Fold library entry viewer: c1ikqA_

Added to library: Tue Mar 16 12:27:28 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	E	A	F	D	L	W	N	E	C	A	K	A	C	V	L	D	L	K	D	G	V	R	S	S	R	M	S	V	D	P	A	I	A	D	T	N	G	Q	G	V	L	H	Y	S	M	V	L	E	G	G	N	D	A	L	K	L	A	I	D	N	A	L	S	I	T	S	D	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B							T	T	T							T	T	S														T		S	S												T	T	T	T	S						T	T	T							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	I	R	L	E	G	G	V	E	P	N	K	P	V	R	Y	S	Y	T	R	Q	A	R	G	S	W	S	L	N	W	L	V	P	I	G	H	E	K	P	S	N	I	K	V	F	I	H	E	L	N	A	G	N	Q	L	S	H	M	S	P	I	Y	T	I	E	M	G	D	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		S	S	S									S	S	S	S												T	T			S											T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	A	K	L	A	R	D	A	T	F	F	V	R	A	H	E	S	N	E	M	Q	P	T	L	A	I	S	H	A	G	V	S	V	V	M	A	Q	K	R	W	S	E	W	A	S	G	K	V	L	C	L	L	D	P	L	D	G	V	Y	N	Y	L	A	Q	Q	R	C	N	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T										S				S	S																								S	G	G	G	G	G	G		G	G	G	T	T							S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	T	W	E	G	K	I	Y	R	V	L	A	G	N	P	A	K	H	D	L	D	I	K	P	T	V	I	S	H	R	L	H	F	P	E	G	G	S	L	A	A	L	T	A	H	Q	A	C	H	L	P	L	E	T	F	T	R	H	R	Q	P	R	G	W	E	Q	L	E	Q	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T															B				S										T	T														T			G	G	G	G	G		S	S			S	S							T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	Y	P	V	Q	R	L	V	A	L	Y	L	A	A	R	L	S	W	N	Q	V	D	Q	V	I	R	N	A	L	A	S	P	G	S	G	G	D	L	G	E	A	I	R	E	Q	P	E	Q	A	R	L	A	L	T	L	A	A	A	E	S	E	R	F	V	R	Q	G	T	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T			G	G	G											S	T	T		S										S																							T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	E	A	G	A	A	N	A	D	V	V	S	L	T	C	P	V	A	A	G	E	C	A	G	P	A	D	S	G	D	A	L	L	E	R	N	Y	P	T	G	A	E	F	L	G	D	G	G	D	V	S	F	S	T	R	G	T	Q	N	W	T	V	E	R	L	L	Q	A	H	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T										S	S	S	S						G	G	G	G	G	S									G	G	G	S			S	S	S						T	T			T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	L	E	E	R	G	Y	V	F	V	G	Y	H	G	T	F	L	E	A	A	Q	S	I	V	F	G	G	V	R	A	R	S	Q	D	L	D	A	I	W	R	G	F	Y	I	A	G	D	P	A	L	A	Y	G	Y	A	Q	D	Q	E	P	D	A	R	G	R	I	R	N	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T																				T								S	S		G	G	G		S				B	S	S						T	T	S	B		S	S			T	T	S				B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	L	R	V	Y	V	P	R	S	S	L	P	G	F	Y	R	T	S	L	T	L	A	A	P	E	A	A	G	E	V	E	R	L	I	G	H	P	L	P	L	R	L	D	A	I	T	G	P	E	E	E	G	G	R	L	E	T	I	L	G	W	P	L	A	E	R	T	V	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	G	G	G					S	S		T	T	S	T	T										T	S		S	S		S	S							S	S	T	T														T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Sequence	P	S	A	I	P	T	D	P	R	N	V	G	G	D	L	D	P	S	S	I	P	D	K	E	Q	A	I	S	A	L	P	D	Y	A	S	Q	P	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S				T	T	S	T	T	S				G	G	G	S						T	T							B	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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