Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP75987
DateThu Jan 5 12:16:57 GMT 2012
Unique Job IDb831ff2614fd1d0d

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2jsoA_
Top template information
PDB header:signaling protein
Chain: A: PDB Molecule:polymyxin resistance protein pmrd;
PDBTitle: antimicrobial resistance protein
Confidence and coverage
Confidence: 96.9% Coverage: 69%
74 residues ( 69% of your sequence) have been modelled with 96.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MKWIVIDTVIQPTCGISFSAIWGNMKMIIWYQSTIFLPPGSIFTPVKSGIILKDKEYPIT
Secondary structure 














SS confidence 



























































Disorder  ??


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   .........70.........80.........90.........100.......
Sequence  IYHIAPFNKDLWSLLKSSQECPPGESKITNKCLHNSCIIKICPYGLK
Secondary structure 





















SS confidence 














































Disorder 














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?????
Disorder confidence 














































 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2jso chain A

3D model

Region: 1 - 74
Aligned: 74
Modelled: 74
Confidence: 96.9%
Identity: 19%
PDB header:signaling protein
Chain: A: PDB Molecule:polymyxin resistance protein pmrd;
PDBTitle: antimicrobial resistance protein

Phyre2

PDB 2rqx chain A

3D model

Region: 1 - 72
Aligned: 72
Modelled: 72
Confidence: 96.7%
Identity: 17%
PDB header:signaling protein
Chain: A: PDB Molecule:polymyxin b resistance protein;
PDBTitle: solution nmr structure of pmrd from klebsiella pneumoniae

Phyre2

PDB 2k75 chain A

3D model

Region: 2 - 61
Aligned: 57
Modelled: 60
Confidence: 59.1%
Identity: 7%
PDB header:dna binding protein
Chain: A: PDB Molecule:uncharacterized protein ta0387;
PDBTitle: solution nmr structure of the ob domain of ta0387 from2 thermoplasma acidophilum. northeast structural genomics3 consortium target tar80b.

Phyre2

PDB 2ken chain A

3D model

Region: 23 - 61
Aligned: 39
Modelled: 39
Confidence: 35.7%
Identity: 15%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved protein;
PDBTitle: solution nmr structure of the ob domain (residues 67-166)2 of mm0293 from methanosarcina mazei. northeast structural3 genomics consortium target mar214a.

Phyre2

PDB 1giq chain A domain 2

3D model

Region: 32 - 61
Aligned: 30
Modelled: 30
Confidence: 27.9%
Identity: 17%
Fold: ADP-ribosylation
Superfamily: ADP-ribosylation
Family: ADP-ribosylating toxins

Phyre2

PDB 1r45 chain A

3D model

Region: 32 - 60
Aligned: 29
Modelled: 29
Confidence: 25.3%
Identity: 21%
Fold: ADP-ribosylation
Superfamily: ADP-ribosylation
Family: ADP-ribosylating toxins

Phyre2

PDB 3bw8 chain B

3D model

Region: 32 - 60
Aligned: 29
Modelled: 29
Confidence: 25.0%
Identity: 28%
PDB header:transferase
Chain: B: PDB Molecule:mono-adp-ribosyltransferase c3;
PDBTitle: crystal structure of the clostridium limosum c3 exoenzyme

Phyre2

PDB 1xzz chain A

3D model

Region: 36 - 103
Aligned: 51
Modelled: 51
Confidence: 24.7%
Identity: 22%
PDB header:membrane protein
Chain: A: PDB Molecule:inositol 1,4,5-trisphosphate receptor type 1;
PDBTitle: crystal structure of the ligand binding suppressor domain of type 12 inositol 1,4,5-trisphosphate receptor

Phyre2

PDB 3dm3 chain A

3D model

Region: 22 - 66
Aligned: 45
Modelled: 45
Confidence: 23.7%
Identity: 11%
PDB header:replication
Chain: A: PDB Molecule:replication factor a;
PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e

Phyre2

PDB 1y0j chain B domain 1

3D model

Region: 10 - 22
Aligned: 13
Modelled: 13
Confidence: 20.5%
Identity: 38%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: C2HC finger

Phyre2

PDB 1o7i chain A

3D model

Region: 23 - 61
Aligned: 39
Modelled: 39
Confidence: 18.8%
Identity: 10%
Fold: OB-fold
Superfamily: Nucleic acid-binding proteins
Family: Single strand DNA-binding domain, SSB

Phyre2

PDB 2k9o chain A

3D model

Region: 78 - 102
Aligned: 25
Modelled: 25
Confidence: 18.2%
Identity: 36%
PDB header:toxin
Chain: A: PDB Molecule:vm24 scorpion toxin;
PDBTitle: solution structure of vm24 synthetic scorpion toxin

Phyre2

PDB 1wdi chain A

3D model

Region: 36 - 51
Aligned: 16
Modelled: 16
Confidence: 18.1%
Identity: 38%
Fold: QueA-like
Superfamily: QueA-like
Family: QueA-like

Phyre2

PDB 2b68 chain A

3D model

Region: 81 - 102
Aligned: 22
Modelled: 22
Confidence: 17.6%
Identity: 36%
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin;
PDBTitle: solution structure of the recombinant crassostrea gigas2 defensin

Phyre2

PDB 1giq chain A domain 1

3D model

Region: 32 - 61
Aligned: 29
Modelled: 30
Confidence: 17.2%
Identity: 17%
Fold: ADP-ribosylation
Superfamily: ADP-ribosylation
Family: ADP-ribosylating toxins

Phyre2

PDB 1hvw chain A

3D model

Region: 75 - 97
Aligned: 23
Modelled: 23
Confidence: 16.2%
Identity: 30%
PDB header:toxin
Chain: A: PDB Molecule:omega-atracotoxin-hv1a;
PDBTitle: hairpinless mutant of omega-atracotoxin-hv1a

Phyre2

PDB 1hvw chain A

3D model

Region: 75 - 97
Aligned: 23
Modelled: 23
Confidence: 16.2%
Identity: 30%
Fold: Knottins (small inhibitors, toxins, lectins)
Superfamily: omega toxin-like
Family: Spider toxins

Phyre2

PDB 2k6u chain A

3D model

Region: 99 - 105
Aligned: 7
Modelled: 7
Confidence: 16.0%
Identity: 57%
PDB header:hormone
Chain: A: PDB Molecule:insulin-like 3 a chain;
PDBTitle: the solution structure of a conformationally restricted2 fully active derivative of the human relaxin-like factor3 (rlf)

Phyre2

PDB 2apj chain A domain 1

3D model

Region: 25 - 34
Aligned: 10
Modelled: 10
Confidence: 15.9%
Identity: 40%
Fold: Flavodoxin-like
Superfamily: SGNH hydrolase
Family: Putative acetylxylan esterase-like

Phyre2

PDB 1i4o chain C

3D model

Region: 33 - 49
Aligned: 17
Modelled: 14
Confidence: 15.1%
Identity: 12%
PDB header:apoptosis/hydrolase
Chain: C: PDB Molecule:baculoviral iap repeat-containing protein 4;
PDBTitle: crystal structure of the xiap/caspase-7 complex

Phyre2
1

c2jsoA_
2

c2rqxA_
3

c2k75A_
4

c2kenA_
5

d1giqa2
6

d1r45a_
7

c3bw8B_
8

c1xzzA_
9

c3dm3A_
10

d1y0jb1
11

d1o7ia_
12

c2k9oA_
13

d1wdia_
14

c2b68A_
15

d1giqa1
16

c1hvwA_
17

d1hvwa_
18

c2k6uA_
19

d2apja1
20

c1i4oC_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2jsoA_



96.9 19 PDB header:signaling protein
Chain: A: PDB Molecule:polymyxin resistance protein pmrd;
PDBTitle: antimicrobial resistance protein
2c2rqxA_



96.7 17 PDB header:signaling protein
Chain: A: PDB Molecule:polymyxin b resistance protein;
PDBTitle: solution nmr structure of pmrd from klebsiella pneumoniae
3c2k75A_



59.1 7 PDB header:dna binding protein
Chain: A: PDB Molecule:uncharacterized protein ta0387;
PDBTitle: solution nmr structure of the ob domain of ta0387 from2 thermoplasma acidophilum. northeast structural genomics3 consortium target tar80b.
4c2kenA_



35.7 15 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved protein;
PDBTitle: solution nmr structure of the ob domain (residues 67-166)2 of mm0293 from methanosarcina mazei. northeast structural3 genomics consortium target mar214a.
5d1giqa2



27.9 17 Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
6d1r45a_



25.3 21 Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
7c3bw8B_



25.0 28 PDB header:transferase
Chain: B: PDB Molecule:mono-adp-ribosyltransferase c3;
PDBTitle: crystal structure of the clostridium limosum c3 exoenzyme
8c1xzzA_



24.7 22 PDB header:membrane protein
Chain: A: PDB Molecule:inositol 1,4,5-trisphosphate receptor type 1;
PDBTitle: crystal structure of the ligand binding suppressor domain of type 12 inositol 1,4,5-trisphosphate receptor
9c3dm3A_



23.7 11 PDB header:replication
Chain: A: PDB Molecule:replication factor a;
PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e
10d1y0jb1



20.5 38 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:C2HC finger
11d1o7ia_



18.8 10 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
12c2k9oA_



18.2 36 PDB header:toxin
Chain: A: PDB Molecule:vm24 scorpion toxin;
PDBTitle: solution structure of vm24 synthetic scorpion toxin
13d1wdia_



18.1 38 Fold:QueA-like
Superfamily:QueA-like
Family:QueA-like
14c2b68A_



17.6 36 PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin;
PDBTitle: solution structure of the recombinant crassostrea gigas2 defensin
15d1giqa1



17.2 17 Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
16c1hvwA_



16.2 30 PDB header:toxin
Chain: A: PDB Molecule:omega-atracotoxin-hv1a;
PDBTitle: hairpinless mutant of omega-atracotoxin-hv1a
17d1hvwa_



16.2 30 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Spider toxins
18c2k6uA_



16.0 57 PDB header:hormone
Chain: A: PDB Molecule:insulin-like 3 a chain;
PDBTitle: the solution structure of a conformationally restricted2 fully active derivative of the human relaxin-like factor3 (rlf)
19d2apja1



15.9 40 Fold:Flavodoxin-like
Superfamily:SGNH hydrolase
Family:Putative acetylxylan esterase-like
20c1i4oC_



15.1 12 PDB header:apoptosis/hydrolase
Chain: C: PDB Molecule:baculoviral iap repeat-containing protein 4;
PDBTitle: crystal structure of the xiap/caspase-7 complex
21d1vkya_



not modelled 14.6 31 Fold:QueA-like
Superfamily:QueA-like
Family:QueA-like
22d1bx7a_



not modelled 14.0 42 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Leech antihemostatic proteins
Family:Huristasin-like
23d1yq2a5



not modelled 13.8 6 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
24d1zmba1



not modelled 13.5 30 Fold:Flavodoxin-like
Superfamily:SGNH hydrolase
Family:Putative acetylxylan esterase-like
25c3u0jB_



not modelled 13.3 21 PDB header:transferase
Chain: B: PDB Molecule:type iii effector hopu1;
PDBTitle: crystal structure of adp-ribosyltransferase hopu1 of pseudomonas2 syringae pv. tomato dc3000
26d1fmta1



not modelled 13.0 25 Fold:FMT C-terminal domain-like
Superfamily:FMT C-terminal domain-like
Family:Post formyltransferase domain
27c1yy3A_



not modelled 12.8 13 PDB header:isomerase
Chain: A: PDB Molecule:s-adenosylmethionine:trna ribosyltransferase-
PDBTitle: structure of s-adenosylmethionine:trna ribosyltransferase-2 isomerase (quea)
28d1rm6c2



not modelled 12.1 13 Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
29d1skza1



not modelled 12.1 38 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Leech antihemostatic proteins
Family:Huristasin-like
30d1iray2



not modelled 11.4 16 Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
31d1l7la_



not modelled 11.3 40 Fold:Galactose-binding domain-like
Superfamily:Galactose-binding domain-like
Family:PA-IL, galactose-binding lectin 1
32c2gwmA_



not modelled 10.9 13 PDB header:transferase, toxin
Chain: A: PDB Molecule:65 kda virulence protein;
PDBTitle: crystal structure of the salmonella spvb atr domain
33d1qs1a1



not modelled 10.9 13 Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
34d1ejab_



not modelled 10.4 31 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Leech antihemostatic proteins
Family:Huristasin-like
35d1hmja_



not modelled 10.2 8 Fold:RPB5-like RNA polymerase subunit
Superfamily:RPB5-like RNA polymerase subunit
Family:RPB5
36c2yuzA_



not modelled 10.0 11 PDB header:immune system
Chain: A: PDB Molecule:myosin-binding protein c, slow-type;
PDBTitle: solution structure of 4th immunoglobulin domain of slow2 type myosin-binding protein c
37c2bovB_



not modelled 9.9 24 PDB header:transferase
Chain: B: PDB Molecule:mono-adp-ribosyltransferase c3;
PDBTitle: molecular recognition of an adp-ribosylating clostridium2 botulinum c3 exoenzyme by rala gtpase
38d1dzfa2



not modelled 9.8 15 Fold:RPB5-like RNA polymerase subunit
Superfamily:RPB5-like RNA polymerase subunit
Family:RPB5
39d1eika_



not modelled 9.3 15 Fold:RPB5-like RNA polymerase subunit
Superfamily:RPB5-like RNA polymerase subunit
Family:RPB5
40d1wjja_



not modelled 9.2 13 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
41c3gabC_



not modelled 8.7 50 PDB header:hydrolase
Chain: C: PDB Molecule:dna mismatch repair protein mutl;
PDBTitle: c-terminal domain of bacillus subtilis mutl crystal form i
42c1z0zC_



not modelled 8.6 14 PDB header:transferase
Chain: C: PDB Molecule:probable inorganic polyphosphate/atp-nad kinase;
PDBTitle: crystal structure of a nad kinase from archaeoglobus2 fulgidus in complex with nad
43d1z0sa1



not modelled 8.6 14 Fold:NAD kinase/diacylglycerol kinase-like
Superfamily:NAD kinase/diacylglycerol kinase-like
Family:NAD kinase-like
44c2h6oA_



not modelled 8.6 26 PDB header:viral protein
Chain: A: PDB Molecule:major outer envelope glycoprotein gp350;
PDBTitle: epstein barr virus major envelope glycoprotein
45d1axha_



not modelled 8.5 27 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Spider toxins
46c3pt5A_



not modelled 8.4 20 PDB header:hydrolase
Chain: A: PDB Molecule:nans (yjhs), a 9-o-acetyl n-acetylneuraminic acid esterase;
PDBTitle: crystal structure of nans
47d1ojqa_



not modelled 8.3 27 Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
48c2cpcA_



not modelled 8.2 6 PDB header:immune system
Chain: A: PDB Molecule:kiaa0657 protein;
PDBTitle: solution structure of rsgi ruh-030, an ig like domain from2 human cdna
49c3bg4D_



not modelled 8.1 38 PDB header:hydrolase/hydrolase inhibitor
Chain: D: PDB Molecule:guamerin;
PDBTitle: the crystal structure of guamerin in complex with2 chymotrypsin and the development of an elastase-specific3 inhibitor
50d1tdha3



not modelled 7.9 43 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
51c1wc6B_



not modelled 7.9 28 PDB header:lyase
Chain: B: PDB Molecule:adenylate cyclase;
PDBTitle: soluble adenylyl cyclase cyac from s. platensis in complex2 with rp-atpalphas in presence of bicarbonate
52d2c8aa1



not modelled 7.8 24 Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
53c2kqdA_



not modelled 7.8 50 PDB header:lyase
Chain: A: PDB Molecule:aprataxin and pnk-like factor;
PDBTitle: first pbz domain of human aplf protein in complex with2 ribofuranosyladenosine
54d2yt9a1



not modelled 7.6 50 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
55d1uzva_



not modelled 7.6 15 Fold:Calcium-mediated lectin
Superfamily:Calcium-mediated lectin
Family:Calcium-mediated lectin
56d1xiwb_



not modelled 7.6 19 Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
57d1pcfa_



not modelled 7.6 31 Fold:ssDNA-binding transcriptional regulator domain
Superfamily:ssDNA-binding transcriptional regulator domain
Family:Transcriptional coactivator PC4 C-terminal domain
58c2eo1A_



not modelled 7.4 11 PDB header:contractile protein
Chain: A: PDB Molecule:cdna flj14124 fis, clone mamma1002498;
PDBTitle: solution structure of the ig domain of human obscn protein
59d1m0da_



not modelled 7.3 31 Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Endonuclease I (Holliday junction resolvase)
60c2pmzV_



not modelled 7.2 23 PDB header:translation, transferase
Chain: V: PDB Molecule:dna-directed rna polymerase subunit h;
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
61c3ncvB_



not modelled 7.0 33 PDB header:hydrolase
Chain: B: PDB Molecule:dna mismatch repair protein mutl;
PDBTitle: ngol
62c2zfnA_



not modelled 7.0 28 PDB header:transferase
Chain: A: PDB Molecule:regulator of ty1 transposition protein 109;
PDBTitle: self-acetylation mediated histone h3 lysine 56 acetylation by rtt109
63d1qs1a2



not modelled 6.9 13 Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
64c2jtdA_



not modelled 6.9 3 PDB header:cell adhesion
Chain: A: PDB Molecule:myomesin-1;
PDBTitle: skelemin immunoglobulin c2 like domain 4
65c3mr7B_



not modelled 6.7 24 PDB header:hydrolase
Chain: B: PDB Molecule:adenylate/guanylate cyclase/hydrolase, alpha/beta fold
PDBTitle: crystal structure of adenylate/guanylate cyclase/hydrolase from2 silicibacter pomeroyi
66d1usra_



not modelled 6.6 11 Fold:6-bladed beta-propeller
Superfamily:Sialidases
Family:Sialidases (neuraminidases)
67c3ehkC_



not modelled 6.5 12 PDB header:plant protein
Chain: C: PDB Molecule:prunin;
PDBTitle: crystal structure of pru du amandin, an allergenic protein2 from prunus dulcis
68c1rwuA_



not modelled 6.5 13 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical upf0250 protein ybed;
PDBTitle: solution structure of conserved protein ybed from e. coli
69d1rwua_



not modelled 6.5 13 Fold:Ferredoxin-like
Superfamily:YbeD/HP0495-like
Family:YbeD-like
70d1rgoa2



not modelled 6.5 57 Fold:CCCH zinc finger
Superfamily:CCCH zinc finger
Family:CCCH zinc finger
71d1wwbx_



not modelled 6.3 7 Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
72d1wd2a_



not modelled 6.2 30 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
73d2nqra2



not modelled 6.0 13 Fold:MoeA N-terminal region -like
Superfamily:MoeA N-terminal region -like
Family:MoeA N-terminal region -like
74d1jz8a5



not modelled 5.8 9 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
75d2isya2



not modelled 5.7 33 Fold:Iron-dependent repressor protein, dimerization domain
Superfamily:Iron-dependent repressor protein, dimerization domain
Family:Iron-dependent repressor protein, dimerization domain
76c2k50A_



not modelled 5.7 12 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:replication factor a related protein;
PDBTitle: solution nmr structure of the replication factor a related2 protein from methanobacterium thermoautotrophicum.3 northeast structural genomics target tr91a.
77d6paxa1



not modelled 5.5 18 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
78c2zkqi_



not modelled 5.5 11 PDB header:ribosomal protein/rna
Chain: I: PDB Molecule:
PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
79d2cu3a1



not modelled 5.4 18 Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:ThiS
80c2j58G_



not modelled 5.2 25 PDB header:membrane protein
Chain: G: PDB Molecule:outer membrane lipoprotein wza;
PDBTitle: the structure of wza
81d1s04a_



not modelled 5.2 16 Fold:PUA domain-like
Superfamily:PUA domain-like
Family:ProFAR isomerase associated domain
82c1ti2F_



not modelled 5.2 67 PDB header:oxidoreductase
Chain: F: PDB Molecule:pyrogallol hydroxytransferase small subunit;
PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici
83d1g3wa2



not modelled 5.1 29 Fold:Iron-dependent repressor protein, dimerization domain
Superfamily:Iron-dependent repressor protein, dimerization domain
Family:Iron-dependent repressor protein, dimerization domain

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0