Fold library entry viewer: c3apoA_

Added to library: Sat Apr 23 08:58:09 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	Y	S	L	L	G	V	S	K	T	A	S	S	R	E	I	R	Q	A	F	K	K	N	R	A	Y	E	V	L	K	D	E	D	L	R	K	K	Y	D	K	Y	Y	Y	R	Y	D	F	G	I	Y	D	D	D	P	E	I	I	T	L	E	R	R	E	F	D	A	A	V	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T			T	T														T							S								T	T				S	S	S	S	S	T	T	T	T		T	T														T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	E	L	W	F	V	N	F	Y	S	P	G	S	S	H	S	H	D	L	A	P	T	W	R	E	F	A	K	E	V	D	G	L	L	R	I	G	A	V	N	C	G	D	D	R	M	L	C	P	S	L	F	I	F	R	S	G	M	A	A	V	K	Y	N	G	D	R	S	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S									S	S																		T	T	T	T	S							T	T	T		S	S										T	T	S							S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	V	A	F	A	M	Q	H	V	R	S	T	V	T	E	L	S	T	G	N	F	V	N	A	I	E	T	A	F	A	A	G	V	G	W	L	I	T	F	C	S	K	G	E	D	C	L	T	S	Q	T	R	L	R	L	S	G	M	L	D	G	L	V	N	V	G	W	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S																							T										T	T	S															T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	C	D	A	Q	D	S	L	C	K	S	L	T	T	A	Y	F	P	P	G	A	T	L	N	D	R	E	K	S	S	V	L	F	L	N	S	L	D	A	K	E	I	Y	M	E	I	I	H	N	L	P	D	F	E	L	L	S	A	N	Q	L	E	D	R	L	A	H	H	R	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S					T									T	T			S	S	T	T	T	G	G	G	S																			S																T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	F	F	H	F	G	N	D	P	E	L	K	K	L	K	T	L	L	K	N	E	H	I	Q	V	V	R	F	D	C	S	S	A	P	G	I	C	S	D	L	Y	V	F	Q	P	S	L	A	V	F	K	G	Q	G	T	K	E	Y	E	I	H	H	G	K	K	I	L	Y	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	G	G						G	G	G	T								G	G	G								T	T			S								S	S	T	T	S	S						S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	A	F	A	K	E	S	V	N	S	H	V	T	T	L	G	P	Q	N	F	P	A	S	D	K	E	P	W	L	V	D	F	F	A	P	W	S	P	P	S	R	A	L	L	P	E	L	R	K	A	S	T	L	L	Y	G	Q	L	K	V	G	T	L	D	C	T	I	H	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S							T	T	T	S		T	T			S									T	T																		T	T	T	T								T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	C	N	M	Y	N	I	Q	A	Y	P	T	T	V	V	F	N	Q	S	S	I	H	E	Y	E	G	H	H	S	A	E	Q	I	L	E	F	I	E	D	L	R	N	P	S	V	V	S	L	T	P	S	T	F	N	E	L	V	K	Q	R	K	H	D	E	V	W	M	V	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			S	S	S							T	T							S		S														S		S													T	T	T			T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	S	P	W	S	H	P	S	Q	V	L	M	P	E	W	K	R	M	A	R	T	L	T	G	L	I	N	V	G	S	V	D	C	G	Q	Y	H	S	F	C	T	Q	E	N	V	Q	R	Y	P	E	I	R	F	Y	P	Q	K	S	S	K	A	Y	Q	Y	H	S	Y	N	G	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																			T	T	T	S							T	T	T	T							T	T			S	S	S									S	S	S			S							S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	R	D	A	Y	S	L	R	S	W	G	L	G	F	L	P	Q	A	S	I	D	L	T	P	Q	T	F	N	E	K	V	L	Q	G	K	T	H	W	V	V	D	F	Y	A	P	W	S	G	P	S	Q	N	F	A	P	E	F	E	L	L	A	R	M	I	K	G	K	V	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										T	T	S				S												T	T	T		S	S									T	T																			T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.
Sequence	G	K	V	D	C	Q	A	Y	P	Q	T	C	Q	K	A	G	I	K	A	Y	P	S	V	K	L	Y	Q	Y	E	R	A	K	K	S	I	W	E	E	Q	I	N	S	R	D	A	K	T	I	A	A	L	I	Y	G	K	L	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T								T	T			S	S	S									T	T	T	T																							T	T

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PDB structure

FASTA sequence

Hidden Markov model

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