PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1j08A_

Fold library id	PDB Header	Molecule	Title
c1j08A_	PDB header: isomerase	Chain: A: PDB Molecule: glutaredoxin-like protein;	PDBTitle: crystal structure of glutaredoxin-like protein from2 pyrococcus horikoshii

Links to external resources
Added to library: Tue Mar 16 12:46:33 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G L I S E E D K R I I K E E F F S K M V N P V K L I V F I G K E H C Q Y C D Q L K Q L V Q E L S E L T D K L S Y E I V D F D T P E G K E L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T G G G
S
S S S
T T T T
T T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E K Y R I D R A P A T T I T Q D G K D F G V R Y F G I P A G H E F A A F L E D I V D V S K G D T D L M Q D S K E E V S K I D K D V R I L I F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S B T T B
S S
T T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V T P T C P Y C P L A V R M A H K F A I E N T K A G K G K I L G D M V E A I E Y P E W A D Q Y N V M A V P K I V I Q V N G E D K V Q F E G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S T T
T T T
T T T
S S
T T S

. . . . . . . . . 220 . . . . .

Sequence Y P E K M F L E K L L S A L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	L	I	S	E	E	D	K	R	I	I	K	E	E	F	F	S	K	M	V	N	P	V	K	L	I	V	F	I	G	K	E	H	C	Q	Y	C	D	Q	L	K	Q	L	V	Q	E	L	S	E	L	T	D	K	L	S	Y	E	I	V	D	F	D	T	P	E	G	K	E	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												T	G	G	G			S										S	S	S		T	T													T	T		T	T								T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	K	Y	R	I	D	R	A	P	A	T	T	I	T	Q	D	G	K	D	F	G	V	R	Y	F	G	I	P	A	G	H	E	F	A	A	F	L	E	D	I	V	D	V	S	K	G	D	T	D	L	M	Q	D	S	K	E	E	V	S	K	I	D	K	D	V	R	I	L	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S	S	S						B	T	T	B			S					S				T	T															T													T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	T	P	T	C	P	Y	C	P	L	A	V	R	M	A	H	K	F	A	I	E	N	T	K	A	G	K	G	K	I	L	G	D	M	V	E	A	I	E	Y	P	E	W	A	D	Q	Y	N	V	M	A	V	P	K	I	V	I	Q	V	N	G	E	D	K	V	Q	F	E	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		S	S																		T	T											T	T	T							T	T	T			S	S								T	T								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	Y	P	E	K	M	F	L	E	K	L	L	S	A	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T