Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	N	T	V	C	T	H	C	Q	A	I	N	R	I	P	D	D	R	I	E	D	A	A	K	C	G	R	C	G	H	D	L	F	D	G	E	V	I	N	A	T	G	E	T	L	D	K	L	L	K	D	D	L	P	V	V	I	D	F	W
Secondary structure
SS confidence
Disorder		?				?	?							?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	P	W	C	G	P	C	R	N	F	A	P	I	F	E	D	V	A	Q	E	R	S	G	K	V	R	F	V	K	V	N	T	E	A	E	R	E	L	S	S	R	F	G	I	R	S	I	P	T	I	M	I	F	K	N	G	Q	V	V	D
Secondary structure
SS confidence
Disorder																																											?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Sequence		M	L	N	G	A	V	P	K	A	P	F	D	S	W	L	N	E	S	L
Secondary structure
SS confidence
Disorder		?		?															?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3p2a chain B Region: 2 - 139 Aligned: 138 Modelled: 138 Confidence: 100.0% Identity: 76% PDB header:oxidoreductase Chain: B: PDB Molecule:putative thioredoxin-like protein; PDBTitle: crystal structure of thioredoxin 2 from yersinia pestis Phyre2 PDB 2ppt chain A Region: 1 - 139 Aligned: 139 Modelled: 139 Confidence: 100.0% Identity: 36% PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin-2; PDBTitle: crystal structure of thioredoxin-2 Phyre2 PDB 3p2a chain A Region: 2 - 139 Aligned: 138 Modelled: 138 Confidence: 100.0% Identity: 76% PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin-like protein; PDBTitle: crystal structure of thioredoxin 2 from yersinia pestis Phyre2 PDB 3dxb chain E Region: 36 - 139 Aligned: 104 Modelled: 104 Confidence: 99.9% Identity: 38% PDB header:splicing, transcription Chain: E: PDB Molecule:thioredoxin n-terminally fused to puf60(uhm); PDBTitle: structure of the uhm domain of puf60 fused to thioredoxin Phyre2 PDB 3hz4 chain A Region: 35 - 139 Aligned: 105 Modelled: 103 Confidence: 99.9% Identity: 23% PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from methanosarcina mazei Phyre2 PDB 1dby chain A Region: 36 - 139 Aligned: 104 Modelled: 104 Confidence: 99.9% Identity: 43% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Thioltransferase Phyre2 PDB 3tco chain A Region: 37 - 139 Aligned: 103 Modelled: 103 Confidence: 99.9% Identity: 35% PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin (trxa-1); PDBTitle: crystallographic and spectroscopic characterization of sulfolobus2 solfataricus trxa1 provide insights into the determinants of3 thioredoxin fold stability Phyre2 PDB 3qdn chain A Region: 35 - 139 Aligned: 105 Modelled: 105 Confidence: 99.9% Identity: 30% PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin protein; PDBTitle: putative thioredoxin protein from salmonella typhimurium Phyre2 PDB 2yzu chain A Region: 36 - 139 Aligned: 104 Modelled: 104 Confidence: 99.9% Identity: 38% PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of oxidized thioredoxin from thermus thermophilus2 hb8 Phyre2 PDB 2voc chain A Region: 36 - 139 Aligned: 103 Modelled: 104 Confidence: 99.9% Identity: 34% PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: thioredoxin a active site mutants form mixed disulfide2 dimers that resemble enzyme-substrate reaction3 intermediate Phyre2 PDB 2trx chain A Region: 34 - 139 Aligned: 106 Modelled: 106 Confidence: 99.9% Identity: 38% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Thioltransferase Phyre2 PDB 2o7k chain A Region: 36 - 139 Aligned: 103 Modelled: 104 Confidence: 99.9% Identity: 32% PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: s. aureus thioredoxin Phyre2 PDB 2i4a chain A Region: 34 - 138 Aligned: 105 Modelled: 105 Confidence: 99.9% Identity: 34% PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from the acidophile2 acetobacter aceti Phyre2 PDB 1thx chain A Region: 34 - 139 Aligned: 106 Modelled: 106 Confidence: 99.9% Identity: 27% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Thioltransferase Phyre2 PDB 1nw2 chain A Region: 36 - 139 Aligned: 104 Modelled: 104 Confidence: 99.9% Identity: 39% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Thioltransferase Phyre2 PDB 2l5l chain A Region: 34 - 139 Aligned: 106 Modelled: 106 Confidence: 99.9% Identity: 42% PDB header:transport protein Chain: A: PDB Molecule:thioredoxin; PDBTitle: solution structure of thioredoxin from bacteroides vulgatus Phyre2 PDB 1fb6 chain A Region: 37 - 139 Aligned: 103 Modelled: 103 Confidence: 99.9% Identity: 39% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Thioltransferase Phyre2 PDB 3gnj chain D Region: 34 - 139 Aligned: 106 Modelled: 104 Confidence: 99.9% Identity: 20% PDB header:structural genomics, unknown function Chain: D: PDB Molecule:thioredoxin domain protein; PDBTitle: the crystal structure of a thioredoxin-related protein from2 desulfitobacterium hafniense dcb Phyre2 PDB 2r2j chain A Region: 38 - 139 Aligned: 102 Modelled: 102 Confidence: 99.9% Identity: 22% PDB header:chaperone Chain: A: PDB Molecule:thioredoxin domain-containing protein 4; PDBTitle: crystal structure of human erp44 Phyre2 PDB 1t00 chain A Region: 34 - 139 Aligned: 106 Modelled: 106 Confidence: 99.9% Identity: 37% PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: the structure of thioredoxin from s. coelicolor Phyre2 1 c3p2aB_ 2 c2pptA_ 3 c3p2aA_ 4 c3dxbE_ 5 c3hz4A_ 6 d1dbya_ 7 c3tcoA_ 8 c3qdnA_ 9 c2yzuA_ 10 c2vocA_ 11 d2trxa_ 12 c2o7kA_ 13 c2i4aA_ 14 d1thxa_ 15 d1nw2a_ 16 c2l5lA_ 17 d1fb6a_ 18 c3gnjD_ 19 c2r2jA_ 20 c1t00A_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3p2aB_ 100.0 76 PDB header:oxidoreductase Chain: B: PDB Molecule:putative thioredoxin-like protein; PDBTitle: crystal structure of thioredoxin 2 from yersinia pestis 2 c2pptA_ 100.0 36 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin-2; PDBTitle: crystal structure of thioredoxin-2 3 c3p2aA_ 100.0 76 PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin-like protein; PDBTitle: crystal structure of thioredoxin 2 from yersinia pestis 4 c3dxbE_ 99.9 38 PDB header:splicing, transcription Chain: E: PDB Molecule:thioredoxin n-terminally fused to puf60(uhm); PDBTitle: structure of the uhm domain of puf60 fused to thioredoxin 5 c3hz4A_ 99.9 23 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from methanosarcina mazei 6 d1dbya_ 99.9 43 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 7 c3tcoA_ 99.9 35 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin (trxa-1); PDBTitle: crystallographic and spectroscopic characterization of sulfolobus2 solfataricus trxa1 provide insights into the determinants of3 thioredoxin fold stability 8 c3qdnA_ 99.9 30 PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin protein; PDBTitle: putative thioredoxin protein from salmonella typhimurium 9 c2yzuA_ 99.9 38 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of oxidized thioredoxin from thermus thermophilus2 hb8 10 c2vocA_ 99.9 34 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: thioredoxin a active site mutants form mixed disulfide2 dimers that resemble enzyme-substrate reaction3 intermediate 11 d2trxa_ 99.9 38 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 12 c2o7kA_ 99.9 32 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: s. aureus thioredoxin 13 c2i4aA_ 99.9 34 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from the acidophile2 acetobacter aceti 14 d1thxa_ 99.9 27 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 15 d1nw2a_ 99.9 39 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 16 c2l5lA_ 99.9 42 PDB header:transport protein Chain: A: PDB Molecule:thioredoxin; PDBTitle: solution structure of thioredoxin from bacteroides vulgatus 17 d1fb6a_ 99.9 39 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 18 c3gnjD_ 99.9 20 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:thioredoxin domain protein; PDBTitle: the crystal structure of a thioredoxin-related protein from2 desulfitobacterium hafniense dcb 19 c2r2jA_ 99.9 22 PDB header:chaperone Chain: A: PDB Molecule:thioredoxin domain-containing protein 4; PDBTitle: crystal structure of human erp44 20 c1t00A_ 99.9 37 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: the structure of thioredoxin from s. coelicolor 21 c2e0qA_ not modelled 99.9 36 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of k53e thioredoxin from sulfolobus2 tokodaii strain7 22 c2i1uA_ not modelled 99.9 36 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: mycobacterium tuberculosis thioredoxin c 23 d1ep7a_ not modelled 99.9 35 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 24 c1w89E_ not modelled 99.9 29 PDB header:electron transport Chain: E: PDB Molecule:thioredoxin; PDBTitle: structure of the reduced form of human thioredoxin 2 25 c3apoA_ not modelled 99.9 23 PDB header:oxidoreductase Chain: A: PDB Molecule:dnaj homolog subfamily c member 10; PDBTitle: crystal structure of full-length erdj5 26 c1x5dA_ not modelled 99.9 33 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a6; PDBTitle: the solution structure of the second thioredoxin-like2 domain of human protein disulfide-isomerase a6 27 d1xwaa_ not modelled 99.9 26 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 28 c2l6dA_ not modelled 99.9 18 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: solution structure of desulfothioredoxin from desulfovibrio vulgaris2 hildenborough in its reduced form 29 d1f9ma_ not modelled 99.9 30 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 30 c3hypB_ not modelled 99.9 36 PDB header:electron transport Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of bacteroides fragilis trxp_s105g mutant 31 d1xfla_ not modelled 99.9 38 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 32 c3f8uA_ not modelled 99.9 26 PDB header:immune system/isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a3erp57; PDBTitle: tapasin/erp57 heterodimer 33 c2albA_ not modelled 99.9 26 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a3; PDBTitle: nmr structure of the n-terminal domain a of the2 glycoprotein chaperone erp57 34 d1m7ta_ not modelled 99.9 34 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 35 c2b5eA_ not modelled 99.9 22 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase; PDBTitle: crystal structure of yeast protein disulfide isomerase 36 c1a8yA_ not modelled 99.9 18 PDB header:calcium-binding protein Chain: A: PDB Molecule:calsequestrin; PDBTitle: crystal structure of calsequestrin from rabbit skeletal muscle2 sarcoplasmic reticulum at 2.4 a resolution 37 c2vafA_ not modelled 99.9 13 PDB header:metal-binding protein Chain: A: PDB Molecule:calsequestrin-2; PDBTitle: crystal structure of human cardiac calsequestrin 38 d1r26a_ not modelled 99.9 26 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 39 d1oaza_ not modelled 99.9 33 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 40 d1syra_ not modelled 99.9 30 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 41 c2wz9A_ not modelled 99.9 30 PDB header:protein binding Chain: A: PDB Molecule:glutaredoxin-3; PDBTitle: crystal structure of the thioredoxin domain of human txnl2 42 c3ed3A_ not modelled 99.9 24 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase mpd1; PDBTitle: crystal structure of the yeast dithiol/disulfide2 oxidoreductase mpd1p 43 c2j23A_ not modelled 99.9 35 PDB header:immune protein Chain: A: PDB Molecule:thioredoxin; PDBTitle: cross-reactivity and crystal structure of malassezia2 sympodialis thioredoxin (mala s 13), a member of a new pan-3 allergen family 44 d1a8la2 not modelled 99.9 27 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 45 c2vlvA_ not modelled 99.9 33 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin h isoform 2.; PDBTitle: crystal structure of barley thioredoxin h isoform 2 in2 partially radiation-reduced state 46 c3d22A_ not modelled 99.9 29 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin h-type; PDBTitle: crystal structure of a poplar thioredoxin h mutant,2 pttrxh4c61s 47 d1ti3a_ not modelled 99.9 29 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 48 c1sjiA_ not modelled 99.9 14 PDB header:metal binding protein Chain: A: PDB Molecule:calsequestrin, cardiac muscle isoform; PDBTitle: comparing skeletal and cardiac calsequestrin structures and2 their calcium binding: a proposed mechanism for coupled3 calcium binding and protein polymerization 49 d1j08a2 not modelled 99.9 26 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 50 d1gh2a_ not modelled 99.9 21 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 51 c3ul3A_ not modelled 99.9 17 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: structural insights into thioredoxin-2: a component of malaria2 parasite protein secretion machinery 52 c2diyA_ not modelled 99.9 27 PDB header:protein binding Chain: A: PDB Molecule:thioredoxin-like protein 2; PDBTitle: the solution structure of the thioredoxin domain of human2 thioredoxin-like protein 2 53 c1v98A_ not modelled 99.9 38 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure analysis of thioredoxin from thermus thermophilus 54 d1qgva_ not modelled 99.9 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:spliceosomal protein U5-15Kd 55 c2dizA_ not modelled 99.9 26 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin domain-containing protein 5; PDBTitle: the solution structure of the third thioredoxin domain of2 human thioredoxin domain-containing protein 5 56 c3emxB_ not modelled 99.9 25 PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from aeropyrum pernix 57 c3apsA_ not modelled 99.9 29 PDB header:oxidoreductase Chain: A: PDB Molecule:dnaj homolog subfamily c member 10; PDBTitle: crystal structure of trx4 domain of erdj5 58 c2xbqB_ not modelled 99.9 32 PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of reduced schistosoma mansoni2 thioredoxin pre-protein at 1.7 angstrom 59 c2dj1A_ not modelled 99.9 29 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a4; PDBTitle: the solution structure of the first thioredoxin domain of2 mouse protein disulfide-isomerase a4 60 c2dmlA_ not modelled 99.9 22 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a6; PDBTitle: the solution structure of the first thioredoxin domain of2 mouse protein disulfide-isomerase a6 61 c2oe0B_ not modelled 99.9 26 PDB header:electron transport Chain: B: PDB Molecule:thioredoxin-3; PDBTitle: crystal structure of mitochondrial thioredoxin 3 from2 saccharomyces cerevisiae 62 c2vimA_ not modelled 99.9 34 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: x-ray structure of fasciola hepatica thioredoxin 63 d2b5ea4 not modelled 99.9 20 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 64 c2vm2C_ not modelled 99.9 27 PDB header:oxidoreductase Chain: C: PDB Molecule:thioredoxin h isoform 1.; PDBTitle: crystal structure of barley thioredoxin h isoform 12 crystallized using peg as precipitant 65 d2ifqa1 not modelled 99.9 30 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 66 d1a8ya1 not modelled 99.9 22 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Calsequestrin 67 c2dj0A_ not modelled 99.9 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:thioredoxin-related transmembrane protein 2; PDBTitle: the solution structure of the thioredoxin domain of human2 thioredoxin-related transmembrane protein 2 68 c1xbsA_ not modelled 99.9 20 PDB header:transcription, cell cycle Chain: A: PDB Molecule:dim1-like protein; PDBTitle: crystal structure of human dim2: a dim1-like protein 69 c2dj2A_ not modelled 99.9 28 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a4; PDBTitle: the solution structure of the second thioredoxin domain of2 mouse protein disulfide-isomerase a4 70 d1meka_ not modelled 99.9 25 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 71 c2qc7A_ not modelled 99.9 17 PDB header:chaperone Chain: A: PDB Molecule:endoplasmic reticulum protein erp29; PDBTitle: crystal structure of the protein-disulfide isomerase related chaperone2 erp29 72 c1x5eA_ not modelled 99.9 32 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin domain containing protein 1; PDBTitle: the solution structure of the thioredoxin-like domain of2 human thioredoxin-related transmembrane protein 73 d1zmaa1 not modelled 99.9 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 74 c1x5cA_ not modelled 99.8 23 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase; PDBTitle: the solution structure of the second thioredoxin-like2 domain of human protein disulfide-isomerase 75 c2qsiB_ not modelled 99.8 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative hydrogenase expression/formation protein hupg; PDBTitle: crystal structure of putative hydrogenase expression/formation protein2 hupg from rhodopseudomonas palustris cga009 76 c2i9hA_ not modelled 99.8 28 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin i; PDBTitle: nmr solution structure of the reduced form of thioredoxin 12 from yeast (trx1) 77 c2f51B_ not modelled 99.8 24 PDB header:electron transport Chain: B: PDB Molecule:thioredoxin; PDBTitle: structure of trichomonas vaginalis thioredoxin 78 d1g7ea_ not modelled 99.8 20 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ERP29 N domain-like 79 c3h79A_ not modelled 99.8 18 PDB header:unknown function Chain: A: PDB Molecule:thioredoxin-like protein; PDBTitle: crystal structure of trypanosoma cruzi thioredoxin-like hypothetical2 protein q4dv70 80 c2l57A_ not modelled 99.8 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of an uncharacterized thioredoin-like protein from2 clostridium perfringens 81 c2dj3A_ not modelled 99.8 23 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a4; PDBTitle: the solution structure of the third thioredoxin domain of2 mouse protein disulfide-isomerase a4 82 c3idvA_ not modelled 99.8 31 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a4; PDBTitle: crystal structure of the a0a fragment of erp72 83 c2dbcA_ not modelled 99.8 23 PDB header:signaling protein Chain: A: PDB Molecule:unnamed protein product; PDBTitle: solution structure of the thioredoxin-like domain of2 phosducin-like protein 2(pdcl2) 84 d2b5ea1 not modelled 99.8 21 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 85 c1ovnA_ not modelled 99.8 13 PDB header:chaperone Chain: A: PDB Molecule:windbeutel; PDBTitle: crystal structure and functional analysis of drosophila2 wind-- a pdi-related protein 86 d2c0ga2 not modelled 99.8 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ERP29 N domain-like 87 c3apqB_ not modelled 99.8 25 PDB header:oxidoreductase Chain: B: PDB Molecule:dnaj homolog subfamily c member 10; PDBTitle: crystal structure of j-trx1 fragment of erdj5 88 c3dmlA_ not modelled 99.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the periplasmic thioredoxin soxs from2 paracoccus pantotrophus (reduced form) 89 d1fo5a_ not modelled 99.8 24 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 90 d2hfda1 not modelled 99.8 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:HyaE-like 91 c2kucA_ not modelled 99.8 24 PDB header:isomerase Chain: A: PDB Molecule:putative disulphide-isomerase; PDBTitle: solution structure of a putative disulphide-isomerase from bacteroides2 thetaiotaomicron 92 d2djja1 not modelled 99.8 23 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 93 c3cxgA_ not modelled 99.8 20 PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin; PDBTitle: crystal structure of plasmodium falciparum thioredoxin, pfi0790w 94 c3d6iB_ not modelled 99.8 27 PDB header:oxidoreductase Chain: B: PDB Molecule:monothiol glutaredoxin-3; PDBTitle: structure of the thioredoxin-like domain of yeast2 glutaredoxin 3 95 d1a8la1 not modelled 99.8 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 96 c2dmmA_ not modelled 99.8 24 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a3; PDBTitle: the solution structure of the second thioredoxin domain of2 human protein disulfide-isomerase a3 97 c1b9xC_ not modelled 99.8 25 PDB header:signaling protein Chain: C: PDB Molecule:protein (phosducin); PDBTitle: structural analysis of phosducin and its phosphorylation-2 regulated interaction with transducin 98 c3uemA_ not modelled 99.8 20 PDB header:chaperone Chain: A: PDB Molecule:protein disulfide-isomerase; PDBTitle: crystal structure of human pdi bb'a' domains 99 c1j08A_ not modelled 99.8 22 PDB header:isomerase Chain: A: PDB Molecule:glutaredoxin-like protein; PDBTitle: crystal structure of glutaredoxin-like protein from2 pyrococcus horikoshii 100 d1j08a1 not modelled 99.8 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 101 c3kp8A_ not modelled 99.8 16 PDB header:oxidoreductase Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; PDBTitle: the thioredoxin-like domain of a vkor homolog from2 synechococcus sp. 102 d2fwha1 not modelled 99.7 25 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 103 d1nhoa_ not modelled 99.7 23 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 104 d2trcp_ not modelled 99.7 25 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Phosducin 105 d1a0rp_ not modelled 99.7 21 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Phosducin 106 d1v9wa_ not modelled 99.7 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Txnl5-like 107 d1woua_ not modelled 99.7 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Txnl5-like 108 c3f9uA_ not modelled 99.7 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported cytochrome c biogenesis-related protein; PDBTitle: crystal structure of c-terminal domain of putative exported cytochrome2 c biogenesis-related protein from bacteroides fragilis 109 c2hlsB_ not modelled 99.7 18 PDB header:oxidoreductase Chain: B: PDB Molecule:protein disulfide oxidoreductase; PDBTitle: the crystal structure of a protein disulfide oxidoreductase from2 aeropyrum pernix k1 110 c2aytB_ not modelled 99.7 16 PDB header:oxidoreductase Chain: B: PDB Molecule:glutaredoxin-like protein; PDBTitle: the crystal structure of a protein disulfide oxidoreductase from2 aquifex aeolicus 111 d1z5ye1 not modelled 99.7 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 112 c2hyxA_ not modelled 99.7 20 PDB header:unknown function Chain: A: PDB Molecule:protein dipz; PDBTitle: structure of the c-terminal domain of dipz from mycobacterium2 tuberculosis 113 c2fgxA_ not modelled 99.7 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative thioredoxin; PDBTitle: solution nmr structure of protein ne2328 from nitrosomonas2 europaea. northeast structural genomics consortium target3 net3. 114 c3g9bA_ not modelled 99.7 18 PDB header:transferase Chain: A: PDB Molecule:dolichyl-diphosphooligosaccharide-protein PDBTitle: crystal structure of reduced ost6l 115 c1zypB_ not modelled 99.6 10 PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide reductase subunit f; PDBTitle: synchrotron reduced form of the n-terminal domain of2 salmonella typhimurium ahpf 116 c3fk8A_ not modelled 99.6 21 PDB header:isomerase Chain: A: PDB Molecule:disulphide isomerase; PDBTitle: the crystal structure of disulphide isomerase from xylella fastidiosa2 temecula1 117 c2ju5A_ not modelled 99.6 17 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin disulfide isomerase; PDBTitle: dsbh oxidoreductase 118 d1hyua4 not modelled 99.6 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 119 d2b5xa1 not modelled 99.6 23 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 120 c1senA_ not modelled 99.6 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:thioredoxin-like protein p19; PDBTitle: endoplasmic reticulum protein rp19 o95881

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0