Email l.a.kelley@imperial.ac.uk Description P77221 Date Thu Jan 5 12:26:33 GMT 2012 Unique Job ID c338bc5a3c191341

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3clqC_ 100.0 65 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a conserved protein of unknown function from2 enterococcus faecalis v583 2 d1pdza2 74.3 35 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 3 d2akza2 68.4 24 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 4 d2al1a2 65.9 22 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 5 d1wo8a1 60.8 19 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Methylglyoxal synthase, MgsA 6 c1vjtA_ 51.7 9 PDB header:hydrolase Chain: A: PDB Molecule:alpha-glucosidase; PDBTitle: crystal structure of alpha-glucosidase (tm0752) from thermotoga2 maritima at 2.50 a resolution 7 c2cqjA_ 50.2 17 PDB header:rna binding protein Chain: A: PDB Molecule:u3 small nucleolar ribonucleoprotein protein PDBTitle: solution structure of the s4 domain of u3 small nucleolar2 ribonucleoprotein protein imp3 homolog 8 d1alua_ 41.0 15 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Long-chain cytokines 9 d2fyma2 40.7 15 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 10 c2re2A_ 31.9 32 PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein ta1041; PDBTitle: crystal structure of a putative iron-molybdenum cofactor (femo-co)2 dinitrogenase (ta1041m) from thermoplasma acidophilum dsm 1728 at3 1.30 a resolution 11 d1h3fa2 21.9 21 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain 12 d1c06a_ 21.5 36 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Ribosomal protein S4 13 c2y9xG_ 20.4 30 PDB header:oxidoreductase Chain: G: PDB Molecule:lectin-like fold protein; PDBTitle: crystal structure of ppo3, a tyrosinase from agaricus bisporus, in2 deoxy-form that contains additional unknown lectin-like subunit,3 with inhibitor tropolone 14 c2yvqA_ 20.2 18 PDB header:ligase Chain: A: PDB Molecule:carbamoyl-phosphate synthase; PDBTitle: crystal structure of mgs domain of carbamoyl-phosphate2 synthetase from homo sapiens 15 d2pw4a1 19.7 18 Fold:Jann2411-like Superfamily:Jann2411-like Family:Jann2411-like 16 d1b93a_ 19.4 23 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Methylglyoxal synthase, MgsA 17 c3hp7A_ 19.2 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hemolysin, putative; PDBTitle: putative hemolysin from streptococcus thermophilus. 18 c2htmB_ 17.0 19 PDB header:biosynthetic protein Chain: B: PDB Molecule:thiazole biosynthesis protein thig; PDBTitle: crystal structure of ttha0676 from thermus thermophilus hb8 19 c2l58A_ 16.6 40 PDB header:apoptosis Chain: A: PDB Molecule:activator of apoptosis harakiri; PDBTitle: solution structure of the cytosolic fragment 22-53 of bcl-2 member2 harakiri 20 d2gy9d1 16.4 24 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Ribosomal protein S4 21 d1twda_ not modelled 12.7 17 Fold:TIM beta/alpha-barrel Superfamily:CutC-like Family:CutC-like 22 d1nuba2 not modelled 11.7 50 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:EGF/Laminin Family:Follistatin (FS) module N-terminal domain, FS-N 23 c2xzmD_ not modelled 11.6 18 PDB header:ribosome Chain: D: PDB Molecule:ribosomal protein s4 containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 24 c2ldkA_ not modelled 11.5 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of protein aaur_3427 from arthrobacter2 aurescens, northeast structural genomics consortium target aar96 25 d1jh3a_ not modelled 10.5 25 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain 26 d3cuma1 not modelled 10.2 19 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain 27 c3msuA_ not modelled 10.0 20 PDB header:transferase Chain: A: PDB Molecule:citrate synthase; PDBTitle: crystal structure of citrate synthase from francisella tularensis 28 c3d0jA_ not modelled 9.9 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ca_c3497; PDBTitle: crystal structure of conserved protein of unknown function ca_c34972 from clostridium acetobutylicum atcc 824 29 c2d5nB_ not modelled 9.8 17 PDB header:hydrolase, oxidoreductase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: crystal structure of a bifunctional deaminase and reductase2 involved in riboflavin biosynthesis 30 d2hsja1 not modelled 9.8 18 Fold:Flavodoxin-like Superfamily:SGNH hydrolase Family:Acetylhydrolase 31 c2bibA_ not modelled 9.8 17 PDB header:hydrolase Chain: A: PDB Molecule:teichoic acid phosphorylcholine esterase/ choline binding PDBTitle: crystal structure of the complete modular teichioic acid2 phosphorylcholine esterase pce (cbpe) from streptococcus3 pneumoniae 32 c3iefA_ not modelled 9.8 33 PDB header:transferase, rna binding protein Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna guanine-n1-methyltransferase from2 bartonella henselae using mpcs. 33 d2o34a1 not modelled 9.7 57 Fold:T-fold Superfamily:ApbE-like Family:DVU1097-like 34 c2bs5A_ not modelled 9.4 25 PDB header:sugar binding protein Chain: A: PDB Molecule:fucose-binding lectin protein; PDBTitle: lectin from ralstonia solanacearum complexed with 2-2 fucosyllactose 35 d1p9ka_ not modelled 8.6 24 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like 36 c1u8xX_ not modelled 8.4 21 PDB header:hydrolase Chain: X: PDB Molecule:maltose-6'-phosphate glucosidase; PDBTitle: crystal structure of glva from bacillus subtilis, a metal-requiring,2 nad-dependent 6-phospho-alpha-glucosidase 37 c3fefB_ not modelled 8.3 24 PDB header:hydrolase Chain: B: PDB Molecule:putative glucosidase lpld; PDBTitle: crystal structure of putative glucosidase lpld from2 bacillus subtilis 38 d1vmda_ not modelled 8.3 19 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Methylglyoxal synthase, MgsA 39 d2isba1 not modelled 7.8 17 Fold:The "swivelling" beta/beta/alpha domain Superfamily:FumA C-terminal domain-like Family:FumA C-terminal domain-like 40 d1vjta1 not modelled 7.7 7 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 41 c3n5mD_ not modelled 7.4 20 PDB header:transferase Chain: D: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystals structure of a bacillus anthracis aminotransferase 42 d2uubd1 not modelled 7.3 35 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Ribosomal protein S4 43 c2i7uA_ not modelled 7.2 43 PDB header:de novo protein/ligand binding protein Chain: A: PDB Molecule:four-alpha-helix bundle; PDBTitle: structural and dynamical analysis of a four-alpha-helix2 bundle with designed anesthetic binding pockets 44 d1vk4a_ not modelled 7.0 15 Fold:Ribokinase-like Superfamily:Ribokinase-like Family:Ribokinase-like 45 c1s1hD_ not modelled 6.8 32 PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein s9-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. 46 d2jeka1 not modelled 6.5 32 Fold:Rv1873-like Superfamily:Rv1873-like Family:Rv1873-like 47 c2iunD_ not modelled 6.4 25 PDB header:viral protein Chain: D: PDB Molecule:avian adenovirus celo long fibre; PDBTitle: structure of the c-terminal head domain of the avian2 adenovirus celo long fibre (p21 crystal form) 48 c3bbnD_ not modelled 6.3 25 PDB header:ribosome Chain: D: PDB Molecule:ribosomal protein s4; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 49 c1oy5B_ not modelled 6.3 32 PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (m1g37) methyltransferase from aquifex2 aeolicus 50 d1oy5a_ not modelled 6.3 32 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 51 c1s6yA_ not modelled 6.3 31 PDB header:hydrolase Chain: A: PDB Molecule:6-phospho-beta-glucosidase; PDBTitle: 2.3a crystal structure of phospho-beta-glucosidase 52 d1s4da_ not modelled 6.1 19 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 53 c2k4mA_ not modelled 6.1 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0146 protein mth_1000; PDBTitle: solution nmr structure of m. thermoautotrophicum protein2 mth_1000, northeast structural genomics consortium target3 tr8 54 c3btpA_ not modelled 6.0 43 PDB header:dna binding protein, chaperone Chain: A: PDB Molecule:single-strand dna-binding protein; PDBTitle: crystal structure of agrobacterium tumefaciens vire2 in complex with2 its chaperone vire1: a novel fold and implications for dna binding 55 c3brtC_ not modelled 5.9 33 PDB header:transferase/transcription Chain: C: PDB Molecule:inhibitor of nuclear factor kappa-b kinase PDBTitle: nemo/ikk association domain structure 56 c2akmA_ not modelled 5.9 23 PDB header:lyase Chain: A: PDB Molecule:gamma enolase; PDBTitle: fluoride inhibition of enolase: crystal structure of the2 inhibitory complex 57 d1t6la2 not modelled 5.8 56 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 58 c3p04A_ not modelled 5.8 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 59 c3bboG_ not modelled 5.7 46 PDB header:ribosome Chain: G: PDB Molecule:ribosomal protein l4; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 60 c2q7aA_ not modelled 5.5 43 PDB header:heme binding protein Chain: A: PDB Molecule:cell surface heme-binding protein; PDBTitle: crystal structure of the cell surface heme transfer protein shp 61 c2w40C_ not modelled 5.4 18 PDB header:transferase Chain: C: PDB Molecule:glycerol kinase, putative; PDBTitle: crystal structure of plasmodium falciparum glycerol kinase2 with bound glycerol 62 d1a7ha_ not modelled 5.3 23 Fold:gamma-Crystallin-like Superfamily:gamma-Crystallin-like Family:Crystallins/Ca-binding development proteins 63 d1s0aa_ not modelled 5.3 32 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 64 c3fd0B_ not modelled 5.1 20 PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution 65 d2cr9a1 not modelled 5.1 21 Fold:WGR domain-like Superfamily:WGR domain-like Family:WGR domain 66 c2lf2A_ not modelled 5.1 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of the ahsa1-like protein chu_1110 from2 cytophaga hutchinsonii, northeast structural genomics consortium3 target chr152