Fold library entry viewer: d1smsa_

Added to library: Tue Mar 16 13:06:29 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	H	N	Q	F	L	K	T	F	Q	K	E	R	H	D	M	K	E	A	E	K	D	E	I	L	L	M	E	N	S	R	R	F	V	M	F	P	I	K	Y	H	E	I	W	A	A	Y	K	K	V	E	A	S	F	W	T	A	E	E	I	E	L	A	K	D	T	E	D	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T	T	T								T	T		G	G	G				S		S	S			S	S		S														T				G	G	G				S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	T	D	D	Q	K	T	Y	I	G	N	L	L	A	L	S	I	S	S	D	N	L	V	N	K	Y	L	I	E	N	F	S	A	Q	L	Q	N	P	E	G	K	S	F	Y	G	F	Q	I	M	M	E	N	I	Y	S	E	V	Y	S	M	M	V	D	A	F	F	K	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S															T	T																																																S		G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	N	I	P	L	F	K	E	I	A	N	L	P	E	V	K	H	K	A	A	F	I	E	R	W	I	S	N	D	D	S	L	Y	A	E	R	L	V	A	F	A	A	K	E	G	I	F	Q	A	G	N	Y	A	S	M	F	W	L	T	D	K	K	I	M	P	G	L	A	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		S	S	T	T		S	T	T															S	S		S	S																T	T	T												T	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	R	N	I	C	R	D	R	G	A	Y	T	D	F	S	C	L	L	F	A	H	L	R	T	K	P	N	P	K	I	I	E	K	I	I	T	E	A	V	E	I	E	K	E	Y	Y	S	N	S	L	P	V	E	K	F	G	M	D	L	K	S	I	H	T	Y	I	E	F	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T		S	S																								T	T	S		S	T	T	T	T	S		T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Sequence	D	G	L	L	Q	G	F	G	N	E	K	Y	Y	N	A	V	N	P	F	E	F	M	E	F	F	E	K	K	V	S	D	Y	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S				S	S						S													T	T

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PDB structure

FASTA sequence

Hidden Markov model

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