PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3iddA_

Fold library id	PDB Header	Molecule	Title
c3iddA_	PDB header: isomerase	Chain: A: PDB Molecule: 2,3-bisphosphoglycerate-independent	PDBTitle: cofactor-independent phosphoglycerate mutase from2 thermoplasma acidophilum dsm 1728

Links to external resources
Added to library: Sun Aug 29 01:39:44 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K S I I L I V L D G L G D R P G S D L Q N R T P L Q A A F R P N L N W L A S H G I N G I X H P I S P S D T S H X S L L G Y D P K V Y Y P G R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
B G G G T S B
S
T S
S T T
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G P F E A L G L G X D I R P G D L A F R A N F A T N R D G V I V D R R A G R E N K G N E E L A D A I S L D X G E Y S F R V K S G V E H R A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T T T G G G
T T T
S S
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L V V S G P D L S D X I G D S D P H R E G L P P E K I R P T D P S G D R T A E V X N A Y L E E A R R I L S D H R V N K E R V K N G R L P G N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
B
S
S S T T S
B S S G G G S T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence E L L V R S A G K V P A I P S F T E K N R X K G A C V V G S P W L K G L C R L L R X D V F D V P S N Y R G K I E K A V D L T S S H D F V L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T
G G G T
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence N I K N Y P L K R D V I E D I D R A X E P L K S I G D H A V I C V T G D H S D P V P I V F Y T D G V X N D G V H L F D E L S S A S G S L R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G G
T T T
T T
S
S T T G G G G S S

. . . . . . . . . 360 . . . .

Sequence T S Y N V X D I L X Q L A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	S	I	I	L	I	V	L	D	G	L	G	D	R	P	G	S	D	L	Q	N	R	T	P	L	Q	A	A	F	R	P	N	L	N	W	L	A	S	H	G	I	N	G	I	X	H	P	I	S	P	S	D	T	S	H	X	S	L	L	G	Y	D	P	K	V	Y	Y	P	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S				S		B	G	G	G	T	S	B						S											T	S														S					T	T			S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	P	F	E	A	L	G	L	G	X	D	I	R	P	G	D	L	A	F	R	A	N	F	A	T	N	R	D	G	V	I	V	D	R	R	A	G	R	E	N	K	G	N	E	E	L	A	D	A	I	S	L	D	X	G	E	Y	S	F	R	V	K	S	G	V	E	H	R	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T					T	T													T	T					T	T	G	G	G			T	T								T					S	S									S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	V	V	S	G	P	D	L	S	D	X	I	G	D	S	D	P	H	R	E	G	L	P	P	E	K	I	R	P	T	D	P	S	G	D	R	T	A	E	V	X	N	A	Y	L	E	E	A	R	R	I	L	S	D	H	R	V	N	K	E	R	V	K	N	G	R	L	P	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S					B			S			S	S	T	T	S							B	S	S	G	G	G																					S								T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	L	L	V	R	S	A	G	K	V	P	A	I	P	S	F	T	E	K	N	R	X	K	G	A	C	V	V	G	S	P	W	L	K	G	L	C	R	L	L	R	X	D	V	F	D	V	P	S	N	Y	R	G	K	I	E	K	A	V	D	L	T	S	S	H	D	F	V	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S	S								S										T	T																				G	G	G	T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	I	K	N	Y	P	L	K	R	D	V	I	E	D	I	D	R	A	X	E	P	L	K	S	I	G	D	H	A	V	I	C	V	T	G	D	H	S	D	P	V	P	I	V	F	Y	T	D	G	V	X	N	D	G	V	H	L	F	D	E	L	S	S	A	S	G	S	L	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	G	G	G	G		T	T	T																				T	T					S					S	T	T	G	G	G	G	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Sequence	T	S	Y	N	V	X	D	I	L	X	Q	L	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G							T	T