Fold library entry viewer: d1hm5a_

Added to library: Tue Mar 16 13:08:25 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	A	L	T	R	N	P	Q	F	Q	K	L	Q	Q	W	H	R	E	H	G	S	E	L	N	L	R	H	L	F	D	T	D	K	E	R	F	N	H	F	S	L	T	L	N	T	N	H	G	H	I	L	L	D	Y	S	K	N	L	V	T	E	E	V	M	H	M	L	L	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				G	G	G									T		T	T					T							S	S								T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	K	S	R	G	V	E	A	A	R	E	S	M	F	N	G	E	K	I	N	S	T	E	D	R	A	V	L	H	V	A	L	R	N	R	S	N	T	P	I	V	V	D	G	K	D	V	M	P	E	V	N	K	V	L	D	K	M	K	A	F	C	Q	R	V	R	S	G	D	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T										T	T				B	T	T	T	T	B								T		T	T					B	S	S	S	S	B	S																					S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	G	Y	T	G	K	T	I	T	D	V	I	N	I	G	I	G	G	S	D	L	G	P	L	M	V	T	E	A	L	K	P	Y	S	S	G	G	P	R	V	W	F	V	S	N	I	D	G	T	H	I	A	K	T	L	A	C	L	N	P	E	S	S	L	F	I	I	A	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S												G	G	G	T										T	G	G	G		T	T	S									S	S									T	T			G	G	G								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	F	T	T	Q	E	T	I	T	N	A	K	T	A	K	D	W	F	L	L	S	A	K	D	P	S	T	V	A	K	H	F	V	A	L	S	T	N	T	A	K	V	K	E	F	G	I	D	P	Q	N	M	F	E	F	W	D	W	V	G	G	R	Y	S	L	W	S	A	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																							G	G	G									S	S									T			G	G	G						T	T	S		G	G	G		T	T	S	G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	S	I	A	L	H	V	G	F	D	N	F	E	Q	L	L	S	G	A	H	W	M	D	Q	H	F	R	T	T	P	L	E	K	N	A	P	V	L	L	A	M	L	G	I	W	Y	I	N	C	F	G	C	E	T	Q	A	V	L	P	Y	D	Q	Y	L	H	R	F	A	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													S		G	G	G																T	S										S		G	G	G	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	Q	Q	G	D	M	E	S	N	G	K	Y	I	T	K	S	G	A	R	V	D	H	Q	T	G	P	I	V	W	G	E	P	G	T	N	G	Q	H	A	F	Y	Q	L	I	H	Q	G	T	K	M	I	P	C	D	F	L	I	P	V	Q	T	Q	H	P	I	R	K	G	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													B	B	T	T	S		B		S	S											T	T	T	G	G	G	T	T							S	S														S				G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	K	I	L	L	A	N	F	L	A	Q	T	E	A	L	M	K	G	K	S	T	E	E	A	R	K	E	L	Q	A	A	G	K	S	P	E	D	L	M	K	L	L	P	H	K	V	F	E	G	N	R	P	T	N	S	I	V	F	T	K	L	T	P	F	I	L	G	A	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			B												T	T										G	G	G	G		B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Sequence	A	M	Y	E	H	K	I	F	V	Q	G	V	V	W	D	I	N	S	F	D	Q	W	G	V	E	L	G	K	Q	L	A	K	K	I	E	P	E	L	D	G	S	S	P	V	T	S	H	D	S	S	T	N	G	L	I	N	F	I	K	Q	Q	R	E	A	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	B		T	T			G	G	G															S	S	S	S				S	S															T	S

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PDB structure

FASTA sequence

Hidden Markov model

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