Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	S	D	N	D	E	L	Q	Q	I	A	H	L	R	R	E	Y	T	K	G	G	L	R	R	R	D	L	P	A	D	P	L	T	L	F	E	R	W	L	S	Q	A	C	E	A	K	L	A	D	P	T	A	M	V	V	A	T	V	D	E
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?					?		?		?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		H	G	Q	P	Y	Q	R	I	V	L	L	K	H	Y	D	E	K	G	M	V	F	Y	T	N	L	G	S	R	K	A	H	Q	I	E	N	N	P	R	V	S	L	L	F	P	W	H	T	L	E	R	Q	V	M	V	I	G	K	A	E	R
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		L	S	T	L	E	V	M	K	Y	F	H	S	R	P	R	D	S	Q	I	G	A	W	V	S	K	Q	S	S	R	I	S	A	R	G	I	L	E	S	K	F	L	E	L	K	Q	K	F	Q	Q	G	E	V	P	L	P	S	F	W	G	G
Secondary structure
SS confidence
Disorder													?																			?	?														?		?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Sequence		F	R	V	S	L	E	Q	I	E	F	W	Q	G	G	E	H	R	L	H	D	R	F	L	Y	Q	R	E	N	D	A	W	K	I	D	R	L	A	P
Secondary structure
SS confidence
Disorder																														?	?						?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2a2j chain A domain 1 Region: 16 - 218 Aligned: 198 Modelled: 203 Confidence: 100.0% Identity: 41% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 2a2j chain A Region: 16 - 218 Aligned: 198 Modelled: 203 Confidence: 100.0% Identity: 41% PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase; PDBTitle: crystal structure of a putative pyridoxine 5'-phosphate oxidase2 (rv2607) from mycobacterium tuberculosis Phyre2 PDB 1nrg chain A Region: 23 - 218 Aligned: 196 Modelled: 196 Confidence: 100.0% Identity: 43% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 1nrg chain A Region: 23 - 218 Aligned: 196 Modelled: 196 Confidence: 100.0% Identity: 43% PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxine 5'-phosphate oxidase; PDBTitle: structure and properties of recombinant human pyridoxine-5'-phosphate2 oxidase Phyre2 PDB 1dnl chain A Region: 20 - 218 Aligned: 199 Modelled: 199 Confidence: 100.0% Identity: 98% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 1ci0 chain A Region: 21 - 218 Aligned: 198 Modelled: 198 Confidence: 100.0% Identity: 40% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 1t9m chain A Region: 18 - 218 Aligned: 199 Modelled: 201 Confidence: 100.0% Identity: 31% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 1ty9 chain A Region: 18 - 218 Aligned: 199 Modelled: 201 Confidence: 100.0% Identity: 31% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 2i51 chain B Region: 29 - 218 Aligned: 178 Modelled: 179 Confidence: 100.0% Identity: 16% PDB header:flavoprotein Chain: B: PDB Molecule:uncharacterized conserved protein of cog5135; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related, fmn2 binding protein (npun_f5749) from nostoc punctiforme pcc 73102 at3 1.40 a resolution Phyre2 PDB 2ou5 chain B Region: 29 - 218 Aligned: 166 Modelled: 173 Confidence: 100.0% Identity: 18% PDB header:flavoprotein Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-binding; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related fmn-2 binding protein (jann_0254) from jannaschia sp. ccs1 at 1.60 a3 resolution Phyre2 PDB 2i02 chain A domain 1 Region: 47 - 204 Aligned: 126 Modelled: 129 Confidence: 99.9% Identity: 22% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 2re7 chain A Region: 32 - 194 Aligned: 124 Modelled: 134 Confidence: 99.9% Identity: 19% PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase related2 protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a3 resolution Phyre2 PDB 2hhz chain A Region: 32 - 204 Aligned: 129 Modelled: 137 Confidence: 99.9% Identity: 21% PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related2 protein (ssuidraft_2804) from streptococcus suis 89/1591 at 2.00 a3 resolution Phyre2 PDB 2hq7 chain A domain 1 Region: 50 - 196 Aligned: 116 Modelled: 118 Confidence: 99.9% Identity: 16% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 3dmb chain A Region: 29 - 199 Aligned: 135 Modelled: 140 Confidence: 99.9% Identity: 14% PDB header:oxidoreductase Chain: A: PDB Molecule:putative general stress protein 26 with a pnp-oxidase like PDBTitle: crystal structure of a putative general stress family protein2 (xcc2264) from xanthomonas campestris pv. campestris at 2.30 a3 resolution Phyre2 PDB 2fhq chain A domain 1 Region: 39 - 202 Aligned: 131 Modelled: 134 Confidence: 99.9% Identity: 17% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 3ec6 chain A Region: 39 - 198 Aligned: 127 Modelled: 131 Confidence: 99.9% Identity: 20% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 26; PDBTitle: crystal structure of the general stress protein 26 from bacillus2 anthracis str. sterne Phyre2 PDB 2ig6 chain B Region: 23 - 194 Aligned: 131 Modelled: 141 Confidence: 99.9% Identity: 18% PDB header:oxidoreductase Chain: B: PDB Molecule:nimc/nima family protein; PDBTitle: crystal structure of a nimc/nima family protein (ca_c2569) from2 clostridium acetobutylicum at 1.80 a resolution Phyre2 PDB 2iab chain B Region: 35 - 205 Aligned: 137 Modelled: 140 Confidence: 99.9% Identity: 22% PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a protein with fmn-binding split barrel fold2 (np_828636.1) from streptomyces avermitilis at 2.00 a resolution Phyre2 PDB 1vl7 chain A Region: 47 - 193 Aligned: 119 Modelled: 119 Confidence: 99.8% Identity: 24% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 1 d2a2ja1 2 c2a2jA_ 3 d1nrga_ 4 c1nrgA_ 5 d1dnla_ 6 d1ci0a_ 7 d1t9ma_ 8 d1ty9a_ 9 c2i51B_ 10 c2ou5B_ 11 d2i02a1 12 c2re7A_ 13 c2hhzA_ 14 d2hq7a1 15 c3dmbA_ 16 d2fhqa1 17 c3ec6A_ 18 c2ig6B_ 19 c2iabB_ 20 d1vl7a_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2a2ja1 100.0 41 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 2 c2a2jA_ 100.0 41 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase; PDBTitle: crystal structure of a putative pyridoxine 5'-phosphate oxidase2 (rv2607) from mycobacterium tuberculosis 3 d1nrga_ 100.0 43 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 4 c1nrgA_ 100.0 43 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxine 5'-phosphate oxidase; PDBTitle: structure and properties of recombinant human pyridoxine-5'-phosphate2 oxidase 5 d1dnla_ 100.0 98 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 6 d1ci0a_ 100.0 40 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 7 d1t9ma_ 100.0 31 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 8 d1ty9a_ 100.0 31 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 9 c2i51B_ 100.0 16 PDB header:flavoprotein Chain: B: PDB Molecule:uncharacterized conserved protein of cog5135; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related, fmn2 binding protein (npun_f5749) from nostoc punctiforme pcc 73102 at3 1.40 a resolution 10 c2ou5B_ 100.0 18 PDB header:flavoprotein Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-binding; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related fmn-2 binding protein (jann_0254) from jannaschia sp. ccs1 at 1.60 a3 resolution 11 d2i02a1 99.9 22 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 12 c2re7A_ 99.9 19 PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase related2 protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a3 resolution 13 c2hhzA_ 99.9 21 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related2 protein (ssuidraft_2804) from streptococcus suis 89/1591 at 2.00 a3 resolution 14 d2hq7a1 99.9 16 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 15 c3dmbA_ 99.9 14 PDB header:oxidoreductase Chain: A: PDB Molecule:putative general stress protein 26 with a pnp-oxidase like PDBTitle: crystal structure of a putative general stress family protein2 (xcc2264) from xanthomonas campestris pv. campestris at 2.30 a3 resolution 16 d2fhqa1 99.9 17 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 17 c3ec6A_ 99.9 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 26; PDBTitle: crystal structure of the general stress protein 26 from bacillus2 anthracis str. sterne 18 c2ig6B_ 99.9 18 PDB header:oxidoreductase Chain: B: PDB Molecule:nimc/nima family protein; PDBTitle: crystal structure of a nimc/nima family protein (ca_c2569) from2 clostridium acetobutylicum at 1.80 a resolution 19 c2iabB_ 99.9 22 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a protein with fmn-binding split barrel fold2 (np_828636.1) from streptomyces avermitilis at 2.00 a resolution 20 d1vl7a_ 99.8 24 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 21 c3db0B_ not modelled 99.8 19 PDB header:oxidoreductase Chain: B: PDB Molecule:lin2891 protein; PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_472219.1) from listeria innocua at 2.00 a resolution 22 c2qeaB_ not modelled 99.8 18 PDB header:oxidoreductase Chain: B: PDB Molecule:putative general stress protein 26; PDBTitle: crystal structure of a putative general stress protein 26 (jann_0955)2 from jannaschia sp. ccs1 at 2.46 a resolution 23 d2asfa1 not modelled 99.8 17 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 24 c3f7eB_ not modelled 99.7 17 PDB header:unknown function Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn- PDBTitle: msmeg_3380 f420 reductase 25 d1rfea_ not modelled 99.7 22 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 26 c2htdB_ not modelled 99.7 18 PDB header:oxidoreductase Chain: B: PDB Molecule:predicted flavin-nucleotide-binding protein from cog3576 PDBTitle: crystal structure of a putative pyridoxamine 5'-phosphate oxidase2 (ldb0262) from lactobacillus delbrueckii subsp. at 1.60 a resolution 27 d1w9aa_ not modelled 99.6 13 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 28 d2htia1 not modelled 99.6 21 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 29 c2htiA_ not modelled 99.6 21 PDB header:fmn-binding protein Chain: A: PDB Molecule:bh0577 protein; PDBTitle: crystal structure of a flavin-nucleotide-binding protein (bh_0577)2 from bacillus halodurans at 2.50 a resolution 30 c2q9kA_ not modelled 99.6 17 PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative oxidoreductase (exig_1997) from2 exiguobacterium sibiricum 255-15 at 1.59 a resolution 31 d2fg9a1 not modelled 99.5 15 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 32 d1flma_ not modelled 99.4 18 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 33 c3gasA_ not modelled 99.4 15 PDB header:oxidoreductase Chain: A: PDB Molecule:heme oxygenase; PDBTitle: crystal structure of helicobacter pylori heme oxygenase hugz2 in complex with heme 34 d2arza1 not modelled 99.4 17 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 35 d2hq9a1 not modelled 99.3 22 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 36 c3dnhB_ not modelled 99.3 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein atu2129; PDBTitle: the crystal structure of the protein atu2129 (unknown function) from2 agrobacterium tumefaciens str. c58 37 c3fkhB_ not modelled 99.2 16 PDB header:oxidoreductase Chain: B: PDB Molecule:putative pyridoxamine 5'-phosphate oxidase; PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_601736.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.51 a resolution 38 c3cp3A_ not modelled 99.1 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of conserved protein of unknown function dip18742 from corynebacterium diphtheriae 39 d2fura1 not modelled 98.8 16 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 40 c3ba3A_ not modelled 98.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-like protein; PDBTitle: crystal structure of pyridoxamine 5'-phosphate oxidase-like protein2 (np_783940.1) from lactobacillus plantarum at 1.55 a resolution 41 d1xhna1 not modelled 98.6 14 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 42 d2vpaa1 not modelled 98.4 23 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 43 c2ol5B_ not modelled 98.3 13 PDB header:transcription regulator Chain: B: PDB Molecule:pai 2 protein; PDBTitle: crystal structure of a protease synthase and sporulation negative2 regulatory protein pai 2 from bacillus stearothermophilus 44 c3h96B_ not modelled 96.8 8 PDB header:flavoprotein Chain: B: PDB Molecule:f420-h2 dependent reductase a; PDBTitle: msmeg_3358 f420 reductase 45 d2ptfa1 not modelled 91.0 18 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:MTH863-like 46 c2ptfB_ not modelled 89.2 18 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein mth_863; PDBTitle: crystal structure of protein mth_863 from methanobacterium2 thermoautotrophicum bound to fmn 47 c3b5mD_ not modelled 63.5 18 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of conserved uncharacterized protein from2 rhodopirellula baltica 48 d2imla1 not modelled 50.7 12 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:MTH863-like 49 c3fgeA_ not modelled 48.0 8 PDB header:oxidoreductase Chain: A: PDB Molecule:putative flavin reductase with split barrel domain; PDBTitle: crystal structure of putative flavin reductase with split barrel2 domain (yp_750721.1) from shewanella frigidimarina ncimb 400 at 1.743 a resolution 50 c3bjqA_ not modelled 42.7 13 PDB header:viral protein Chain: A: PDB Molecule:phage-related protein; PDBTitle: crystal structure of a phage-related protein (bb3626) from bordetella2 bronchiseptica rb50 at 2.05 a resolution 51 c3psqA_ not modelled 41.8 10 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical exported protein; PDBTitle: crystal structure of spy0129, a streptococcus pyogenes class b sortase2 involved in pilus biogenesis 52 d1ejea_ not modelled 40.1 22 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 53 d1usca_ not modelled 37.8 12 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 54 c3bnkB_ not modelled 32.4 13 PDB header:electron transport Chain: B: PDB Molecule:flavoredoxin; PDBTitle: x-ray crystal structure of flavoredoxin from methanosarcina2 acetivorans 55 c3e4vA_ not modelled 29.1 11 PDB header:flavoprotein Chain: A: PDB Molecule:nadh:fmn oxidoreductase like protein; PDBTitle: crystal structure of nadh:fmn oxidoreductase like protein in complex2 with fmn (yp_544701.1) from methylobacillus flagellatus kt at 1.40 a3 resolution 56 d1rz0a_ not modelled 28.8 11 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 57 c2d5mA_ not modelled 24.0 10 PDB header:electron transport Chain: A: PDB Molecule:flavoredoxin; PDBTitle: flavoredoxin of desulfovibrio vulgaris (miyazaki f) 58 d1qwza_ not modelled 19.1 17 Fold:Sortase Superfamily:Sortase Family:Sortase 59 d1eoqa_ not modelled 17.4 23 Fold:Acyl carrier protein-like Superfamily:Retrovirus capsid dimerization domain-like Family:Retrovirus capsid protein C-terminal domain 60 d1ikpa1 not modelled 17.2 33 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Exotoxin A, N-terminal domain 61 c3bk5A_ not modelled 14.7 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative outer membrane lipoprotein-sorting protein; PDBTitle: crystal structure of putative outer membrane lipoprotein-sorting2 protein domain from vibrio parahaemolyticus 62 c3pftA_ not modelled 14.7 8 PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase; PDBTitle: crystal structure of untagged c54a mutant flavin reductase (dszd) in2 complex with fmn from mycobacterium goodii 63 c2kp7A_ not modelled 9.7 44 PDB header:hydrolase Chain: A: PDB Molecule:crossover junction endonuclease mus81; PDBTitle: solution nmr structure of the mus81 n-terminal hhh.2 northeast structural genomics consortium target mmt1a 64 c3rbjB_ not modelled 8.5 8 PDB header:hydrolase Chain: B: PDB Molecule:sortase family protein; PDBTitle: crystal structure of the lid-mutant of streptococcus agalactiae2 sortase c1 65 d1qbaa1 not modelled 8.1 27 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 66 d2oqza1 not modelled 8.0 23 Fold:Sortase Superfamily:Sortase Family:Sortase 67 d1i0ra_ not modelled 7.8 7 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 68 c2khxA_ not modelled 7.2 12 PDB header:gene regulation,nuclear protein Chain: A: PDB Molecule:ribonuclease 3; PDBTitle: drosha double-stranded rna binding motif 69 c2xwgA_ not modelled 7.2 13 PDB header:hydrolase Chain: A: PDB Molecule:sortase; PDBTitle: crystal structure of sortase c-1 from actinomyces oris (formerly2 actinomyces naeslundii) 70 d1wiia_ not modelled 7.1 12 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Putative zinc binding domain 71 c3rh7A_ not modelled 6.9 18 PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical oxidoreductase; PDBTitle: crystal structure of a hypothetical oxidoreductase (sma0793) from2 sinorhizobium meliloti 1021 at 3.00 a resolution 72 c2zyzA_ not modelled 5.8 14 PDB header:splicing Chain: A: PDB Molecule:putative uncharacterized protein pae0789; PDBTitle: pyrobaculum aerophilum splicing endonuclease 73 c1ikqA_ not modelled 5.4 33 PDB header:transferase Chain: A: PDB Molecule:exotoxin a; PDBTitle: pseudomonas aeruginosa exotoxin a, wild type 74 d1qrjb1 not modelled 5.3 24 Fold:Acyl carrier protein-like Superfamily:Retrovirus capsid dimerization domain-like Family:Retrovirus capsid protein C-terminal domain 75 d1ng5a_ not modelled 5.1 18 Fold:Sortase Superfamily:Sortase Family:Sortase

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0