Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	G	D	T	K	V	I	N	Y	L	N	K	L	L	G	N	E	L	V	A	I	N	Q	Y	F	L	H	A	R	M	F	K	N	W	G	L	K	R	L	N	D	V	E	Y	H	E	S	I	D	E	M	K	H	A	D	R	Y	I	E
Secondary structure
SS confidence
Disorder		?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		R	I	L	F	L	E	G	L	P	N	L	Q	D	L	G	K	L	N	I	G	E	D	V	E	E	M	L	R	S	D	L	A	L	E	L	D	G	A	K	N	L	R	E	A	I	G	Y	A	D	S	V	H	D	Y	V	S	R	D	M	M
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Sequence		I	E	I	L	R	D	E	E	G	H	I	D	W	L	E	T	E	L	D	L	I	Q	K	M	G	L	Q	N	Y	L	Q	A	Q	I	R	E	E	G
Secondary structure
SS confidence
Disorder																																				?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2htn chain A domain 1 Region: 1 - 158 Aligned: 158 Modelled: 158 Confidence: 100.0% Identity: 100% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 3r2r chain A Region: 1 - 154 Aligned: 153 Modelled: 154 Confidence: 100.0% Identity: 46% PDB header:metal binding protein Chain: A: PDB Molecule:bacterioferritin; PDBTitle: 1.65a resolution structure of iron soaked ftna from pseudomonas2 aeruginosa (ph 6.0) Phyre2 PDB 2fkz chain A domain 1 Region: 1 - 154 Aligned: 154 Modelled: 154 Confidence: 100.0% Identity: 67% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 3gvy chain C Region: 1 - 155 Aligned: 155 Modelled: 155 Confidence: 100.0% Identity: 46% PDB header:metal binding protein Chain: C: PDB Molecule:bacterioferritin; PDBTitle: crystal structure of bacterioferritin from r.sphaeroides Phyre2 PDB 1jgc chain A Region: 1 - 157 Aligned: 157 Modelled: 157 Confidence: 100.0% Identity: 47% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 3bkn chain B Region: 1 - 155 Aligned: 155 Modelled: 155 Confidence: 100.0% Identity: 42% PDB header:metal binding protein Chain: B: PDB Molecule:bacterioferritin; PDBTitle: the structure of mycobacterial bacterioferritin Phyre2 PDB 3fvb chain B Region: 1 - 151 Aligned: 151 Modelled: 151 Confidence: 100.0% Identity: 51% PDB header:metal binding protein Chain: B: PDB Molecule:bacterioferritin; PDBTitle: crystal structure of ferritin (bacterioferritin) from2 brucella melitensis Phyre2 PDB 1nf4 chain A Region: 5 - 155 Aligned: 150 Modelled: 151 Confidence: 100.0% Identity: 29% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1vlg chain A Region: 1 - 158 Aligned: 158 Modelled: 158 Confidence: 100.0% Identity: 18% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 3qz3 chain A Region: 4 - 156 Aligned: 153 Modelled: 153 Confidence: 100.0% Identity: 16% PDB header:oxidoreductase Chain: A: PDB Molecule:ferritin; PDBTitle: the crystal structure of ferritin from vibrio cholerae o1 biovar el2 tor str. n16961 Phyre2 PDB 3qd8 chain M Region: 6 - 152 Aligned: 147 Modelled: 147 Confidence: 100.0% Identity: 18% PDB header:metal binding protein Chain: M: PDB Molecule:probable bacterioferritin bfrb; PDBTitle: crystal structure of mycobacterium tuberculosis bfrb Phyre2 PDB 1s3q chain A domain 1 Region: 4 - 157 Aligned: 154 Modelled: 154 Confidence: 100.0% Identity: 14% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 3bvk chain C Region: 2 - 157 Aligned: 156 Modelled: 156 Confidence: 100.0% Identity: 14% PDB header:oxidoreductase Chain: C: PDB Molecule:ferritin; PDBTitle: structural basis for the iron uptake mechanism of helicobacter pylori2 ferritin Phyre2 PDB 3e6s chain D Region: 4 - 153 Aligned: 150 Modelled: 150 Confidence: 100.0% Identity: 15% PDB header:oxidoreductase Chain: D: PDB Molecule:ferritin; PDBTitle: crystal structure of ferritin soaked with iron from pseudo-2 nitzschia multiseries Phyre2 PDB 1krq chain A Region: 4 - 157 Aligned: 154 Modelled: 154 Confidence: 100.0% Identity: 16% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1eum chain A Region: 4 - 153 Aligned: 150 Modelled: 150 Confidence: 100.0% Identity: 14% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 2jd8 chain C Region: 4 - 157 Aligned: 154 Modelled: 154 Confidence: 100.0% Identity: 19% PDB header:metal transport Chain: C: PDB Molecule:ferritin homolog; PDBTitle: crystal structure of the zn-soaked ferritin from the2 hyperthermophilic archaeal anaerobe pyrococcus furiosus Phyre2 PDB 1lb3 chain A Region: 1 - 154 Aligned: 154 Modelled: 154 Confidence: 100.0% Identity: 19% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 2za7 chain A domain 1 Region: 1 - 154 Aligned: 154 Modelled: 154 Confidence: 100.0% Identity: 21% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1mfr chain A Region: 4 - 154 Aligned: 151 Modelled: 151 Confidence: 100.0% Identity: 22% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 1 d2htna1 2 c3r2rA_ 3 d2fkza1 4 c3gvyC_ 5 d1jgca_ 6 c3bknB_ 7 c3fvbB_ 8 d1nf4a_ 9 d1vlga_ 10 c3qz3A_ 11 c3qd8M_ 12 d1s3qa1 13 c3bvkC_ 14 c3e6sD_ 15 d1krqa_ 16 d1euma_ 17 c2jd8C_ 18 d1lb3a_ 19 d2za7a1 20 d1mfra_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2htna1 100.0 100 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 2 c3r2rA_ 100.0 46 PDB header:metal binding protein Chain: A: PDB Molecule:bacterioferritin; PDBTitle: 1.65a resolution structure of iron soaked ftna from pseudomonas2 aeruginosa (ph 6.0) 3 d2fkza1 100.0 67 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 4 c3gvyC_ 100.0 46 PDB header:metal binding protein Chain: C: PDB Molecule:bacterioferritin; PDBTitle: crystal structure of bacterioferritin from r.sphaeroides 5 d1jgca_ 100.0 47 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 6 c3bknB_ 100.0 42 PDB header:metal binding protein Chain: B: PDB Molecule:bacterioferritin; PDBTitle: the structure of mycobacterial bacterioferritin 7 c3fvbB_ 100.0 51 PDB header:metal binding protein Chain: B: PDB Molecule:bacterioferritin; PDBTitle: crystal structure of ferritin (bacterioferritin) from2 brucella melitensis 8 d1nf4a_ 100.0 29 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 9 d1vlga_ 100.0 18 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 10 c3qz3A_ 100.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:ferritin; PDBTitle: the crystal structure of ferritin from vibrio cholerae o1 biovar el2 tor str. n16961 11 c3qd8M_ 100.0 18 PDB header:metal binding protein Chain: M: PDB Molecule:probable bacterioferritin bfrb; PDBTitle: crystal structure of mycobacterium tuberculosis bfrb 12 d1s3qa1 100.0 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 13 c3bvkC_ 100.0 14 PDB header:oxidoreductase Chain: C: PDB Molecule:ferritin; PDBTitle: structural basis for the iron uptake mechanism of helicobacter pylori2 ferritin 14 c3e6sD_ 100.0 15 PDB header:oxidoreductase Chain: D: PDB Molecule:ferritin; PDBTitle: crystal structure of ferritin soaked with iron from pseudo-2 nitzschia multiseries 15 d1krqa_ 100.0 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 16 d1euma_ 100.0 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 17 c2jd8C_ 100.0 19 PDB header:metal transport Chain: C: PDB Molecule:ferritin homolog; PDBTitle: crystal structure of the zn-soaked ferritin from the2 hyperthermophilic archaeal anaerobe pyrococcus furiosus 18 d1lb3a_ 100.0 19 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 19 d2za7a1 100.0 21 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 20 d1mfra_ 100.0 22 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 21 d1r03a_ not modelled 100.0 23 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 22 d1rcda_ not modelled 100.0 19 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 23 d2ceia1 not modelled 100.0 23 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 24 d1j30a_ not modelled 100.0 19 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 25 c2qqyA_ not modelled 100.0 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma b operon; PDBTitle: crystal structure of ferritin like, diiron-carboxylate proteins from2 bacillus anthracis str. ames 26 d1lkoa1 not modelled 100.0 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 27 c3a9qR_ not modelled 100.0 18 PDB header:oxidoreductase Chain: R: PDB Molecule: PDBTitle: crystal structure analysis of e173a variant of the soybean2 ferritin sfer4 28 d1yv1a1 not modelled 100.0 10 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 29 c2clbP_ not modelled 100.0 20 PDB header:metal binding protein Chain: P: PDB Molecule:dps-like protein; PDBTitle: the structure of the dps-like protein from sulfolobus2 solfataricus reveals a bacterioferritin-like di-metal3 binding site within a dps-like dodecameric assembly 30 c2vzbA_ not modelled 100.0 25 PDB header:metal transport Chain: A: PDB Molecule:putative bacterioferritin-related protein; PDBTitle: a dodecameric thioferritin in the bacterial domain, characterization2 of the bacterioferritin-related protein from bacteroides fragilis 31 d1z6om1 not modelled 100.0 18 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 32 d1yuza1 not modelled 100.0 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 33 d1ji5a_ not modelled 100.0 22 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 34 c2c41K_ not modelled 100.0 17 PDB header:iron-binding/oxidation protein Chain: K: PDB Molecule:dps family dna-binding stress response protein; PDBTitle: x-ray structure of dps from thermosynechococcus elongatus 35 d1jiga_ not modelled 100.0 25 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 36 c2d5kC_ not modelled 100.0 24 PDB header:metal binding protein Chain: C: PDB Molecule:dps family protein; PDBTitle: crystal structure of dps from staphylococcus aureus 37 c1dvbA_ not modelled 100.0 16 PDB header:electron transport Chain: A: PDB Molecule:rubrerythrin; PDBTitle: rubrerythrin 38 d1o9ra_ not modelled 100.0 19 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 39 c3iq1A_ not modelled 100.0 19 PDB header:metal transport Chain: A: PDB Molecule:dps family protein; PDBTitle: crystal structure of dps protein from vibrio cholerae o1, a member of2 a broad superfamily of ferritin-like diiron-carboxylate proteins 40 d1nnqa1 not modelled 100.0 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 41 c2chpC_ not modelled 99.9 18 PDB header:dna-binding protein Chain: C: PDB Molecule:metalloregulation dna-binding stress protein; PDBTitle: crystal structure of the dodecameric ferritin mrga from2 b.subtilis 168 42 d1n1qa_ not modelled 99.9 25 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 43 d1tjoa_ not modelled 99.9 22 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 44 c2vxxB_ not modelled 99.9 22 PDB header:dna-binding protein Chain: B: PDB Molecule:starvation induced dna binding protein; PDBTitle: x-ray structure of dpsa from thermosynechococcus elongatus 45 d1z6oa1 not modelled 99.9 17 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 46 c1yuzB_ not modelled 99.9 13 PDB header:oxidoreductase Chain: B: PDB Molecule:nigerythrin; PDBTitle: partially reduced state of nigerythrin 47 c2wlaA_ not modelled 99.9 18 PDB header:oxidoreductase Chain: A: PDB Molecule:dps-like peroxide resistance protein; PDBTitle: streptococcus pyogenes dpr 48 d1vela_ not modelled 99.9 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 49 c2xgwA_ not modelled 99.9 18 PDB header:metal binding protein Chain: A: PDB Molecule:peroxide resistance protein; PDBTitle: zinc-bound crystal structure of streptococcus pyogenes dpr 50 d1ji4a_ not modelled 99.9 17 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 51 c2hr5B_ not modelled 99.9 14 PDB header:metal binding protein Chain: B: PDB Molecule:rubrerythrin; PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form 52 c2c6rA_ not modelled 99.9 13 PDB header:dna-binding protein Chain: A: PDB Molecule:dna-binding stress response protein, dps family; PDBTitle: fe-soaked crystal structure of the dps92 from deinococcus2 radiodurans 53 d1dpsa_ not modelled 99.9 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 54 d2bk6a1 not modelled 99.9 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 55 c3kwoA_ not modelled 99.9 11 PDB header:oxidoreductase Chain: A: PDB Molecule:putative bacterioferritin; PDBTitle: crystal structure of putative bacterioferritin from2 campylobacter jejuni 56 d2fjca1 not modelled 99.9 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 57 d1umna_ not modelled 99.9 19 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 58 d1bg7a_ not modelled 99.9 23 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 59 c2f7nA_ not modelled 99.9 16 PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding stress response protein, dps family; PDBTitle: structure of d. radiodurans dps-1 60 d2yw6a1 not modelled 99.9 17 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 61 c2z90D_ not modelled 99.9 12 PDB header:dna binding protein Chain: D: PDB Molecule:starvation-inducible dna-binding protein or fine PDBTitle: crystal structure of the second dps from mycobacterium2 smegmatis 62 c2yjkF_ not modelled 99.9 14 PDB header:metal-binding protein Chain: F: PDB Molecule:afp; PDBTitle: structure of dps from microbacterium arborescens in the2 high iron form 63 c3oghB_ not modelled 99.9 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ycie; PDBTitle: crystal structure of ycie protein from e. coli cft073, a member of2 ferritine-like superfamily of diiron-containing four-helix-bundle3 proteins 64 c3qhbA_ not modelled 99.9 14 PDB header:metal transport Chain: A: PDB Molecule:symerythrin; PDBTitle: crystal structure of oxidized symerythrin from cyanophora paradoxa 65 c2pybC_ not modelled 99.9 16 PDB header:metal transport Chain: C: PDB Molecule:neutrophil activating protein; PDBTitle: napa protein from borrelia burgdorferi 66 d2oh3a1 not modelled 99.9 18 Fold:Ferritin-like Superfamily:Ferritin-like Family:AMB4284-like 67 d1jkva_ not modelled 99.8 21 Fold:Ferritin-like Superfamily:Ferritin-like Family:Manganese catalase (T-catalase) 68 d2fzfa1 not modelled 99.7 17 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 69 d1zs3a1 not modelled 99.7 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 70 d1zuja1 not modelled 99.6 12 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 71 d2cwla1 not modelled 99.6 19 Fold:Ferritin-like Superfamily:Ferritin-like Family:Manganese catalase (T-catalase) 72 d1vjxa_ not modelled 99.6 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 73 d2ib0a1 not modelled 99.3 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Rv2844-like 74 c2ib0A_ not modelled 99.3 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical alanine rich protein; PDBTitle: crystal structure of a conserved hypothetical protein, rv2844, from2 mycobacterium tuberculosis 75 c3hiuB_ not modelled 99.3 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of protein (xcc3681) from xanthomonas2 campestris pv. campestris str. atcc 33913 76 c3q4nA_ not modelled 99.2 15 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein mj0754; PDBTitle: crystal structure of hypothetical protein mj0754 from methanococcus2 jannaschii dsm 2661 77 d2gs4a1 not modelled 98.8 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:YciF-like 78 d2gyqa1 not modelled 98.8 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:YciF-like 79 d1za0a1 not modelled 98.0 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 80 d1zpya1 not modelled 97.9 24 Fold:Ferritin-like Superfamily:Ferritin-like Family:half-ferritin 81 c3hl1B_ not modelled 97.8 14 PDB header:metal binding protein Chain: B: PDB Molecule:ferritin like protein; PDBTitle: crystal structure of a ferritin like protein (cc_0557) from2 caulobacter vibrioides at 1.95 a resolution 82 d2inca1 not modelled 97.7 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 83 c3dhiA_ not modelled 97.7 17 PDB header:oxidoreductase Chain: A: PDB Molecule:toluene 4-monooxygenase hydroxylase alpha subunit; PDBTitle: crystal structure of reduced toluene 4-monoxygenase hydroxylase2 complexed with effector protein 84 d1afra_ not modelled 97.5 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 85 c1u7mB_ not modelled 97.4 40 PDB header:de novo protein Chain: B: PDB Molecule:four-helix bundle model; PDBTitle: solution structure of a diiron protein model: due ferri(ii)2 turn mutant 86 c3fseB_ not modelled 97.2 16 PDB header:hydrolase Chain: B: PDB Molecule:two-domain protein containing dj-1/thij/pfpi-like and PDBTitle: crystal structure of a two-domain protein containing dj-1/thij/pfpi-2 like and ferritin-like domains (ava_4496) from anabaena variabilis3 atcc 29413 at 1.90 a resolution 87 d2oc5a1 not modelled 97.2 18 Fold:Ferritin-like Superfamily:Ferritin-like Family:PMT1231-like 88 c1lt1G_ not modelled 97.0 52 PDB header:de novo protein Chain: G: PDB Molecule:l13g-df1; PDBTitle: sliding helix induced change of coordination geometry in a2 model di-mn(ii) protein 89 d2itba1 not modelled 96.9 10 Fold:Ferritin-like Superfamily:Ferritin-like Family:MiaE-like 90 c3dhgB_ not modelled 96.7 13 PDB header:oxidoreductase Chain: B: PDB Molecule:toluene 4-monooxygenase hydroxylase beta subunit; PDBTitle: crystal struture of toluene 4-monoxygenase hydroxylase 91 d2incb1 not modelled 96.6 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 92 c2vuxB_ not modelled 95.4 13 PDB header:oxidoreductase Chain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit m2 b; PDBTitle: human ribonucleotide reductase, subunit m2 b 93 d1mhyd_ not modelled 95.1 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 94 c2innA_ not modelled 95.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:phenol hydroxylase component phn; PDBTitle: structure of the phenol hydroxyalse-regulatory protein2 complex 95 d1otka_ not modelled 94.4 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 96 d1mtyd_ not modelled 93.9 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 97 c2hz8A_ not modelled 92.6 20 PDB header:de novo protein Chain: A: PDB Molecule:de novo designed diiron protein; PDBTitle: qm/mm structure refined from nmr-structure of a single2 chain diiron protein 98 c3ez0D_ not modelled 92.6 19 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:uncharacterized protein with ferritin-like fold; PDBTitle: crystal structure of protein of unknown function with ferritin-like2 fold (yp_832262.1) from arthrobacter sp. fb24 at 2.33 a resolution 99 c3ee4A_ not modelled 91.7 11 PDB header:oxidoreductase Chain: A: PDB Molecule:probable ribonucleoside-diphosphate reductase; PDBTitle: r2-like ligand binding mn/fe oxidase from m. tuberculosis 100 c3pw1A_ not modelled 91.6 11 PDB header:oxidoreductase Chain: A: PDB Molecule:phenylacetic acid degradation protein paaa; PDBTitle: the phenylacetyl-coa monooxygenase paaac subcomplex with phenylacetyl-2 coa 101 c3ddeB_ not modelled 90.9 9 PDB header:unknown function Chain: B: PDB Molecule:tena/thi-4 protein, domain of unknown function with a heme PDBTitle: crystal structure of a domain of unknown function with a heme2 oxygenase-like fold (sden_3740) from shewanella denitrificans os2173 at 2.30 a resolution 102 c3bt5A_ not modelled 87.2 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein duf305; PDBTitle: crystal structure of duf305 fragment from deinococcus2 radiodurans 103 d1uzra_ not modelled 86.9 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 104 c2rccC_ not modelled 86.0 17 PDB header:oxidoreductase Chain: C: PDB Molecule:ribonucleoside-diphosphate reductase subunit beta; PDBTitle: crystal structure of putative class i ribonucleotide reductase2 (np_241368.1) from bacillus halodurans at 1.90 a resolution 105 c3hf1B_ not modelled 85.7 15 PDB header:oxidoreductase Chain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit m2 PDBTitle: crystal structure of human p53r2 106 c1h0oA_ not modelled 85.5 13 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase; PDBTitle: cobalt substitution of mouse r2 ribonucleotide reductase to2 model the reactive diferrous state 107 d1smsa_ not modelled 84.8 18 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 108 d1mxra_ not modelled 84.7 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 109 c2qf9B_ not modelled 84.4 7 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative secreted protein; PDBTitle: crystal structure of putative secreted protein duf305 from2 streptomyces coelicolor 110 c2p1iA_ not modelled 84.2 17 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleotide reductase, small chain; PDBTitle: plasmodium yoelii ribonucleotide reductase subunit r2 (py03671) 111 c2o1zA_ not modelled 83.7 17 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleotide reductase subunit r2; PDBTitle: plasmodium vivax ribonucleotide reductase subunit r22 (pv086155) 112 c2rbdB_ not modelled 81.9 9 PDB header:structural protein Chain: B: PDB Molecule:bh2358 protein; PDBTitle: crystal structure of a putative spore coat protein (bh2358) from2 bacillus halodurans c-125 at 1.54 a resolution 113 d1jk0b_ not modelled 81.0 17 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 114 c2inpD_ not modelled 80.4 12 PDB header:oxidoreductase Chain: D: PDB Molecule:phenol hydroxylase component phl; PDBTitle: structure of the phenol hydroxylase-regulatory protein2 complex 115 c1yfdA_ not modelled 79.0 15 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase 1 beta PDBTitle: crystal structure of the y122h mutant of ribonucleotide2 reductase r2 protein from e. coli 116 d1w68a_ not modelled 79.0 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 117 c1syyA_ not modelled 70.9 16 PDB header:replication,oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase beta chain; PDBTitle: crystal structure of the r2 subunit of ribonucleotide reductase from2 chlamydia trachomatis 118 d1syya_ not modelled 70.9 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 119 d1oquc_ not modelled 67.5 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 120 d3dhza1 not modelled 67.1 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0