PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ddeB_

Fold library id	PDB Header	Molecule	Title
c3ddeB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: tena/thi-4 protein, domain of unknown function	PDBTitle: crystal structure of domain of unknown function with a heme2 oxygenase-like fold (yp_564736.1) from shewanella3 denitrificans os-217 at 2.30 a resolution

Links to external resources
Added to library: Tue Mar 16 13:53:50 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S I I D L T K L E Q K V A T X W D S I L T N S P F I H E V L D G K A T K A L Y A I Y X T E T Y H Y T K H N A K N Q A L V G I X G K D L P G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y L S F C F H H A H E E A G H E L X A L S D I A S I G F D R E D V L S S K P L P A T E T L I A Y L Y W I S A T G N P V Q R L G Y S Y W A E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
T
S S
G G G T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V Y G Y I D P V L K A I Q S T L D L T P Q S X K F F I A H S K I D A K H A E E V N E X L H E V C K T Q E D V D S V V A V X E N S L V L T A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G G T S
S

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence I L D D V W K E Y Q L F Q S G A S D R Y A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	I	I	D	L	T	K	L	E	Q	K	V	A	T	X	W	D	S	I	L	T	N	S	P	F	I	H	E	V	L	D	G	K	A	T	K	A	L	Y	A	I	Y	X	T	E	T	Y	H	Y	T	K	H	N	A	K	N	Q	A	L	V	G	I	X	G	K	D	L	P	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																															T	T																			T	T													S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	L	S	F	C	F	H	H	A	H	E	E	A	G	H	E	L	X	A	L	S	D	I	A	S	I	G	F	D	R	E	D	V	L	S	S	K	P	L	P	A	T	E	T	L	I	A	Y	L	Y	W	I	S	A	T	G	N	P	V	Q	R	L	G	Y	S	Y	W	A	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T											T	T								T																				S	S		G	G	G									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	Y	G	Y	I	D	P	V	L	K	A	I	Q	S	T	L	D	L	T	P	Q	S	X	K	F	F	I	A	H	S	K	I	D	A	K	H	A	E	E	V	N	E	X	L	H	E	V	C	K	T	Q	E	D	V	D	S	V	V	A	V	X	E	N	S	L	V	L	T	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T			G	G	G	G					T	S																					S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	I	L	D	D	V	W	K	E	Y	Q	L	F	Q	S	G	A	S	D	R	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T		T	T	S