G S
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T Y D I F R N P E L E K K G Y Y V D S L D D L Y K Q A D V I S L H V P D V P A N V H M I N D E S I A K M K Q D V V I V N V S R G P L V D T D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
B
S
S
S
G G G T T
B S S
T T
S
G G G B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . .

Sequence A V I R G L D S G K I F G Y A M D V Y E G E V G I F N E D W E G K E F P D A R L A D L I A R P N V L V T P K T A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T T
T T T T T S
T T S
S
T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	N	A	I	A	E	H	A	A	I	Q	A	A	R	I	L	R	Q	D	K	A	M	D	E	K	V	A	R	H	D	L	R	W	A	P	T	I	G	R	E	V	R	D	Q	V	V	G	V	V	G	T	G	H	I	G	Q	V	F	M	Q	I	M	E	G	F	G	A	K	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T										T	T					T	T						G	G	G	S								S													T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	Y	D	I	F	R	N	P	E	L	E	K	K	G	Y	Y	V	D	S	L	D	D	L	Y	K	Q	A	D	V	I	S	L	H	V	P	D	V	P	A	N	V	H	M	I	N	D	E	S	I	A	K	M	K	Q	D	V	V	I	V	N	V	S	R	G	P	L	V	D	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S								T	T		B		S										S						S				G	G	G	T	T		B	S							S		T	T							S		G	G	G	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Sequence	A	V	I	R	G	L	D	S	G	K	I	F	G	Y	A	M	D	V	Y	E	G	E	V	G	I	F	N	E	D	W	E	G	K	E	F	P	D	A	R	L	A	D	L	I	A	R	P	N	V	L	V	T	P	K	T	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S							S			T	T		T	T	T	T	T	S			T	T	S			S											T	T					S	S