Email l.a.kelley@imperial.ac.uk Description P0A805 Date Thu Jan 5 11:06:33 GMT 2012 Unique Job ID e8ae0d75f363c17d

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ek8a_ 100.0 100 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 2 d1dd5a_ 100.0 40 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 3 d1is1a_ 100.0 70 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 4 d1wqga1 100.0 40 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 5 d1eh1a_ 100.0 45 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 6 d1ge9a_ 100.0 46 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 7 c3lf9A_ 100.0 63 PDB header:immune system Chain: A: PDB Molecule:4e10_d0_1is1a_001_c (t161); PDBTitle: crystal structure of hiv epitope-scaffold 4e10_d0_1is1a_001_c 8 c1y698_ 100.0 74 PDB header:ribosome Chain: 8: PDB Molecule:ribosome recycling factor; PDBTitle: rrf domain i in complex with the 50s ribosomal subunit from2 deinococcus radiodurans 9 d1wiha_ 99.9 31 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 10 c2rrnA_ 69.8 17 PDB header:protein transport Chain: A: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: solution structure of secdf periplasmic domain p4 11 c2c1nA_ 66.2 15 PDB header:signaling protein Chain: A: PDB Molecule:14-3-3 protein zeta/delta; PDBTitle: molecular basis for the recognition of phosphorylated and2 phosphoacetylated histone h3 by 14-3-3 12 d1in0a2 65.5 19 Fold:Ferredoxin-like Superfamily:YajQ-like Family:YajQ-like 13 c1in0B_ 58.8 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:yajq protein; PDBTitle: yajq protein (hi1034) 14 d1o9da_ 56.7 16 Fold:alpha-alpha superhelix Superfamily:14-3-3 protein Family:14-3-3 protein 15 c2npmB_ 56.2 11 PDB header:protein binding Chain: B: PDB Molecule:14-3-3 domain containing protein; PDBTitle: crystal structure of cryptosporidium parvum 14-3-3 protein2 in complex with peptide 16 c3gasA_ 52.2 11 PDB header:oxidoreductase Chain: A: PDB Molecule:heme oxygenase; PDBTitle: crystal structure of helicobacter pylori heme oxygenase hugz2 in complex with heme 17 d2o8pa1 48.5 13 Fold:alpha-alpha superhelix Superfamily:14-3-3 protein Family:14-3-3 protein 18 d1iwga5 47.9 23 Fold:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Superfamily:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Family:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 19 d2o02a1 47.8 15 Fold:alpha-alpha superhelix Superfamily:14-3-3 protein Family:14-3-3 protein 20 d1iwga6 46.9 22 Fold:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Superfamily:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Family:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 21 c3ff5B_ not modelled 46.5 23 PDB header:protein transport Chain: B: PDB Molecule:peroxisomal biogenesis factor 14; PDBTitle: crystal structure of the conserved n-terminal domain of the2 peroxisomal matrix-protein-import receptor, pex14p 22 c3m20A_ not modelled 43.5 14 PDB header:isomerase Chain: A: PDB Molecule:4-oxalocrotonate tautomerase, putative; PDBTitle: crystal structure of dmpi from archaeoglobus fulgidus determined to2 2.37 angstroms resolution 23 c3htkA_ not modelled 41.2 23 PDB header:recombination/replication/ligase Chain: A: PDB Molecule:structural maintenance of chromosomes protein 5; PDBTitle: crystal structure of mms21 and smc5 complex 24 c2kl8A_ not modelled 36.1 15 PDB header:de novo protein Chain: A: PDB Molecule:or15; PDBTitle: solution nmr structure of de novo designed ferredoxin-like2 fold protein, northeast structural genomics consortium3 target or15 25 c1j1dF_ not modelled 34.0 14 PDB header:contractile protein Chain: F: PDB Molecule:troponin i; PDBTitle: crystal structure of the 46kda domain of human cardiac2 troponin in the ca2+ saturated form 26 d1zj8a1 not modelled 32.7 9 Fold:Ferredoxin-like Superfamily:Nitrite/Sulfite reductase N-terminal domain-like Family:Duplicated SiR/NiR-like domains 1 and 3 27 d1tz9a_ not modelled 30.0 14 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:UxuA-like 28 d1zh5a1 not modelled 27.3 32 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:La domain 29 c3mafB_ not modelled 27.2 16 PDB header:lyase Chain: B: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of stspl (asymmetric form) 30 d1lp1b_ not modelled 26.0 30 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 31 c2k14A_ not modelled 25.9 10 PDB header:unknown function Chain: A: PDB Molecule:yuaf protein; PDBTitle: solution structure of the soluble domain of the nfed2 protein yuaf from bacillus subtilis 32 c3mc6C_ not modelled 25.6 7 PDB header:lyase Chain: C: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of scdpl1 33 d1fc2c_ not modelled 25.4 30 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 34 c3bdkB_ not modelled 25.3 20 PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue 35 d1deeg_ not modelled 24.8 15 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 36 c3onjA_ not modelled 24.4 24 PDB header:protein transport Chain: A: PDB Molecule:t-snare vti1; PDBTitle: crystal structure of yeast vti1p_habc domain 37 d2jwda1 not modelled 24.2 21 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 38 c1zdbA_ not modelled 21.1 35 PDB header:igg binding domain Chain: A: PDB Molecule:mini protein a domain, z38; PDBTitle: phage-selected mini protein a domain, z38, nmr, minimized2 mean structure 39 d2arza1 not modelled 20.8 19 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 40 d1r9ja1 not modelled 20.8 13 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:TK-like Pyr module 41 c3b50A_ not modelled 20.6 11 PDB header:transport protein Chain: A: PDB Molecule:sialic acid-binding periplasmic protein siap; PDBTitle: structure of h. influenzae sialic acid binding protein2 bound to neu5ac. 42 c3gyyC_ not modelled 20.3 12 PDB header:transport protein Chain: C: PDB Molecule:periplasmic substrate binding protein; PDBTitle: the ectoine binding protein of the teaabc trap transporter teaa in the2 apo-state 43 c2etnA_ not modelled 18.4 20 PDB header:transcription Chain: A: PDB Molecule:anti-cleavage anti-grea transcription factor PDBTitle: crystal structure of thermus aquaticus gfh1 44 c1mkyA_ not modelled 18.0 13 PDB header:ligand binding protein Chain: A: PDB Molecule:probable gtp-binding protein enga; PDBTitle: structural analysis of the domain interactions in der, a2 switch protein containing two gtpase domains 45 d2fqma1 not modelled 17.9 23 Fold:Phosphoprotein oligomerization domain-like Superfamily:Phosphoprotein oligomerization domain-like Family:Phosphoprotein oligomerization domain-like 46 d1b64a_ not modelled 17.7 18 Fold:Ferredoxin-like Superfamily:eEF-1beta-like Family:eEF-1beta-like 47 d2dula1 not modelled 17.1 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:TRM1-like 48 d2dexx2 not modelled 16.8 36 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Peptidylarginine deiminase Pad4, N-terminal domain 49 c2l5gB_ not modelled 16.1 19 PDB header:transcription regulator Chain: B: PDB Molecule:putative uncharacterized protein ncor2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207 50 c1j1eC_ not modelled 15.6 14 PDB header:contractile protein Chain: C: PDB Molecule:troponin i; PDBTitle: crystal structure of the 52kda domain of human cardiac2 troponin in the ca2+ saturated form 51 d2f23a1 not modelled 14.5 17 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 52 c3axtA_ not modelled 14.4 18 PDB header:transferase Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine 53 d1grja1 not modelled 13.9 19 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 54 c2zzxD_ not modelled 13.6 11 PDB header:transport protein Chain: D: PDB Molecule:abc transporter, solute-binding protein; PDBTitle: crystal structure of a periplasmic substrate binding protein in2 complex with lactate 55 c2b9bA_ not modelled 12.8 25 PDB header:viral protein Chain: A: PDB Molecule:fusion glycoprotein f0; PDBTitle: structure of the parainfluenza virus 5 f protein in its metastable,2 pre-fusion conformation 56 d1q8ka2 not modelled 12.6 16 Fold:Ferredoxin-like Superfamily:eIF-2-alpha, C-terminal domain Family:eIF-2-alpha, C-terminal domain 57 c2vpnB_ not modelled 12.6 9 PDB header:transport Chain: B: PDB Molecule:periplasmic substrate binding protein; PDBTitle: high-resolution structure of the periplasmic ectoine-2 binding protein from teaabc trap-transporter of halomonas3 elongata 58 c2pfyA_ not modelled 12.4 13 PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of dctp7, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid 59 d1whra_ not modelled 12.2 21 Fold:IF3-like Superfamily:R3H domain Family:R3H domain 60 c3nqbB_ not modelled 11.9 17 PDB header:hydrolase Chain: B: PDB Molecule:adenine deaminase 2; PDBTitle: crystal structure of adenine deaminase from agrobacterium tumefaciens2 (str. c 58) 61 c2wxxC_ not modelled 11.5 24 PDB header:hormone Chain: C: PDB Molecule:angiotensinogen; PDBTitle: crystal structure of mouse angiotensinogen in the oxidised form 62 c3fxbB_ not modelled 11.4 9 PDB header:transport protein Chain: B: PDB Molecule:trap dicarboxylate transporter, dctp subunit; PDBTitle: crystal structure of the ectoine-binding protein ueha 63 d1scfa_ not modelled 11.3 17 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Short-chain cytokines 64 c1scfA_ not modelled 11.3 17 PDB header:hormone/growth factor Chain: A: PDB Molecule:stem cell factor; PDBTitle: human recombinant stem cell factor 65 c3b4uB_ not modelled 11.1 25 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 66 c1x4rA_ not modelled 10.9 23 PDB header:apoptosis Chain: A: PDB Molecule:parp14 protein; PDBTitle: solution structure of wwe domain in parp14 protein 67 c3fkkA_ not modelled 10.9 33 PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase 68 c2pfzA_ not modelled 10.8 10 PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of dctp6, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid 69 d2i52a1 not modelled 10.8 16 Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like 70 d2akja1 not modelled 10.8 20 Fold:Ferredoxin-like Superfamily:Nitrite/Sulfite reductase N-terminal domain-like Family:Duplicated SiR/NiR-like domains 1 and 3 71 c2p4vA_ not modelled 10.7 16 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 72 c1yv0I_ not modelled 10.7 16 PDB header:contractile protein Chain: I: PDB Molecule:troponin i, fast skeletal muscle; PDBTitle: crystal structure of skeletal muscle troponin in the ca2+-2 free state 73 d1vcsa1 not modelled 10.7 20 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins 74 c3f9tB_ not modelled 10.4 13 PDB header:lyase Chain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution 75 d1s0aa_ not modelled 10.3 15 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 76 d2ieca1 not modelled 10.2 19 Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like 77 d2qsba1 not modelled 9.7 37 Fold:Bromodomain-like Superfamily:Ta0600-like Family:Ta0600-like 78 d1lfup_ not modelled 9.4 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 79 c3okgB_ not modelled 9.4 24 PDB header:dna binding protein Chain: B: PDB Molecule:restriction endonuclease s subunits; PDBTitle: crystal structure of hsds subunit from thermoanaerobacter2 tengcongensis 80 d1elua_ not modelled 9.2 17 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 81 c3lciA_ not modelled 9.0 17 PDB header:lyase Chain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w 82 c3mb2J_ not modelled 9.0 10 PDB header:isomerase Chain: J: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - beta subunit; PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily 83 c3hz7A_ not modelled 8.8 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the sira-like protein (dsy4693) from2 desulfitobacterium hafniense, northeast structural genomics3 consortium target dhr2a 84 d1edla_ not modelled 8.5 15 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 85 d2qzga1 not modelled 8.5 32 Fold:Bromodomain-like Superfamily:Ta0600-like Family:Ta0600-like 86 c2hl2A_ not modelled 8.4 15 PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase; PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase from pyrococcus abyssi in complex with an3 analog of seryladenylate 87 c3gabC_ not modelled 8.4 12 PDB header:hydrolase Chain: C: PDB Molecule:dna mismatch repair protein mutl; PDBTitle: c-terminal domain of bacillus subtilis mutl crystal form i 88 c3e6yB_ not modelled 8.3 17 PDB header:signaling protein Chain: B: PDB Molecule:14-3-3-like protein c; PDBTitle: structure of 14-3-3 in complex with the differentiation-inducing agent2 cotylenin a 89 c2ql8A_ not modelled 8.3 12 PDB header:oxidoreductase Chain: A: PDB Molecule:putative redox protein; PDBTitle: crystal structure of a putative redox protein (lsei_0423) from2 lactobacillus casei atcc 334 at 1.50 a resolution 90 c1q2iA_ not modelled 8.2 41 PDB header:antitumor protein Chain: A: PDB Molecule:pnc27; PDBTitle: nmr solution structure of a peptide from the mdm-2 binding2 domain of the p53 protein that is selectively cytotoxic to3 cancer cells 91 d1qtwa_ not modelled 8.2 7 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Endonuclease IV 92 c2l5qA_ not modelled 8.1 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of bvu_3817 from bacteroides vulgatus,2 northeast structural genomics consortium target bvr159 93 c1grjA_ not modelled 8.1 18 PDB header:transcription regulation Chain: A: PDB Molecule:grea protein; PDBTitle: grea transcript cleavage factor from escherichia coli 94 c1kmiZ_ not modelled 7.9 26 PDB header:signaling protein Chain: Z: PDB Molecule:chemotaxis protein chez; PDBTitle: crystal structure of an e.coli chemotaxis protein, chez 95 c2x7vA_ not modelled 7.9 9 PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc 96 c2y7cA_ not modelled 7.9 19 PDB header:transferase Chain: A: PDB Molecule:type-1 restriction enzyme ecoki specificity protein; PDBTitle: atomic model of the ocr-bound methylase complex from the2 type i restriction-modification enzyme ecoki (m2s1). based3 on fitting into em map 1534. 97 c2ogfD_ not modelled 7.8 13 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein mj0408; PDBTitle: crystal structure of protein mj0408 from methanococcus jannaschii,2 pfam duf372 98 c3g0sA_ not modelled 7.7 21 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2 99 d1qo5b_ not modelled 7.6 29 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase