Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP39349
DateThu Jan 5 11:59:38 GMT 2012
Unique Job IDd9c9c87fcde0d6d0

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2w8dB_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2;
PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis
Confidence and coverage
Confidence:100.0% Coverage: 83%
309 residues ( 83% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MNRPVFPVYHFLVSAAILVFVVIFWRTHHRDHRNWLALRLFVLCSVNRWPLRMVKGTVVG
Secondary structure 





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   .........70.........80.........90.........100.........110.........120
Sequence  TTDTLREMQRYEQLSSTGLTTGKSSRXAPLYDTIVIVTGESVRRDYMSVYDYPVPTTPWL
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   .........130.........140.........150.........160.........170.........180
Sequence  NTAPGLFIDDYTSTASSTVSSLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKL
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   .........190.........200.........210.........220.........230.........240
Sequence  GEHDTRISVIASDAEHATFLKKGSFASRKTDDKLLLQETERALADTSSPKIIFLHMMGSH
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   .........250.........260.........270.........280.........290.........300
Sequence  PNPCDSLNSXPNNYLEQYPRKIACYLASISKLDNFLGQLDGILRRYSRHFAMLYFSGLGL
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?
??










































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   .........310.........320.........330.........340.........350.........360
Sequence  SVSDSANPVHHYGHVQGGYSVPLIITASDITSHQPVSRKISARHFAGIFQWMTGICTENI
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Disorder 
?????

???
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???
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   .........370.
Sequence  PPFNPLTDEDN
Secondary structure 










SS confidence 










Disorder  ???????????
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2w8d chain B

3D model

Region: 62 - 371
Aligned: 309
Modelled: 299
Confidence: 100.0%
Identity: 12%
PDB header:transferase
Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2;
PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis

Phyre2

PDB 2w5t chain A

3D model

Region: 65 - 369
Aligned: 304
Modelled: 304
Confidence: 100.0%
Identity: 12%
PDB header:transferase
Chain: A: PDB Molecule:processed glycerol phosphate lipoteichoic acid
PDBTitle: structure-based mechanism of lipoteichoic acid synthesis by2 staphylococcus aureus ltas.

Phyre2

PDB 2qzu chain A

3D model

Region: 84 - 367
Aligned: 283
Modelled: 269
Confidence: 100.0%
Identity: 13%
PDB header:hydrolase
Chain: A: PDB Molecule:putative sulfatase yidj;
PDBTitle: crystal structure of the putative sulfatase yidj from bacteroides2 fragilis. northeast structural genomics consortium target bfr123

Phyre2

PDB 3ed4 chain A

3D model

Region: 91 - 367
Aligned: 277
Modelled: 277
Confidence: 100.0%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:arylsulfatase;
PDBTitle: crystal structure of putative arylsulfatase from escherichia coli

Phyre2

PDB 3lxq chain B

3D model

Region: 81 - 369
Aligned: 276
Modelled: 271
Confidence: 100.0%
Identity: 15%
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein vp1736;
PDBTitle: the crystal structure of a protein in the alkaline2 phosphatase superfamily from vibrio parahaemolyticus to3 1.95a

Phyre2

PDB 1auk chain A

3D model

Region: 90 - 367
Aligned: 270
Modelled: 270
Confidence: 100.0%
Identity: 15%
Fold: Alkaline phosphatase-like
Superfamily: Alkaline phosphatase-like
Family: Arylsulfatase

Phyre2

PDB 1fsu chain A

3D model

Region: 89 - 367
Aligned: 275
Modelled: 275
Confidence: 100.0%
Identity: 14%
Fold: Alkaline phosphatase-like
Superfamily: Alkaline phosphatase-like
Family: Arylsulfatase

Phyre2

PDB 3b5q chain B

3D model

Region: 90 - 367
Aligned: 276
Modelled: 268
Confidence: 100.0%
Identity: 12%
PDB header:hydrolase
Chain: B: PDB Molecule:putative sulfatase yidj;
PDBTitle: crystal structure of a putative sulfatase (np_810509.1)2 from bacteroides thetaiotaomicron vpi-5482 at 2.40 a3 resolution

Phyre2

PDB 1hdh chain A

3D model

Region: 90 - 369
Aligned: 277
Modelled: 277
Confidence: 100.0%
Identity: 19%
Fold: Alkaline phosphatase-like
Superfamily: Alkaline phosphatase-like
Family: Arylsulfatase

Phyre2

PDB 2vqr chain A

3D model

Region: 91 - 367
Aligned: 276
Modelled: 276
Confidence: 100.0%
Identity: 16%
PDB header:hydrolase
Chain: A: PDB Molecule:putative sulfatase;
PDBTitle: crystal structure of a phosphonate monoester hydrolase2 from rhizobium leguminosarum: a new member of the3 alkaline phosphatase superfamily

Phyre2

PDB 1p49 chain A

3D model

Region: 88 - 367
Aligned: 272
Modelled: 272
Confidence: 100.0%
Identity: 15%
Fold: Alkaline phosphatase-like
Superfamily: Alkaline phosphatase-like
Family: Arylsulfatase

Phyre2

PDB 1o98 chain A domain 2

3D model

Region: 91 - 367
Aligned: 255
Modelled: 263
Confidence: 100.0%
Identity: 9%
Fold: Alkaline phosphatase-like
Superfamily: Alkaline phosphatase-like
Family: 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain

Phyre2

PDB 2zkt chain B

3D model

Region: 91 - 359
Aligned: 246
Modelled: 246
Confidence: 100.0%
Identity: 16%
PDB header:isomerase
Chain: B: PDB Molecule:2,3-bisphosphoglycerate-independent phosphoglycerate
PDBTitle: structure of ph0037 protein from pyrococcus horikoshii

Phyre2

PDB 3m8y chain C

3D model

Region: 90 - 369
Aligned: 251
Modelled: 267
Confidence: 100.0%
Identity: 14%
PDB header:isomerase
Chain: C: PDB Molecule:phosphopentomutase;
PDBTitle: phosphopentomutase from bacillus cereus after glucose-1,6-bisphosphate2 activation

Phyre2

PDB 2i09 chain A domain 1

3D model

Region: 89 - 368
Aligned: 234
Modelled: 234
Confidence: 100.0%
Identity: 14%
Fold: Alkaline phosphatase-like
Superfamily: Alkaline phosphatase-like
Family: DeoB catalytic domain-like

Phyre2

PDB 3q3q chain A

3D model

Region: 84 - 359
Aligned: 261
Modelled: 261
Confidence: 100.0%
Identity: 16%
PDB header:hydrolase
Chain: A: PDB Molecule:alkaline phosphatase;
PDBTitle: crystal structure of spap: an novel alkaline phosphatase from2 bacterium sphingomonas sp. strain bsar-1

Phyre2

PDB 2gso chain B

3D model

Region: 90 - 367
Aligned: 248
Modelled: 248
Confidence: 100.0%
Identity: 14%
PDB header:hydrolase
Chain: B: PDB Molecule:phosphodiesterase-nucleotide pyrophosphatase;
PDBTitle: structure of xac nucleotide2 pyrophosphatase/phosphodiesterase in complex with vanadate

Phyre2

PDB 2i09 chain A

3D model

Region: 89 - 367
Aligned: 253
Modelled: 266
Confidence: 99.9%
Identity: 11%
PDB header:isomerase
Chain: A: PDB Molecule:phosphopentomutase;
PDBTitle: crystal structure of putative phosphopentomutase from streptococcus2 mutans

Phyre2

PDB 2xrg chain A

3D model

Region: 81 - 356
Aligned: 230
Modelled: 230
Confidence: 99.9%
Identity: 15%
PDB header:hydrolase
Chain: A: PDB Molecule:ectonucleotide pyrophosphatase/phosphodiesterase family
PDBTitle: crystal structure of autotaxin (enpp2) in complex with the2 ha155 boronic acid inhibitor

Phyre2

PDB 2xr9 chain A

3D model

Region: 81 - 356
Aligned: 228
Modelled: 228
Confidence: 99.9%
Identity: 16%
PDB header:hydrolase
Chain: A: PDB Molecule:ectonucleotide pyrophosphatase/phosphodiesterase family
PDBTitle: crystal structure of autotaxin (enpp2)

Phyre2
1

c2w8dB_
2

c2w5tA_
3

c2qzuA_
4

c3ed4A_
5

c3lxqB_
6

d1auka_
7

d1fsua_
8

c3b5qB_
9

d1hdha_
10

c2vqrA_
11

d1p49a_
12

d1o98a2
13

c2zktB_
14

c3m8yC_
15

d2i09a1
16

c3q3qA_
17

c2gsoB_
18

c2i09A_
19

c2xrgA_
20

c2xr9A_
21



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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2w8dB_



100.0 12 PDB header:transferase
Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2;
PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis
2c2w5tA_



100.0 12 PDB header:transferase
Chain: A: PDB Molecule:processed glycerol phosphate lipoteichoic acid
PDBTitle: structure-based mechanism of lipoteichoic acid synthesis by2 staphylococcus aureus ltas.
3c2qzuA_



100.0 13 PDB header:hydrolase
Chain: A: PDB Molecule:putative sulfatase yidj;
PDBTitle: crystal structure of the putative sulfatase yidj from bacteroides2 fragilis. northeast structural genomics consortium target bfr123
4c3ed4A_



100.0 18 PDB header:transferase
Chain: A: PDB Molecule:arylsulfatase;
PDBTitle: crystal structure of putative arylsulfatase from escherichia coli
5c3lxqB_



100.0 15 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein vp1736;
PDBTitle: the crystal structure of a protein in the alkaline2 phosphatase superfamily from vibrio parahaemolyticus to3 1.95a
6d1auka_



100.0 15 Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Arylsulfatase
7d1fsua_



100.0 14 Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Arylsulfatase
8c3b5qB_



100.0 12 PDB header:hydrolase
Chain: B: PDB Molecule:putative sulfatase yidj;
PDBTitle: crystal structure of a putative sulfatase (np_810509.1)2 from bacteroides thetaiotaomicron vpi-5482 at 2.40 a3 resolution
9d1hdha_



100.0 19 Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Arylsulfatase
10c2vqrA_



100.0 16 PDB header:hydrolase
Chain: A: PDB Molecule:putative sulfatase;
PDBTitle: crystal structure of a phosphonate monoester hydrolase2 from rhizobium leguminosarum: a new member of the3 alkaline phosphatase superfamily
11d1p49a_



100.0 15 Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Arylsulfatase
12d1o98a2



100.0 9 Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
13c2zktB_



100.0 16 PDB header:isomerase
Chain: B: PDB Molecule:2,3-bisphosphoglycerate-independent phosphoglycerate
PDBTitle: structure of ph0037 protein from pyrococcus horikoshii
14c3m8yC_



100.0 14 PDB header:isomerase
Chain: C: PDB Molecule:phosphopentomutase;
PDBTitle: phosphopentomutase from bacillus cereus after glucose-1,6-bisphosphate2 activation
15d2i09a1



100.0 14 Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:DeoB catalytic domain-like
16c3q3qA_



100.0 16 PDB header:hydrolase
Chain: A: PDB Molecule:alkaline phosphatase;
PDBTitle: crystal structure of spap: an novel alkaline phosphatase from2 bacterium sphingomonas sp. strain bsar-1
17c2gsoB_



100.0 14 PDB header:hydrolase
Chain: B: PDB Molecule:phosphodiesterase-nucleotide pyrophosphatase;
PDBTitle: structure of xac nucleotide2 pyrophosphatase/phosphodiesterase in complex with vanadate
18c2i09A_



99.9 11 PDB header:isomerase
Chain: A: PDB Molecule:phosphopentomutase;
PDBTitle: crystal structure of putative phosphopentomutase from streptococcus2 mutans
19c2xrgA_



99.9 15 PDB header:hydrolase
Chain: A: PDB Molecule:ectonucleotide pyrophosphatase/phosphodiesterase family
PDBTitle: crystal structure of autotaxin (enpp2) in complex with the2 ha155 boronic acid inhibitor
20c2xr9A_



99.9 16 PDB header:hydrolase
Chain: A: PDB Molecule:ectonucleotide pyrophosphatase/phosphodiesterase family
PDBTitle: crystal structure of autotaxin (enpp2)
21c3szzA_



not modelled 99.9 18 PDB header:hydrolase
Chain: A: PDB Molecule:phosphonoacetate hydrolase;
PDBTitle: crystal structure of phosphonoacetate hydrolase from sinorhizobium2 meliloti 1021 in complex with acetate
22d1ei6a_



not modelled 99.9 16 Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Phosphonoacetate hydrolase
23c1o98A_



not modelled 99.7 13 PDB header:isomerase
Chain: A: PDB Molecule:2,3-bisphosphoglycerate-independent
PDBTitle: 1.4a crystal structure of phosphoglycerate mutase from2 bacillus stearothermophilus complexed with3 2-phosphoglycerate
24c3igzB_



not modelled 99.6 12 PDB header:isomerase
Chain: B: PDB Molecule:cofactor-independent phosphoglycerate mutase;
PDBTitle: crystal structures of leishmania mexicana phosphoglycerate2 mutase at low cobalt concentration
25c2d1gB_



not modelled 99.6 17 PDB header:hydrolase
Chain: B: PDB Molecule:acid phosphatase;
PDBTitle: structure of francisella tularensis acid phosphatase a (acpa) bound to2 orthovanadate
26c2iucB_



not modelled 99.4 16 PDB header:hydrolase
Chain: B: PDB Molecule:alkaline phosphatase;
PDBTitle: structure of alkaline phosphatase from the antarctic2 bacterium tab5
27d1y6va1



not modelled 99.3 12 Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Alkaline phosphatase
28c1ew2A_



not modelled 99.2 14 PDB header:hydrolase
Chain: A: PDB Molecule:phosphatase;
PDBTitle: crystal structure of a human phosphatase
29d1zeda1



not modelled 99.2 14 Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Alkaline phosphatase
30c2w0yB_



not modelled 99.1 12 PDB header:hydrolase
Chain: B: PDB Molecule:alkaline phosphatase;
PDBTitle: h.salinarum alkaline phosphatase
31d1k7ha_



not modelled 99.1 13 Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Alkaline phosphatase
32c2x98A_



not modelled 99.1 13 PDB header:hydrolase
Chain: A: PDB Molecule:alkaline phosphatase;
PDBTitle: h.salinarum alkaline phosphatase
33c3a52A_



not modelled 99.0 14 PDB header:hydrolase
Chain: A: PDB Molecule:cold-active alkaline phosphatase;
PDBTitle: crystal structure of cold-active alkailne phosphatase from2 psychrophile shewanella sp.
34c3e2dB_



not modelled 98.7 15 PDB header:hydrolase
Chain: B: PDB Molecule:alkaline phosphatase;
PDBTitle: the 1.4 a crystal structure of the large and cold-active2 vibrio sp. alkaline phosphatase
35c3iddA_



not modelled 96.7 20 PDB header:isomerase
Chain: A: PDB Molecule:2,3-bisphosphoglycerate-independent
PDBTitle: cofactor-independent phosphoglycerate mutase from2 thermoplasma acidophilum dsm 1728
36d1b4ub_



not modelled 42.4 5 Fold:Phosphorylase/hydrolase-like
Superfamily:LigB-like
Family:LigB-like
37c3bijC_



not modelled 38.2 18 PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized protein gsu0716;
PDBTitle: crystal structure of protein gsu0716 from geobacter2 sulfurreducens. northeast structural genomics target gsr13
38d1j33a_



not modelled 28.7 13 Fold:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Superfamily:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Family:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
39d1l5oa_



not modelled 24.9 7 Fold:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Superfamily:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Family:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
40c3ib7A_



not modelled 22.6 23 PDB header:hydrolase
Chain: A: PDB Molecule:icc protein;
PDBTitle: crystal structure of full length rv0805
41d1xo1a2



not modelled 22.6 12 Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
42d3c9fa2



not modelled 22.0 18 Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
43c2xokG_



not modelled 21.3 11 PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase subunit gamma, mitochondrial;
PDBTitle: refined structure of yeast f1c10 atpase complex to 3 a2 resolution
44c2hy1A_



not modelled 20.6 31 PDB header:hydrolase
Chain: A: PDB Molecule:rv0805;
PDBTitle: crystal structure of rv0805
45d2hy1a1



not modelled 20.6 31 Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:GpdQ-like
46c3e4cB_



not modelled 19.1 17 PDB header:hydrolase
Chain: B: PDB Molecule:caspase-1;
PDBTitle: procaspase-1 zymogen domain crystal strucutre
47d1s1qa_



not modelled 19.0 12 Fold:UBC-like
Superfamily:UBC-like
Family:UEV domain
48d1usha2



not modelled 16.9 11 Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
49d1uzdc1



not modelled 14.7 9 Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
50d1yj5a1



not modelled 13.1 26 Fold:HAD-like
Superfamily:HAD-like
Family:phosphatase domain of polynucleotide kinase
51d2p0va1



not modelled 12.2 11 Fold:alpha/alpha toroid
Superfamily:Six-hairpin glycosidases
Family:CPF0428-like
52c2p0vA_



not modelled 12.2 11 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein bt3781;
PDBTitle: crystal structure of bt3781 protein from bacteroides2 thetaiotaomicron, northeast structural genomics target3 btr58
53d1ej7s_



not modelled 12.0 11 Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
54d2z1aa2



not modelled 11.9 8 Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
55d1tfra2



not modelled 11.8 15 Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
56d2hrca1



not modelled 11.0 7 Fold:Chelatase-like
Superfamily:Chelatase
Family:Ferrochelatase
57c3uoaB_



not modelled 10.6 18 PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:mucosa-associated lymphoid tissue lymphoma translocation
PDBTitle: crystal structure of the malt1 paracaspase (p21 form)
58c2jcmA_



not modelled 9.1 14 PDB header:hydrolase
Chain: A: PDB Molecule:cytosolic purine 5'-nucleotidase;
PDBTitle: crystal structure of human cytosolic 5'-nucleotidase ii in2 complex with beryllium trifluoride
59d8ruci_



not modelled 8.9 11 Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
60c1oidA_



not modelled 8.9 10 PDB header:hydrolase
Chain: A: PDB Molecule:protein usha;
PDBTitle: 5'-nucleotidase (e. coli) with an engineered disulfide2 bridge (s228c, p513c)
61c2dfjA_



not modelled 8.3 8 PDB header:hydrolase
Chain: A: PDB Molecule:diadenosinetetraphosphatase;
PDBTitle: crystal structure of the diadenosine tetraphosphate2 hydrolase from shigella flexneri 2a
62d2jdig1



not modelled 7.7 17 Fold:Pyruvate kinase C-terminal domain-like
Superfamily:ATP synthase (F1-ATPase), gamma subunit
Family:ATP synthase (F1-ATPase), gamma subunit
63d1jb0i_



not modelled 7.2 23 Fold:Single transmembrane helix
Superfamily:Subunit VIII of photosystem I reaction centre, PsaI
Family:Subunit VIII of photosystem I reaction centre, PsaI
64d2hk6a1



not modelled 7.2 11 Fold:Chelatase-like
Superfamily:Chelatase
Family:Ferrochelatase
65c3a0hk_



not modelled 7.2 38 PDB header:electron transport
Chain: K: PDB Molecule:photosystem ii reaction center protein k;
PDBTitle: crystal structure of i-substituted photosystem ii complex
66d1yp2a2



not modelled 7.1 3 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
67d1cmwa2



not modelled 6.4 13 Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
68d2nxfa1



not modelled 6.1 14 Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:ADPRibase-Mn-like
69c3c9fB_



not modelled 6.0 18 PDB header:hydrolase
Chain: B: PDB Molecule:5'-nucleotidase;
PDBTitle: crystal structure of 5'-nucleotidase from candida albicans sc5314
70d1fs0g_



not modelled 5.8 20 Fold:Pyruvate kinase C-terminal domain-like
Superfamily:ATP synthase (F1-ATPase), gamma subunit
Family:ATP synthase (F1-ATPase), gamma subunit
71c3a0bK_



not modelled 5.7 38 PDB header:electron transport
Chain: K: PDB Molecule:photosystem ii reaction center protein k;
PDBTitle: crystal structure of br-substituted photosystem ii complex
72c3a0bk_



not modelled 5.7 38 PDB header:electron transport
Chain: K: PDB Molecule:photosystem ii reaction center protein k;
PDBTitle: crystal structure of br-substituted photosystem ii complex
73c2w6jG_



not modelled 5.7 17 PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase subunit gamma, mitochondrial;
PDBTitle: low resolution structures of bovine mitochondrial f1-atpase2 during controlled dehydration: hydration state 5.
74c1oy8A_



not modelled 5.7 10 PDB header:membrane protein
Chain: A: PDB Molecule:acriflavine resistance protein b;
PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump
75c2hbzA_



not modelled 5.6 16 PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:caspase-1;
PDBTitle: crystal structure of human caspase-1 (arg286->ala, glu390->ala) in2 complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-3 propionylamino]-4-oxo-pentanoic acid (z-vad-fmk)
76c3e20C_



not modelled 5.6 12 PDB header:translation
Chain: C: PDB Molecule:eukaryotic peptide chain release factor subunit 1;
PDBTitle: crystal structure of s.pombe erf1/erf3 complex
77d1a9xa3



not modelled 5.5 17 Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
78c3oaaO_



not modelled 5.2 12 PDB header:hydrolase/transport protein
Chain: O: PDB Molecule:atp synthase gamma chain;
PDBTitle: structure of the e.coli f1-atp synthase inhibited by subunit epsilon
79d1szpb1



not modelled 5.2 17 Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
80c3zvmA_



not modelled 5.1 26 PDB header:hydrolase/transferase/dna
Chain: A: PDB Molecule:bifunctional polynucleotide phosphatase/kinase;
PDBTitle: the structural basis for substrate recognition by mammalian2 polynucleotide kinase 3' phosphatase
81d1dt9a3



not modelled 5.1 13 Fold:N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
Superfamily:N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
Family:N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0