PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1dnla_

Fold library id	Fold	Superfamily	Family
d1dnla_	Split barrel-like	FMN-binding split barrel	PNP-oxidase like

Links to external resources
Added to library: Tue Mar 16 12:35:15 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G G L R R R D L P A D P L T L F E R W L S Q A C E A K L A D P T A X V V A T V D E H G Q P Y Q R I V L L K H Y D E K G X V F Y T N L G S R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S S T T
S
T T
T T S
T T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A H Q I E N N P R V S L L F P W H T L E R Q V X V I G K A E R L S T L E V X K Y F H S R P R D S Q I G A W V S K Q S S R I S A R G I L E S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
T T S
T T S
S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . .

Sequence F L E L K Q K F Q Q G E V P L P S F W G G F R V S L E Q I E F W Q G G E H R L H D R F L Y Q R E N D A W K I D R L A P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S S
T T
S
G G G
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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All images and data generated by Phyre2 are free to use in any publication with acknowledgement
Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	G	L	R	R	R	D	L	P	A	D	P	L	T	L	F	E	R	W	L	S	Q	A	C	E	A	K	L	A	D	P	T	A	X	V	V	A	T	V	D	E	H	G	Q	P	Y	Q	R	I	V	L	L	K	H	Y	D	E	K	G	X	V	F	Y	T	N	L	G	S	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G			S	S															T	T		S		T	T									T	T	S														T	T								T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	H	Q	I	E	N	N	P	R	V	S	L	L	F	P	W	H	T	L	E	R	Q	V	X	V	I	G	K	A	E	R	L	S	T	L	E	V	X	K	Y	F	H	S	R	P	R	D	S	Q	I	G	A	W	V	S	K	Q	S	S	R	I	S	A	R	G	I	L	E	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	G	G	G	T																						T	T	S													T	T	S			S		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Sequence	F	L	E	L	K	Q	K	F	Q	Q	G	E	V	P	L	P	S	F	W	G	G	F	R	V	S	L	E	Q	I	E	F	W	Q	G	G	E	H	R	L	H	D	R	F	L	Y	Q	R	E	N	D	A	W	K	I	D	R	L	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	T	T	S	S					T	T									S									G	G	G											S	S	S