Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP17115
DateThu Jan 5 11:35:59 GMT 2012
Unique Job IDcabd06c8e9c5c9d2

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3etnD_
Top template information
PDB header:isomerase
Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule
PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution
Confidence and coverage
Confidence:100.0% Coverage: 60%
191 residues ( 60% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
315 residues ( 98%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI
Secondary structure 








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Disorder  ???
























































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   .........70.........80.........90.........100.........110.........120
Sequence  AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL
Secondary structure 

















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   .........130.........140.........150.........160.........170.........180
Sequence  AMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE
Secondary structure 
























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Disorder 


?
???















???
??

??




















??


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   .........190.........200.........210.........220.........230.........240
Sequence  DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ
Secondary structure 



















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Disorder 



?????????




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   .........250.........260.........270.........280.........290.........300
Sequence  QVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVV
Secondary structure 























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Disorder 















?
????






























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   .........310.........320.
Sequence  DENGKLTGAINLQDFYQAGII
Secondary structure 







SS confidence 




















Disorder 















?????
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3etn chain D

3D model

Region: 3 - 193
Aligned: 191
Modelled: 191
Confidence: 100.0%
Identity: 31%
PDB header:isomerase
Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule
PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution

Phyre2

PDB 3fxa chain A

3D model

Region: 2 - 190
Aligned: 189
Modelled: 189
Confidence: 100.0%
Identity: 32%
PDB header:sugar binding protein
Chain: A: PDB Molecule:sis domain protein;
PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution

Phyre2

PDB 2xhz chain C

3D model

Region: 4 - 176
Aligned: 173
Modelled: 173
Confidence: 100.0%
Identity: 49%
PDB header:isomerase
Chain: C: PDB Molecule:arabinose 5-phosphate isomerase;
PDBTitle: probing the active site of the sugar isomerase domain from e. coli2 arabinose-5-phosphate isomerase via x-ray crystallography

Phyre2

PDB 3cvj chain B

3D model

Region: 9 - 189
Aligned: 180
Modelled: 181
Confidence: 100.0%
Identity: 19%
PDB header:isomerase
Chain: B: PDB Molecule:putative phosphoheptose isomerase;
PDBTitle: crystal structure of a putative phosphoheptose isomerase (bh3325) from2 bacillus halodurans c-125 at 2.00 a resolution

Phyre2

PDB 1vim chain A

3D model

Region: 7 - 186
Aligned: 175
Modelled: 180
Confidence: 100.0%
Identity: 23%
Fold: SIS domain
Superfamily: SIS domain
Family: mono-SIS domain

Phyre2

PDB 1m3s chain A

3D model

Region: 10 - 187
Aligned: 173
Modelled: 178
Confidence: 100.0%
Identity: 18%
Fold: SIS domain
Superfamily: SIS domain
Family: mono-SIS domain

Phyre2

PDB 1jeo chain A

3D model

Region: 11 - 187
Aligned: 166
Modelled: 172
Confidence: 99.9%
Identity: 17%
Fold: SIS domain
Superfamily: SIS domain
Family: mono-SIS domain

Phyre2

PDB 3sho chain A

3D model

Region: 7 - 176
Aligned: 163
Modelled: 170
Confidence: 99.9%
Identity: 15%
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, rpir family;
PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain)

Phyre2

PDB 2yva chain B

3D model

Region: 5 - 174
Aligned: 162
Modelled: 162
Confidence: 99.9%
Identity: 19%
PDB header:dna binding protein
Chain: B: PDB Molecule:dnaa initiator-associating protein diaa;
PDBTitle: crystal structure of escherichia coli diaa

Phyre2

PDB 2puw chain A

3D model

Region: 1 - 185
Aligned: 182
Modelled: 185
Confidence: 99.9%
Identity: 10%
PDB header:transferase
Chain: A: PDB Molecule:isomerase domain of glutamine-fructose-6-phosphate
PDBTitle: the crystal structure of isomerase domain of glucosamine-6-phosphate2 synthase from candida albicans

Phyre2

PDB 1nri chain A

3D model

Region: 4 - 182
Aligned: 178
Modelled: 179
Confidence: 99.9%
Identity: 16%
Fold: SIS domain
Superfamily: SIS domain
Family: mono-SIS domain

Phyre2

PDB 1nri chain A

3D model

Region: 4 - 182
Aligned: 178
Modelled: 179
Confidence: 99.9%
Identity: 16%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein hi0754;
PDBTitle: crystal structure of putative phosphosugar isomerase hi0754 from2 haemophilus influenzae

Phyre2

PDB 1x92 chain A

3D model

Region: 4 - 174
Aligned: 163
Modelled: 171
Confidence: 99.9%
Identity: 18%
Fold: SIS domain
Superfamily: SIS domain
Family: mono-SIS domain

Phyre2

PDB 2zj3 chain A

3D model

Region: 1 - 185
Aligned: 182
Modelled: 185
Confidence: 99.9%
Identity: 13%
PDB header:transferase
Chain: A: PDB Molecule:glucosamine--fructose-6-phosphate
PDBTitle: isomerase domain of human glucose:fructose-6-phosphate2 amidotransferase

Phyre2

PDB 3fj1 chain A

3D model

Region: 8 - 180
Aligned: 170
Modelled: 171
Confidence: 99.9%
Identity: 21%
PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerase;
PDBTitle: crystal structure of putative phosphosugar isomerase (yp_167080.1)2 from silicibacter pomeroyi dss-3 at 1.75 a resolution

Phyre2

PDB 1tk9 chain A

3D model

Region: 4 - 171
Aligned: 159
Modelled: 168
Confidence: 99.9%
Identity: 15%
Fold: SIS domain
Superfamily: SIS domain
Family: mono-SIS domain

Phyre2

PDB 2aml chain B

3D model

Region: 13 - 181
Aligned: 166
Modelled: 169
Confidence: 99.9%
Identity: 13%
PDB header:transferase
Chain: B: PDB Molecule:sis domain protein;
PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution

Phyre2

PDB 3trj chain C

3D model

Region: 3 - 174
Aligned: 163
Modelled: 172
Confidence: 99.9%
Identity: 17%
PDB header:isomerase
Chain: C: PDB Molecule:phosphoheptose isomerase;
PDBTitle: structure of a phosphoheptose isomerase from francisella tularensis

Phyre2

PDB 2x3y chain A

3D model

Region: 1 - 174
Aligned: 166
Modelled: 166
Confidence: 99.9%
Identity: 16%
PDB header:isomerase
Chain: A: PDB Molecule:phosphoheptose isomerase;
PDBTitle: crystal structure of gmha from burkholderia pseudomallei

Phyre2

PDB 3hba chain A

3D model

Region: 2 - 171
Aligned: 164
Modelled: 170
Confidence: 99.9%
Identity: 16%
PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerase;
PDBTitle: crystal structure of a putative phosphosugar isomerase (sden_2705)2 from shewanella denitrificans os217 at 2.00 a resolution

Phyre2

PDB 3fna chain A

3D model

Region: 191 - 316
Aligned: 120
Modelled: 112
Confidence: 99.9%
Identity: 36%
PDB header:isomerase
Chain: A: PDB Molecule:possible arabinose 5-phosphate isomerase;
PDBTitle: crystal structure of the cbs pair of possible d-arabinose 5-phosphate2 isomerase yrbh from escherichia coli cft073

Phyre2

PDB 3l31 chain B

3D model

Region: 197 - 313
Aligned: 115
Modelled: 115
Confidence: 99.7%
Identity: 30%
PDB header:hydrolase
Chain: B: PDB Molecule:probable manganase-dependent inorganic
PDBTitle: crystal structure of the cbs and drtgg domains of the2 regulatory region of clostridium perfringens3 pyrophosphatase complexed with the inhibitor, amp

Phyre2
1

c3etnD_
2

c3fxaA_
3

c2xhzC_
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c3cvjB_
5

d1vima_
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d1m3sa_
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d1jeoa_
8

c3shoA_
9

c2yvaB_
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c2puwA_
11

d1nria_
12

c1nriA_
13

d1x92a_
14

c2zj3A_
15

c3fj1A_
16

d1tk9a_
17

c2amlB_
18

c3trjC_
19

c2x3yA_
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c3hbaA_
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c3fnaA_
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c3l31B_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3etnD_



100.0 31 PDB header:isomerase
Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule
PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution
2c3fxaA_



100.0 32 PDB header:sugar binding protein
Chain: A: PDB Molecule:sis domain protein;
PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution
3c2xhzC_



100.0 49 PDB header:isomerase
Chain: C: PDB Molecule:arabinose 5-phosphate isomerase;
PDBTitle: probing the active site of the sugar isomerase domain from e. coli2 arabinose-5-phosphate isomerase via x-ray crystallography
4c3cvjB_



100.0 19 PDB header:isomerase
Chain: B: PDB Molecule:putative phosphoheptose isomerase;
PDBTitle: crystal structure of a putative phosphoheptose isomerase (bh3325) from2 bacillus halodurans c-125 at 2.00 a resolution
5d1vima_



100.0 23 Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
6d1m3sa_



100.0 18 Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
7d1jeoa_



99.9 17 Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
8c3shoA_



99.9 15 PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, rpir family;
PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain)
9c2yvaB_



99.9 19 PDB header:dna binding protein
Chain: B: PDB Molecule:dnaa initiator-associating protein diaa;
PDBTitle: crystal structure of escherichia coli diaa
10c2puwA_



99.9 10 PDB header:transferase
Chain: A: PDB Molecule:isomerase domain of glutamine-fructose-6-phosphate
PDBTitle: the crystal structure of isomerase domain of glucosamine-6-phosphate2 synthase from candida albicans
11d1nria_



99.9 16 Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
12c1nriA_



99.9 16 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein hi0754;
PDBTitle: crystal structure of putative phosphosugar isomerase hi0754 from2 haemophilus influenzae
13d1x92a_



99.9 18 Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
14c2zj3A_



99.9 13 PDB header:transferase
Chain: A: PDB Molecule:glucosamine--fructose-6-phosphate
PDBTitle: isomerase domain of human glucose:fructose-6-phosphate2 amidotransferase
15c3fj1A_



99.9 21 PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerase;
PDBTitle: crystal structure of putative phosphosugar isomerase (yp_167080.1)2 from silicibacter pomeroyi dss-3 at 1.75 a resolution
16d1tk9a_



99.9 15 Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
17c2amlB_



99.9 13 PDB header:transferase
Chain: B: PDB Molecule:sis domain protein;
PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution
18c3trjC_



99.9 17 PDB header:isomerase
Chain: C: PDB Molecule:phosphoheptose isomerase;
PDBTitle: structure of a phosphoheptose isomerase from francisella tularensis
19c2x3yA_



99.9 16 PDB header:isomerase
Chain: A: PDB Molecule:phosphoheptose isomerase;
PDBTitle: crystal structure of gmha from burkholderia pseudomallei
20c3hbaA_



99.9 16 PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerase;
PDBTitle: crystal structure of a putative phosphosugar isomerase (sden_2705)2 from shewanella denitrificans os217 at 2.00 a resolution
21d1j5xa_



not modelled 99.9 18 Fold:SIS domain
Superfamily:SIS domain
Family:double-SIS domain
22d1moqa_



not modelled 99.9 15 Fold:SIS domain
Superfamily:SIS domain
Family:double-SIS domain
23d1x94a_



not modelled 99.9 13 Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
24c3g68A_



not modelled 99.9 13 PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerase;
PDBTitle: crystal structure of a putative phosphosugar isomerase (cd3275) from2 clostridium difficile 630 at 1.80 a resolution
25c3fnaA_



99.9 36 PDB header:isomerase
Chain: A: PDB Molecule:possible arabinose 5-phosphate isomerase;
PDBTitle: crystal structure of the cbs pair of possible d-arabinose 5-phosphate2 isomerase yrbh from escherichia coli cft073
26c3tbfA_



not modelled 99.9 11 PDB header:transferase
Chain: A: PDB Molecule:glucosamine--fructose-6-phosphate aminotransferase
PDBTitle: c-terminal domain of glucosamine-fructose-6-phosphate aminotransferase2 from francisella tularensis.
27c3knzA_



not modelled 99.9 15 PDB header:sugar binding protein
Chain: A: PDB Molecule:putative sugar binding protein;
PDBTitle: crystal structure of putative sugar binding protein (np_459565.1) from2 salmonella typhimurium lt2 at 2.50 a resolution
28c2a3nA_



not modelled 99.9 18 PDB header:sugar binding protein
Chain: A: PDB Molecule:putative glucosamine-fructose-6-phosphate aminotransferase;
PDBTitle: crystal structure of a putative glucosamine-fructose-6-phosphate2 aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.353 a resolution
29c1zfjA_



not modelled 99.8 22 PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine monophosphate dehydrogenase;
PDBTitle: inosine monophosphate dehydrogenase (impdh; ec 1.1.1.205) from2 streptococcus pyogenes
30c3euaD_



not modelled 99.8 16 PDB header:isomerase
Chain: D: PDB Molecule:putative fructose-aminoacid-6-phosphate deglycase;
PDBTitle: crystal structure of a putative phosphosugar isomerase (bsu32610) from2 bacillus subtilis at 1.90 a resolution
31c2qh1B_



not modelled 99.8 18 PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein ta0289;
PDBTitle: structure of ta289, a cbs-rubredoxin-like protein, in its fe+2-bound2 state
32c3hf7A_



not modelled 99.8 12 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized cbs-domain protein;
PDBTitle: the crystal structure of a cbs-domain pair with bound amp from2 klebsiella pneumoniae to 2.75a
33c3pc3A_



not modelled 99.8 15 PDB header:lyase
Chain: A: PDB Molecule:cg1753, isoform a;
PDBTitle: full length structure of cystathionine beta-synthase from drosophila2 in complex with aminoacrylate
34c3fkjA_



not modelled 99.8 14 PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerases;
PDBTitle: crystal structure of a putative phosphosugar isomerase (stm_0572) from2 salmonella typhimurium lt2 at 2.12 a resolution
35d3ddja1



not modelled 99.8 15 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
36c2emqA_



not modelled 99.8 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical conserved protein;
PDBTitle: hypothetical conserved protein (gk1048) from geobacillus kaustophilus
37c3lhhA_



not modelled 99.8 17 PDB header:membrane protein
Chain: A: PDB Molecule:cbs domain protein;
PDBTitle: the crystal structure of cbs domain protein from shewanella2 oneidensis mr-1.
38c1jxaA_



not modelled 99.8 14 PDB header:transferase
Chain: A: PDB Molecule:glucosamine 6-phosphate synthase;
PDBTitle: glucosamine 6-phosphate synthase with glucose 6-phosphate
39d1yava3



not modelled 99.8 16 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
40c2decA_



not modelled 99.8 17 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:325aa long hypothetical protein;
PDBTitle: crystal structure of the ph0510 protein from pyrococcus horikoshii ot3
41c3i8nB_



not modelled 99.8 15 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein vp2912;
PDBTitle: a domain of a conserved functionally known protein from2 vibrio parahaemolyticus rimd 2210633.
42c3jtfB_



not modelled 99.8 13 PDB header:transport protein
Chain: B: PDB Molecule:magnesium and cobalt efflux protein;
PDBTitle: the cbs domain pair structure of a magnesium and cobalt efflux protein2 from bordetella parapertussis in complex with amp
43c3lfrB_



not modelled 99.8 16 PDB header:transport protein
Chain: B: PDB Molecule:putative metal ion transporter;
PDBTitle: the crystal structure of a cbs domain from a putative metal2 ion transporter bound to amp from pseudomonas syringae to3 1.55a
44d1vr9a3



not modelled 99.8 25 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
45c3lqnA_



not modelled 99.8 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:cbs domain protein;
PDBTitle: crystal structure of cbs domain-containing protein of2 unknown function from bacillus anthracis str. ames ancestor
46c1yavB_



not modelled 99.8 16 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein bsu14130;
PDBTitle: crystal structure of cbs domain-containing protein ykul2 from bacillus subtilis
47d2yzia1



not modelled 99.8 21 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
48d1pvma4



not modelled 99.8 18 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
49c3nqrD_



not modelled 99.8 11 PDB header:transport protein
Chain: D: PDB Molecule:magnesium and cobalt efflux protein corc;
PDBTitle: a putative cbs domain-containing protein from salmonella typhimurium2 lt2
50c3ctuB_



not modelled 99.8 17 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:cbs domain protein;
PDBTitle: crystal structure of cbs domain protein from streptococcus2 pneumoniae tigr4
51c2qlvF_



not modelled 99.8 20 PDB header:transferase/protein binding
Chain: F: PDB Molecule:nuclear protein snf4;
PDBTitle: crystal structure of the heterotrimer core of the s.2 cerevisiae ampk homolog snf1
52c1vr9B_



not modelled 99.8 25 PDB header:unknown function
Chain: B: PDB Molecule:cbs domain protein/act domain protein;
PDBTitle: crystal structure of a cbs domain pair/act domain protein (tm0892)2 from thermotoga maritima at 1.70 a resolution
53d2nyca1



not modelled 99.8 22 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
54c2ouxB_



not modelled 99.8 17 PDB header:transport protein
Chain: B: PDB Molecule:magnesium transporter;
PDBTitle: crystal structure of the soluble part of a magnesium transporter
55c2qr1E_



not modelled 99.8 19 PDB header:transferase
Chain: E: PDB Molecule:protein c1556.08c;
PDBTitle: crystal structure of the adenylate sensor from amp-activated protein2 kinase in complex with adp
56c3ocmA_



not modelled 99.8 16 PDB header:membrane protein
Chain: A: PDB Molecule:putative membrane protein;
PDBTitle: the crystal structure of a domain from a possible membrane protein of2 bordetella parapertussis
57d2o16a3



not modelled 99.8 25 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
58d2yzqa1



not modelled 99.8 20 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
59c3fwrB_



not modelled 99.8 21 PDB header:transcription
Chain: B: PDB Molecule:yqzb protein;
PDBTitle: crystal structure of the cbs domains from the bacillus subtilis ccpn2 repressor complexed with adp
60c3odpA_



not modelled 99.8 15 PDB header:isomerase
Chain: A: PDB Molecule:putative tagatose-6-phosphate ketose/aldose isomerase;
PDBTitle: crystal structure of a putative tagatose-6-phosphate ketose/aldose2 isomerase (nt01cx_0292) from clostridium novyi nt at 2.35 a3 resolution
61d2d4za3



not modelled 99.8 18 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
62c3lv9A_



not modelled 99.8 18 PDB header:membrane protein
Chain: A: PDB Molecule:putative transporter;
PDBTitle: crystal structure of cbs domain of a putative transporter from2 clostridium difficile 630
63d2ef7a1



not modelled 99.8 25 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
64c3gbyA_



not modelled 99.8 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein ct1051;
PDBTitle: crystal structure of a protein with unknown function ct10512 from chlorobium tepidum
65c3orgB_



not modelled 99.8 14 PDB header:transport protein
Chain: B: PDB Molecule:cmclc;
PDBTitle: crystal structure of a eukaryotic clc transporter
66c2d4zB_



not modelled 99.8 19 PDB header:transport protein
Chain: B: PDB Molecule:chloride channel protein;
PDBTitle: crystal structure of the cytoplasmic domain of the chloride channel2 clc-0
67d1pbja3



not modelled 99.8 20 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
68d1x9ia_



not modelled 99.7 16 Fold:SIS domain
Superfamily:SIS domain
Family:double-SIS domain
69c2p9mD_



not modelled 99.7 24 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein mj0922;
PDBTitle: crystal structure of conserved hypothetical protein mj0922 from2 methanocaldococcus jannaschii dsm 2661
70d2v8qe2



not modelled 99.7 18 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
71d1o50a3



not modelled 99.7 15 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
72d2ouxa2



not modelled 99.7 17 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
73d1y5ha3



not modelled 99.7 14 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
74c2v8qE_



not modelled 99.7 17 PDB header:transferase
Chain: E: PDB Molecule:5'-amp-activated protein kinase subunit gamma-1;
PDBTitle: crystal structure of the regulatory fragment of mammalian2 ampk in complexes with amp
75c2yvxD_



not modelled 99.7 24 PDB header:transport protein
Chain: D: PDB Molecule:mg2+ transporter mgte;
PDBTitle: crystal structure of magnesium transporter mgte
76c3ocoB_



not modelled 99.7 16 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hemolysin-like protein containing cbs domains;
PDBTitle: the crystal structure of a hemolysin-like protein containing cbs2 domain of oenococcus oeni psu
77d2j9la1



not modelled 99.7 19 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
78c2yvzA_



not modelled 99.7 22 PDB header:transport protein
Chain: A: PDB Molecule:mg2+ transporter mgte;
PDBTitle: crystal structure of magnesium transporter mgte cytosolic domain,2 mg2+-free form
79c3kpbA_



not modelled 99.7 19 PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein mj0100;
PDBTitle: crystal structure of the cbs domain pair of protein mj01002 in complex with 5 -methylthioadenosine and s-adenosyl-l-3 methionine.
80c3kxrA_



not modelled 99.7 18 PDB header:transport protein
Chain: A: PDB Molecule:magnesium transporter, putative;
PDBTitle: structure of the cystathionine beta-synthase pair domain of the2 putative mg2+ transporter so5017 from shewanella oneidensis mr-1.
81c3ocmB_



not modelled 99.7 16 PDB header:membrane protein
Chain: B: PDB Molecule:putative membrane protein;
PDBTitle: the crystal structure of a domain from a possible membrane protein of2 bordetella parapertussis
82d2ooxe2



not modelled 99.7 20 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
83d2rc3a1



not modelled 99.7 21 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
84d2riha1



not modelled 99.7 21 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
85d2v8qe1



not modelled 99.7 17 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
86c3l31B_



99.7 30 PDB header:hydrolase
Chain: B: PDB Molecule:probable manganase-dependent inorganic
PDBTitle: crystal structure of the cbs and drtgg domains of the2 regulatory region of clostridium perfringens3 pyrophosphatase complexed with the inhibitor, amp
87c3i0zB_



not modelled 99.7 16 PDB header:isomerase
Chain: B: PDB Molecule:putative tagatose-6-phosphate ketose/aldose isomerase;
PDBTitle: crystal structure of putative putative tagatose-6-phosphate2 ketose/aldose isomerase (np_344614.1) from streptococcus pneumoniae3 tigr4 at 1.70 a resolution
88c3kh5A_



not modelled 99.7 31 PDB header:unknown function
Chain: A: PDB Molecule:protein mj1225;
PDBTitle: crystal structure of protein mj1225 from methanocaldococcus2 jannaschii, a putative archaeal homolog of g-ampk.
89d2ooxe1



not modelled 99.7 13 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
90c2pfiA_



not modelled 99.7 17 PDB header:transport protein
Chain: A: PDB Molecule:chloride channel protein clc-ka;
PDBTitle: crystal structure of the cytoplasmic domain of the human2 chloride channel clc-ka
91c3c3jA_



not modelled 99.7 19 PDB header:isomerase
Chain: A: PDB Molecule:putative tagatose-6-phosphate ketose/aldose isomerase;
PDBTitle: crystal structure of tagatose-6-phosphate ketose/aldose isomerase from2 escherichia coli
92c3fhmD_



not modelled 99.7 31 PDB header:structural genomics, unknown function, n
Chain: D: PDB Molecule:uncharacterized protein atu1752;
PDBTitle: crystal structure of the cbs-domain containing protein atu1752 from2 agrobacterium tumefaciens
93d3ddja2



not modelled 99.7 23 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
94c3oi8B_



not modelled 99.7 13 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of functionally unknown conserved protein domain2 from neisseria meningitidis mc58
95d1zfja4



not modelled 99.6 20 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
96c3ddjA_



not modelled 99.6 15 PDB header:amp-binding protein
Chain: A: PDB Molecule:cbs domain-containing protein;
PDBTitle: crystal structure of a cbs domain-containing protein in complex with2 amp (sso3205) from sulfolobus solfataricus at 1.80 a resolution
97d2yzqa2



not modelled 99.6 14 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
98c2yzqA_



not modelled 99.6 19 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein ph1780;
PDBTitle: crystal structure of uncharacterized conserved protein from2 pyrococcus horikoshii
99d2yvxa2



not modelled 99.5 24 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
100c3fioB_



not modelled 99.0 24 PDB header:nucleotide binding protein, metal bindin
Chain: B: PDB Molecule:a cystathionine beta-synthase domain protein
PDBTitle: crystal structure of a fragment of a cystathionine beta-2 synthase domain protein fused to a zn-ribbon-like domain
101d1jcna4



not modelled 98.4 18 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
102c1zzgB_



not modelled 98.2 22 PDB header:isomerase
Chain: B: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: crystal structure of hypothetical protein tt0462 from thermus2 thermophilus hb8
103c2q8nB_



not modelled 98.2 19 PDB header:isomerase
Chain: B: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: crystal structure of glucose-6-phosphate isomerase (ec2 5.3.1.9) (tm1385) from thermotoga maritima at 1.82 a3 resolution
104d1c7qa_



not modelled 98.1 24 Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
105c3ff1B_



not modelled 98.0 23 PDB header:isomerase
Chain: B: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: structure of glucose 6-phosphate isomerase from staphylococcus aureus
106d1jr1a4



not modelled 97.6 25 Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
107d1gzda_



not modelled 97.4 17 Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
108c3jx9B_



not modelled 97.3 12 PDB header:isomerase
Chain: B: PDB Molecule:putative phosphoheptose isomerase;
PDBTitle: crystal structure of putative phosphoheptose isomerase2 (yp_001815198.1) from exiguobacterium sp. 255-15 at 1.95 a resolution
109c3ljkA_



not modelled 97.3 22 PDB header:isomerase
Chain: A: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: glucose-6-phosphate isomerase from francisella tularensis.
110d1u0fa_



not modelled 97.2 16 Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
111d1iata_



not modelled 97.2 14 Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
112c2wu8A_



not modelled 97.2 22 PDB header:isomerase
Chain: A: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: structural studies of phosphoglucose isomerase from2 mycobacterium tuberculosis h37rv
113d1q50a_



not modelled 97.1 17 Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
114c3hjbA_



not modelled 97.1 19 PDB header:isomerase
Chain: A: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: 1.5 angstrom crystal structure of glucose-6-phosphate isomerase from2 vibrio cholerae.
115d1hm5a_



not modelled 97.1 18 Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
116c3ujhB_



not modelled 97.1 14 PDB header:isomerase
Chain: B: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: crystal structure of substrate-bound glucose-6-phosphate isomerase2 from toxoplasma gondii
117c3nbuC_



not modelled 97.0 19 PDB header:isomerase
Chain: C: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: crystal structure of pgi glucosephosphate isomerase
118c1t10A_



not modelled 96.8 17 PDB header:isomerase
Chain: A: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: phosphoglucose isomerase from leishmania mexicana in complex with2 substrate d-fructose-6-phosphate
119c2o2cB_



not modelled 96.8 18 PDB header:isomerase
Chain: B: PDB Molecule:glucose-6-phosphate isomerase, glycosomal;
PDBTitle: crystal structure of phosphoglucose isomerase from t. brucei2 containing glucose-6-phosphate in the active site
120c3pr3B_



not modelled 96.8 13 PDB header:isomerase
Chain: B: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: crystal structure of plasmodium falciparum glucose-6-phosphate2 isomerase (pf14_0341) in complex with fructose-6-phosphate

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0