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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3b50A_

Fold library idPDB HeaderMoleculeTitle
c3b50A_PDB header: transport proteinChain: A: PDB Molecule: sialic acid-binding periplasmic protein siap;PDBTitle: structure of h. influenzae sialic acid binding protein2 bound to neu5ac.


Added to library: Tue Mar 16 12:36:50 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESAR
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Known secondary structure (DSSP)


SS
TTSTTTS
TTTT

TS


GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence FQLFYPEAAVFALPYVISNYNVAQKALFDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIAD
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Known secondary structure (DSSP) GGGTSGGGGGGGSTTTS
SSS
SS


SGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence MKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHI
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Known secondary structure (DSSP) GTT

S
TT


GGGTTSSSTTGGGS
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence LNDQLYLVSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKESMK
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Known secondary structure (DSSP) TTS
TT



ST
 .........290.........300.........310
Sequence PYYAEFVKQTGQKGESALKQIEAINPKGEA
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Known secondary structure (DSSP) TS
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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