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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3pt5A_ | PDB header: hydrolase | Chain: A: PDB Molecule: nans (yjhs), a 9-o-acetyl n-acetylneuraminic acid esterase; | PDBTitle: crystal structure of nans |
Added to library: Sat May 21 09:05:50 2011 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | I | I | S | P | D | Y | Y | Y | V | L | T | V | A | G | Q | S | N | A | M | A | Y | G | E | G | L | P | L | P | D | R | E | D | A | P | H | P | R | I | K | Q | L | A | R | F | A | H | T | H | P | G | G | P | S | C | H | F | N | D | I | I | P | L | T | H | C | P | H | D | V | Q |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | G | G | G | S | S | B | S | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | B | S | S | T | T | S | B | T | T | ![]() | ![]() | ![]() | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | D | M | Q | S | Y | H | H | P | L | A | T | N | H | Q | T | Q | Y | G | T | V | G | Q | A | L | H | I | A | R | K | L | L | P | F | I | P | D | N | A | G | I | L | I | V | P | C | C | R | G | G | S | A | F | T | A | G | S | E | G | T | Y | S | E | R | H | G | A | S | H | D | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | S | T | T | T | S | S | B | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | B | S | S | S | S | ![]() | ![]() | T | T | T | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | C | R | W | G | T | D | T | P | L | Y | Q | D | L | V | S | R | T | R | A | A | L | V | K | N | P | Q | N | K | F | L | G | V | C | W | M | Q | G | E | F | D | L | M | T | S | D | Y | A | S | H | P | Q | H | F | N | H | M | V | E | A | F | R | R | D | L | K | Q | Y | H | S | Q |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | G | G | G | G | S | T | T | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | G | G | G |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | L | N | D | A | P | W | F | C | G | D | T | T | W | Y | W | K | E | N | F | P | H | A | Y | E | A | I | Y | G | N | Y | Q | N | N | I | L | A | N | I | I | F | V | D | F | Q | Q | Q | G | A | R | G | L | T | N | A | P | D | E | D | P | D | D | L | S | T | G | Y | Y | G | S | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | G | G | G | T | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | S | T | T | S | B | S | S | G | G | G | S | B | G | G | G | T | B | G | G |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 |
Sequence | Y | R | S | P | E | N | W | T | T | A | L | R | S | S | H | F | S | S | A | A | R | R | G | I | I | S | D | R | F | V | E | A | I | L | Q | F | W | R | E | R | ||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | T | T | T | S | S | G | G | G | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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