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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2v8qE_

Fold library idPDB HeaderMoleculeTitle
c2v8qE_PDB header: transferaseChain: E: PDB Molecule: 5'-amp-activated protein kinase subunit gamma-1;PDBTitle: crystal structure of the regulatory fragment of mammalian2 ampk in complexes with amp


Added to library: Tue Mar 16 13:55:16 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence SNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFIN
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Known secondary structure (DSSP)

S
SBGGGGS
SS




TTSBT
STTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNT
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Known secondary structure (DSSP) TTT


GGG
BSSSS





B
TTSBT
S

TTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence LYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDE
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Known secondary structure (DSSP)
S
SSS

GGGGSBT
SB
SS


TT
B

S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence KGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVV
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Known secondary structure (DSSP) TSBGGGTGGGGGSS




SSBGGG

S


S


TTSBT
S
 .........290.........300....
Sequence DEHDVVKGIVSLSDILQALVLTGG
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Known secondary structure (DSSP)
TTSBSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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