Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	E	Y	F	D	M	R	K	M	S	V	N	L	W	R	N	A	A	G	E	T	R	E	I	C	T	F	P	P	A	K	R	D	F	Y	W	R	A	S	I	A	S	I	A	A	N	G	E	F	S	L	F	P	G	M	E	R	I	V	T
Secondary structure
SS confidence
Disorder		?			?	?																																						?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		L	L	E	G	G	E	M	L	L	E	S	A	D	R	F	N	H	T	L	K	P	F	Q	P	F	A	F	A	A	D	Q	V	V	K	A	K	L	T	A	G	Q	M	S	M	D	F	N	I	M	T	R	L	D	V	C	K	A	K	V	R
Secondary structure
SS confidence
Disorder															?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		I	A	E	R	T	F	T	T	F	G	S	R	G	G	V	V	F	V	I	N	G	A	W	Q	L	G	D	K	L	L	T	T	D	Q	G	A	C	W	F	D	G	R	H	T	L	R	L	L	Q	P	Q	G	K	L	L	F	S	E	I	N
Secondary structure
SS confidence
Disorder							?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.
Sequence		W	L	A	G	H	S	P	D	Q	V	Q
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3esg chain A Region: 1 - 184 Aligned: 181 Modelled: 184 Confidence: 100.0% Identity: 26% PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of hutd from pseudomonas fluorescens sbw25 Phyre2 PDB 1yll chain A domain 1 Region: 5 - 182 Aligned: 177 Modelled: 178 Confidence: 100.0% Identity: 24% Fold: Double-stranded beta-helix Superfamily: RmlC-like cupins Family: PA5104-like Phyre2 PDB 1vj2 chain A Region: 1 - 113 Aligned: 109 Modelled: 113 Confidence: 95.2% Identity: 8% Fold: Double-stranded beta-helix Superfamily: RmlC-like cupins Family: TM1459-like Phyre2 PDB 1y9q chain A domain 2 Region: 16 - 112 Aligned: 94 Modelled: 93 Confidence: 94.4% Identity: 12% Fold: Double-stranded beta-helix Superfamily: RmlC-like cupins Family: Probable transcriptional regulator VC1968, C-terminal domain Phyre2 PDB 3bcw chain B Region: 38 - 111 Aligned: 71 Modelled: 67 Confidence: 93.7% Identity: 17% PDB header:unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a duf861 family protein with a rmlc-like cupin2 fold (bb1179) from bordetella bronchiseptica rb50 at 1.60 a3 resolution Phyre2 PDB 1sq4 chain A Region: 14 - 112 Aligned: 93 Modelled: 92 Confidence: 93.1% Identity: 17% Fold: Double-stranded beta-helix Superfamily: RmlC-like cupins Family: YlbA-like Phyre2 PDB 2pyt chain A domain 1 Region: 1 - 116 Aligned: 110 Modelled: 103 Confidence: 92.2% Identity: 9% Fold: Double-stranded beta-helix Superfamily: RmlC-like cupins Family: EutQ-like Phyre2 PDB 3rns chain A Region: 1 - 180 Aligned: 169 Modelled: 179 Confidence: 91.8% Identity: 14% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis Phyre2 PDB 1tq5 chain A domain 1 Region: 125 - 181 Aligned: 57 Modelled: 57 Confidence: 91.7% Identity: 12% Fold: Double-stranded beta-helix Superfamily: RmlC-like cupins Family: Pirin-like Phyre2 PDB 1y9q chain A Region: 10 - 112 Aligned: 100 Modelled: 99 Confidence: 91.2% Identity: 10% PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, hth_3 family; PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae Phyre2 PDB 1o5u chain A Region: 45 - 110 Aligned: 63 Modelled: 66 Confidence: 90.3% Identity: 13% Fold: Double-stranded beta-helix Superfamily: RmlC-like cupins Family: Hypothetical protein TM1112 Phyre2 PDB 3es4 chain B Region: 45 - 112 Aligned: 65 Modelled: 68 Confidence: 89.7% Identity: 15% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein duf861 with a rmlc-like cupin fold; PDBTitle: crystal structure of protein of unknown function (duf861) with a rmlc-2 like cupin fold (17741406) from agrobacterium tumefaciens str. c583 (dupont) at 1.64 a resolution Phyre2 PDB 1sef chain A Region: 19 - 112 Aligned: 91 Modelled: 94 Confidence: 87.1% Identity: 10% Fold: Double-stranded beta-helix Superfamily: RmlC-like cupins Family: YlbA-like Phyre2 PDB 1sef chain A Region: 19 - 112 Aligned: 91 Modelled: 94 Confidence: 87.1% Identity: 10% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of cupin domain protein ef2996 from enterococcus2 faecalis Phyre2 PDB 3lwc chain A Region: 1 - 99 Aligned: 90 Modelled: 97 Confidence: 87.0% Identity: 12% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics, unknown function2 (yp_766765.1) from rhizobium leguminosarum bv. viciae 3841 at 1.40 a3 resolution Phyre2 PDB 3es1 chain A Region: 16 - 110 Aligned: 78 Modelled: 81 Confidence: 85.6% Identity: 17% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of protein with a cupin-like fold and unknown2 function (yp_001165807.1) from novosphingobium aromaticivorans dsm3 12444 at 1.91 a resolution Phyre2 PDB 3ht2 chain A Region: 2 - 110 Aligned: 107 Modelled: 109 Confidence: 80.6% Identity: 11% PDB header:lyase Chain: A: PDB Molecule:remf protein; PDBTitle: zink containing polyketide cyclase remf from streptomyces2 resistomycificus Phyre2 PDB 1yhf chain A domain 1 Region: 2 - 114 Aligned: 100 Modelled: 107 Confidence: 76.9% Identity: 13% Fold: Double-stranded beta-helix Superfamily: RmlC-like cupins Family: TM1287-like Phyre2 PDB 3myx chain A Region: 22 - 110 Aligned: 82 Modelled: 89 Confidence: 76.5% Identity: 16% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pspto_0244; PDBTitle: crystal structure of a pspto_0244 (protein with unknown function which2 belongs to pfam duf861 family) from pseudomonas syringae pv. tomato3 str. dc3000 at 1.30 a resolution Phyre2 PDB 2bno chain A Region: 14 - 101 Aligned: 87 Modelled: 88 Confidence: 74.7% Identity: 11% PDB header:oxidoreductase Chain: A: PDB Molecule:epoxidase; PDBTitle: the structure of hydroxypropylphosphonic acid epoxidase2 from s. wedmorenis. Phyre2 1 c3esgA_ 2 d1ylla1 3 d1vj2a_ 4 d1y9qa2 5 c3bcwB_ 6 d1sq4a_ 7 d2pyta1 8 c3rnsA_ 9 d1tq5a1 10 c1y9qA_ 11 d1o5ua_ 12 c3es4B_ 13 d1sefa_ 14 c1sefA_ 15 c3lwcA_ 16 c3es1A_ 17 c3ht2A_ 18 d1yhfa1 19 c3myxA_ 20 c2bnoA_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3esgA_ 100.0 26 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of hutd from pseudomonas fluorescens sbw25 2 d1ylla1 100.0 24 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:PA5104-like 3 d1vj2a_ 95.2 8 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1459-like 4 d1y9qa2 94.4 12 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Probable transcriptional regulator VC1968, C-terminal domain 5 c3bcwB_ 93.7 17 PDB header:unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a duf861 family protein with a rmlc-like cupin2 fold (bb1179) from bordetella bronchiseptica rb50 at 1.60 a3 resolution 6 d1sq4a_ 93.1 17 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 7 d2pyta1 92.2 9 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:EutQ-like 8 c3rnsA_ 91.8 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis 9 d1tq5a1 91.7 12 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Pirin-like 10 c1y9qA_ 91.2 10 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, hth_3 family; PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae 11 d1o5ua_ 90.3 13 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Hypothetical protein TM1112 12 c3es4B_ 89.7 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein duf861 with a rmlc-like cupin fold; PDBTitle: crystal structure of protein of unknown function (duf861) with a rmlc-2 like cupin fold (17741406) from agrobacterium tumefaciens str. c583 (dupont) at 1.64 a resolution 13 d1sefa_ 87.1 10 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 14 c1sefA_ 87.1 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of cupin domain protein ef2996 from enterococcus2 faecalis 15 c3lwcA_ 87.0 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics, unknown function2 (yp_766765.1) from rhizobium leguminosarum bv. viciae 3841 at 1.40 a3 resolution 16 c3es1A_ 85.6 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of protein with a cupin-like fold and unknown2 function (yp_001165807.1) from novosphingobium aromaticivorans dsm3 12444 at 1.91 a resolution 17 c3ht2A_ 80.6 11 PDB header:lyase Chain: A: PDB Molecule:remf protein; PDBTitle: zink containing polyketide cyclase remf from streptomyces2 resistomycificus 18 d1yhfa1 76.9 13 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 19 c3myxA_ 76.5 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pspto_0244; PDBTitle: crystal structure of a pspto_0244 (protein with unknown function which2 belongs to pfam duf861 family) from pseudomonas syringae pv. tomato3 str. dc3000 at 1.30 a resolution 20 c2bnoA_ 74.7 11 PDB header:oxidoreductase Chain: A: PDB Molecule:epoxidase; PDBTitle: the structure of hydroxypropylphosphonic acid epoxidase2 from s. wedmorenis. 21 d1y3ta1 not modelled 74.4 6 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Quercetin 2,3-dioxygenase-like 22 d1rc6a_ not modelled 71.5 11 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 23 c2i45C_ not modelled 64.8 9 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein nmb1881 from neisseria meningitidis 24 d2f4pa1 not modelled 63.6 11 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 25 c3kgzA_ not modelled 56.5 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: crystal structure of a cupin 2 conserved barrel domain protein from2 rhodopseudomonas palustris 26 d2phla2 not modelled 55.8 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 27 c2pfwB_ not modelled 54.4 13 PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution 28 c3ibmB_ not modelled 53.4 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila 29 c3h7yA_ not modelled 49.6 14 PDB header:biosynthetic protein Chain: A: PDB Molecule:bacilysin biosynthesis protein bacb; PDBTitle: crystal structure of bacb, an enzyme involved in bacilysin synthesis,2 in tetragonal form 30 c2gu9B_ not modelled 48.2 15 PDB header:immune system Chain: B: PDB Molecule:tetracenomycin polyketide synthesis protein; PDBTitle: crystal structure of xc5357 from xanthomonas campestris: a2 putative tetracenomycin polyketide synthesis protein3 adopting a novel cupin subfamily structure 31 c3d82A_ not modelled 42.9 9 PDB header:metal binding protein Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a cupin-2 domain containing protein (sfri_3543)2 from shewanella frigidimarina ncimb 400 at 2.05 a resolution 32 d2bnma2 not modelled 42.4 9 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1459-like 33 c2o8qA_ not modelled 39.5 10 PDB header:metal binding protein Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a protein with a cupin-like fold and unknown2 function (bxe_c0505) from burkholderia xenovorans lb400 at 1.55 a3 resolution 34 d1v70a_ not modelled 36.8 12 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 35 d1j1la_ not modelled 34.9 11 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Pirin-like 36 c3fjsC_ not modelled 31.5 15 PDB header:biosynthetic protein Chain: C: PDB Molecule:uncharacterized protein with rmlc-like cupin fold; PDBTitle: crystal structure of a putative biosynthetic protein with rmlc-like2 cupin fold (reut_b4087) from ralstonia eutropha jmp134 at 1.90 a3 resolution 37 d1dgwa_ not modelled 29.1 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 38 d1sfna_ not modelled 28.3 13 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 39 d2phla1 not modelled 27.5 15 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 40 d1o4ta_ not modelled 23.8 9 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 41 c3fljA_ not modelled 23.4 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein conserved in bacteria with a PDBTitle: crystal structure of uncharacterized protein conserved in bacteria2 with a cystatin-like fold (yp_168589.1) from silicibacter pomeroyi3 dss-3 at 2.00 a resolution 42 c3o14B_ not modelled 23.2 14 PDB header:gene regulation Chain: B: PDB Molecule:anti-ecfsigma factor, chrr; PDBTitle: crystal structure of an anti-ecfsigma factor, chrr (maqu_0586) from2 marinobacter aquaeolei vt8 at 1.70 a resolution 43 c2fqpD_ not modelled 20.0 6 PDB header:metal binding protein Chain: D: PDB Molecule:hypothetical protein bp2299; PDBTitle: crystal structure of a cupin domain (bp2299) from bordetella pertussis2 tohama i at 1.80 a resolution 44 c3prdA_ not modelled 19.1 14 PDB header:chaperone, isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase; PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26 45 c3h1yA_ not modelled 17.1 21 PDB header:isomerase Chain: A: PDB Molecule:mannose-6-phosphate isomerase; PDBTitle: crystal structure of mannose 6-phosphate isomerase from2 salmonella typhimurium bound to substrate (f6p)and metal3 atom (zn) 46 d1uija1 not modelled 16.5 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 47 d1uika1 not modelled 16.3 15 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 48 c3cewA_ not modelled 16.1 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized cupin protein; PDBTitle: crystal structure of a cupin protein (bf4112) from bacteroides2 fragilis. northeast structural genomics consortium target bfr205 49 c2vqaC_ not modelled 16.1 9 PDB header:metal-binding protein Chain: C: PDB Molecule:sll1358 protein; PDBTitle: protein-folding location can regulate mn versus cu- or zn-2 binding. crystal structure of mnca. 50 c1cauB_ not modelled 15.6 18 PDB header:seed storage protein Chain: B: PDB Molecule:canavalin; PDBTitle: determination of three crystal structures of canavalin by molecular2 replacement 51 d1b7yb4 not modelled 15.5 20 Fold:Ferredoxin-like Superfamily:Anticodon-binding domain of PheRS Family:Anticodon-binding domain of PheRS 52 c2vecA_ not modelled 15.1 14 PDB header:cytosolic protein Chain: A: PDB Molecule:pirin-like protein yhak; PDBTitle: the crystal structure of the protein yhak from escherichia2 coli 53 d1jjcb4 not modelled 13.3 20 Fold:Ferredoxin-like Superfamily:Anticodon-binding domain of PheRS Family:Anticodon-binding domain of PheRS 54 c3h8uA_ not modelled 12.7 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein with double-stranded PDBTitle: crystal structure of uncharacterized conserved protein with double-2 stranded beta-helix domain (yp_001338853.1) from klebsiella3 pneumoniae subsp. pneumoniae mgh 78578 at 1.80 a resolution 55 c3sf5D_ not modelled 10.8 18 PDB header:chaperone Chain: D: PDB Molecule:urease accessory protein ureh; PDBTitle: crystal structure of helicobacter pylori urease accessory protein2 uref/h complex 56 d1uija2 not modelled 9.7 20 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 57 d1juha_ not modelled 9.6 11 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Quercetin 2,3-dioxygenase-like 58 c3i7dB_ not modelled 9.4 12 PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase; PDBTitle: crystal structure of sugar phosphate isomerase from a cupin2 superfamily spo2919 from silicibacter pomeroyi (yp_168127.1) from3 silicibacter pomeroyi dss-3 at 2.30 a resolution 59 c2ozjB_ not modelled 9.2 16 PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel; PDBTitle: crystal structure of a cupin superfamily protein (dsy2733) from2 desulfitobacterium hafniense dcb-2 at 1.60 a resolution 60 c3f8xD_ not modelled 9.0 22 PDB header:isomerase Chain: D: PDB Molecule:putative delta-5-3-ketosteroid isomerase; PDBTitle: crystal structure of a putative delta-5-3-ketosteroid isomerase2 (eca2236) from pectobacterium atrosepticum scri1043 at 1.55 a3 resolution 61 c2kdoA_ not modelled 8.9 33 PDB header:rna binding protein Chain: A: PDB Molecule:ribosome maturation protein sbds; PDBTitle: structure of the human shwachman-bodian-diamond syndrome protein, sbds 62 c3ghnA_ not modelled 8.7 16 PDB header:hydrolase Chain: A: PDB Molecule:a disintegrin and metalloproteinase with thrombospondin PDBTitle: crystal structure of the exosite-containing fragment of human adamts132 (form-2) 63 d1lr5a_ not modelled 7.9 10 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 64 c2h6oA_ not modelled 7.6 20 PDB header:viral protein Chain: A: PDB Molecule:major outer envelope glycoprotein gp350; PDBTitle: epstein barr virus major envelope glycoprotein 65 c2q30C_ not modelled 7.2 8 PDB header:unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a rmlc-like cupin protein (dde_2303) from2 desulfovibrio desulfuricans subsp. at 1.94 a resolution 66 d1pmia_ not modelled 7.1 12 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Type I phosphomannose isomerase 67 c3pr9A_ not modelled 6.9 13 PDB header:chaperone Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase; PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26 68 c3l2hD_ not modelled 6.8 15 PDB header:isomerase Chain: D: PDB Molecule:putative sugar phosphate isomerase; PDBTitle: crystal structure of putative sugar phosphate isomerase (afe_0303)2 from acidithiobacillus ferrooxidans atcc 23270 at 1.85 a resolution 69 c3h0mE_ not modelled 6.2 32 PDB header:ligase Chain: E: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase PDBTitle: structure of trna-dependent amidotransferase gatcab from2 aquifex aeolicus 70 d1uika2 not modelled 5.7 20 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0