Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	I	L	R	W	L	F	A	L	V	M	L	I	A	T	T	E	A	M	A	A	G	H	S	V	D	V	Y	Y	G	Y	N	G	D	S	R	N	I	A	T	F	N	L	K	I	M	M	P	S	A	V	Y	V	G	E	Y	K	S	S
Secondary structure
SS confidence
Disorder		?	?	?	?												?	?	?	?	?	?	?	?																																				?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		Q	W	L	M	T	G	E	I	L	Q	N	V	S	W	S	G	P	P	P	A	P	S	V	K	L	I	G	Y	H	Q	N	I	N	K	A	S	C	P	G	L	P	S	G	W	N	C	G	Y	Y	T	F	E	V	I	V	S	A	E	I	E
Secondary structure
SS confidence
Disorder		?		?	?					?	?					?												?	?	?	?	?	?		?	?	?																							?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		S	Y	F	S	C	P	W	L	V	I	M	N	D	S	E	A	S	P	G	G	V	T	Y	Q	G	P	D	S	H	D	T	I	C	P	S	V	S	V	Q	P	Y	D	V	S	W	N	E	N	Y	V	S	K	S	K	L	L	T	L	Q	S
Secondary structure
SS confidence
Disorder																?	?	?	?	?	?	?	?		?	?		?	?	?	?	?		?					?												?	?	?	?	?					?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		T	G	G	V	V	E	K	T	L	S	T	Y	L	M	K	D	G	K	L	C	D	S	T	Q	M	N	E	T	G	G	Y	C	R	W	V	A	Q	M	I	T	F	T	A	S	G	C	D	K	A	E	V	S	V	T	P	N	R	H	P	I
Secondary structure
SS confidence
Disorder		?	?																		?	?	?	?	?	?	?	?	?																					?					?			?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Sequence		T	D	K	Q	L	H	D	M	V	V	R	V	D	T	S	S	M	Q	P	I	D	S	T	C	R	F	Q	Y	I	L	N	E	L
Secondary structure
SS confidence
Disorder																?	?	?	?	?	?	?								?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1aqt chain A domain 2 Region: 40 - 87 Aligned: 43 Modelled: 48 Confidence: 37.3% Identity: 21% Fold: Epsilon subunit of F1F0-ATP synthase N-terminal domain Superfamily: Epsilon subunit of F1F0-ATP synthase N-terminal domain Family: Epsilon subunit of F1F0-ATP synthase N-terminal domain Phyre2 PDB 1s3r chain A Region: 161 - 211 Aligned: 45 Modelled: 51 Confidence: 35.3% Identity: 27% PDB header:toxin Chain: A: PDB Molecule:intermedilysin; PDBTitle: crystal structure of the human-specific toxin intermedilysin Phyre2 PDB 1pfo chain A Region: 161 - 211 Aligned: 45 Modelled: 51 Confidence: 33.1% Identity: 20% PDB header:toxin Chain: A: PDB Molecule:perfringolysin o; PDBTitle: perfringolysin o Phyre2 PDB 1pfo chain A Region: 161 - 211 Aligned: 45 Modelled: 51 Confidence: 33.1% Identity: 20% Fold: Perfringolysin Superfamily: Perfringolysin Family: Perfringolysin Phyre2 PDB 1fs0 chain E Region: 40 - 54 Aligned: 15 Modelled: 15 Confidence: 30.3% Identity: 13% PDB header:hydrolase Chain: E: PDB Molecule:atp synthase epsilon subunit; PDBTitle: complex of gamma/epsilon atp synthase from e.coli Phyre2 PDB 2rq7 chain A Region: 40 - 54 Aligned: 15 Modelled: 15 Confidence: 29.8% Identity: 7% PDB header:hydrolase Chain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: solution structure of the epsilon subunit chimera combining2 the n-terminal beta-sandwich domain from t. elongatus bp-13 f1 and the c-terminal alpha-helical domain from spinach4 chloroplast f1 Phyre2 PDB 2p02 chain A domain 3 Region: 201 - 234 Aligned: 33 Modelled: 34 Confidence: 29.2% Identity: 30% Fold: S-adenosylmethionine synthetase Superfamily: S-adenosylmethionine synthetase Family: S-adenosylmethionine synthetase Phyre2 PDB 1g94 chain A domain 1 Region: 176 - 233 Aligned: 45 Modelled: 58 Confidence: 28.2% Identity: 20% Fold: Glycosyl hydrolase domain Superfamily: Glycosyl hydrolase domain Family: alpha-Amylases, C-terminal beta-sheet domain Phyre2 PDB 1qm4 chain A domain 3 Region: 201 - 234 Aligned: 33 Modelled: 34 Confidence: 27.6% Identity: 30% Fold: S-adenosylmethionine synthetase Superfamily: S-adenosylmethionine synthetase Family: S-adenosylmethionine synthetase Phyre2 PDB 3dhp chain A domain 1 Region: 176 - 237 Aligned: 49 Modelled: 62 Confidence: 27.2% Identity: 24% Fold: Glycosyl hydrolase domain Superfamily: Glycosyl hydrolase domain Family: alpha-Amylases, C-terminal beta-sheet domain Phyre2 PDB 3b5w chain E Region: 192 - 217 Aligned: 26 Modelled: 26 Confidence: 25.2% Identity: 19% PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba Phyre2 PDB 2xu8 chain B Region: 73 - 127 Aligned: 51 Modelled: 55 Confidence: 22.5% Identity: 27% PDB header:structural genomics Chain: B: PDB Molecule:pa1645; PDBTitle: structure of pa1645 Phyre2 PDB 2e74 chain D domain 1 Region: 200 - 239 Aligned: 40 Modelled: 40 Confidence: 22.5% Identity: 23% Fold: ISP domain Superfamily: ISP domain Family: Rieske iron-sulfur protein (ISP) Phyre2 PDB 3so4 chain C Region: 201 - 234 Aligned: 33 Modelled: 34 Confidence: 21.0% Identity: 27% PDB header:transferase Chain: C: PDB Molecule:methionine-adenosyltransferase; PDBTitle: methionine-adenosyltransferase from entamoeba histolytica Phyre2 PDB 3hvn chain A Region: 161 - 211 Aligned: 45 Modelled: 51 Confidence: 20.2% Identity: 20% PDB header:toxin Chain: A: PDB Molecule:hemolysin; PDBTitle: crystal structure of cytotoxin protein suilysin from2 streptococcus suis Phyre2 PDB 2e5y chain A Region: 40 - 88 Aligned: 44 Modelled: 49 Confidence: 19.9% Identity: 18% PDB header:hydrolase Chain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: epsilon subunit and atp complex of f1f0-atp synthase from2 the thermophilic bacillus ps3 Phyre2 PDB 1v58 chain A domain 2 Region: 192 - 209 Aligned: 18 Modelled: 18 Confidence: 19.8% Identity: 44% Fold: Cystatin-like Superfamily: DsbC/DsbG N-terminal domain-like Family: DsbC/DsbG N-terminal domain-like Phyre2 PDB 2obv chain A Region: 201 - 234 Aligned: 33 Modelled: 34 Confidence: 19.7% Identity: 30% PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine synthetase isoform type-1; PDBTitle: crystal structure of the human s-adenosylmethionine synthetase 1 in2 complex with the product Phyre2 PDB 1rg9 chain D Region: 201 - 234 Aligned: 32 Modelled: 34 Confidence: 19.2% Identity: 34% PDB header:transferase Chain: D: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: s-adenosylmethionine synthetase complexed with sam and ppnp Phyre2 PDB 3iml chain B Region: 201 - 234 Aligned: 33 Modelled: 34 Confidence: 18.9% Identity: 24% PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from burkholderia2 pseudomallei Phyre2 1 d1aqta2 2 c1s3rA_ 3 c1pfoA_ 4 d1pfoa_ 5 c1fs0E_ 6 c2rq7A_ 7 d2p02a3 8 d1g94a1 9 d1qm4a3 10 d3dhpa1 11 c3b5wE_ 12 c2xu8B_ 13 d2e74d1 14 c3so4C_ 15 c3hvnA_ 16 c2e5yA_ 17 d1v58a2 18 c2obvA_ 19 c1rg9D_ 20 c3imlB_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1aqta2 37.3 21 Fold:Epsilon subunit of F1F0-ATP synthase N-terminal domain Superfamily:Epsilon subunit of F1F0-ATP synthase N-terminal domain Family:Epsilon subunit of F1F0-ATP synthase N-terminal domain 2 c1s3rA_ 35.3 27 PDB header:toxin Chain: A: PDB Molecule:intermedilysin; PDBTitle: crystal structure of the human-specific toxin intermedilysin 3 c1pfoA_ 33.1 20 PDB header:toxin Chain: A: PDB Molecule:perfringolysin o; PDBTitle: perfringolysin o 4 d1pfoa_ 33.1 20 Fold:Perfringolysin Superfamily:Perfringolysin Family:Perfringolysin 5 c1fs0E_ 30.3 13 PDB header:hydrolase Chain: E: PDB Molecule:atp synthase epsilon subunit; PDBTitle: complex of gamma/epsilon atp synthase from e.coli 6 c2rq7A_ 29.8 7 PDB header:hydrolase Chain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: solution structure of the epsilon subunit chimera combining2 the n-terminal beta-sandwich domain from t. elongatus bp-13 f1 and the c-terminal alpha-helical domain from spinach4 chloroplast f1 7 d2p02a3 29.2 30 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 8 d1g94a1 28.2 20 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 9 d1qm4a3 27.6 30 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 10 d3dhpa1 27.2 24 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 11 c3b5wE_ 25.2 19 PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba 12 c2xu8B_ 22.5 27 PDB header:structural genomics Chain: B: PDB Molecule:pa1645; PDBTitle: structure of pa1645 13 d2e74d1 22.5 23 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 14 c3so4C_ 21.0 27 PDB header:transferase Chain: C: PDB Molecule:methionine-adenosyltransferase; PDBTitle: methionine-adenosyltransferase from entamoeba histolytica 15 c3hvnA_ 20.2 20 PDB header:toxin Chain: A: PDB Molecule:hemolysin; PDBTitle: crystal structure of cytotoxin protein suilysin from2 streptococcus suis 16 c2e5yA_ 19.9 18 PDB header:hydrolase Chain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: epsilon subunit and atp complex of f1f0-atp synthase from2 the thermophilic bacillus ps3 17 d1v58a2 19.8 44 Fold:Cystatin-like Superfamily:DsbC/DsbG N-terminal domain-like Family:DsbC/DsbG N-terminal domain-like 18 c2obvA_ 19.7 30 PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine synthetase isoform type-1; PDBTitle: crystal structure of the human s-adenosylmethionine synthetase 1 in2 complex with the product 19 c1rg9D_ 19.2 34 PDB header:transferase Chain: D: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: s-adenosylmethionine synthetase complexed with sam and ppnp 20 c3imlB_ 18.9 24 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from burkholderia2 pseudomallei 21 c3rv2B_ not modelled 17.6 27 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from2 mycobacterium marinum 22 c2wanA_ not modelled 16.2 25 PDB header:hydrolase Chain: A: PDB Molecule:pullulanase; PDBTitle: pullulanase from bacillus acidopullulyticus 23 c2l92A_ not modelled 13.6 50 PDB header:dna binding protein Chain: A: PDB Molecule:histone family protein nucleoid-structuring protein h-ns; PDBTitle: solution structure of the c-terminal domain of h-ns like protein bv3f 24 c1h8eH_ not modelled 13.3 14 PDB header:hydrolase Chain: H: PDB Molecule:bovine mitochondrial f1-atpase; PDBTitle: (adp.alf4)2(adp.so4) bovine f1-atpase2 (all three catalytic sites occupied) 25 c3ebeA_ not modelled 11.8 24 PDB header:replication Chain: A: PDB Molecule:protein mcm10 homolog; PDBTitle: crystal structure of xenopus laevis replication initiation factor2 mcm10 internal domain 26 d2j07a1 not modelled 11.8 23 Fold:Cryptochrome/photolyase FAD-binding domain Superfamily:Cryptochrome/photolyase FAD-binding domain Family:Cryptochrome/photolyase FAD-binding domain 27 d1ig4a_ not modelled 10.6 50 Fold:DNA-binding domain Superfamily:DNA-binding domain Family:Methyl-CpG-binding domain, MBD 28 d1e6vb2 not modelled 10.5 18 Fold:Ferredoxin-like Superfamily:Methyl-coenzyme M reductase subunits Family:Methyl-coenzyme M reductase alpha and beta chain N-terminal domain 29 c2qe7H_ not modelled 10.3 27 PDB header:hydrolase Chain: H: PDB Molecule:atp synthase subunit epsilon; PDBTitle: crystal structure of the f1-atpase from the thermoalkaliphilic2 bacterium bacillus sp. ta2.a1 30 d1ik0a_ not modelled 9.9 35 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Short-chain cytokines 31 d1hbnb2 not modelled 9.4 45 Fold:Ferredoxin-like Superfamily:Methyl-coenzyme M reductase subunits Family:Methyl-coenzyme M reductase alpha and beta chain N-terminal domain 32 d1mxaa3 not modelled 9.2 30 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 33 d1jaea1 not modelled 9.1 26 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 34 c1dvaY_ not modelled 8.9 40 PDB header:hydrolase/hydrolase inhibitor Chain: Y: PDB Molecule:peptide e-76; PDBTitle: crystal structure of the complex between the peptide exosite inhibitor2 e-76 and coagulation factor viia 35 c1dvaX_ not modelled 8.9 40 PDB header:hydrolase/hydrolase inhibitor Chain: X: PDB Molecule:peptide e-76; PDBTitle: crystal structure of the complex between the peptide exosite inhibitor2 e-76 and coagulation factor viia 36 d1r44a_ not modelled 8.8 20 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:VanX-like 37 d2j2ja1 not modelled 8.6 33 Fold:Virus attachment protein globular domain Superfamily:Virus attachment protein globular domain Family:Adenovirus fiber protein "knob" domain 38 c2e76D_ not modelled 8.6 25 PDB header:photosynthesis Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 39 c3ideD_ not modelled 8.5 21 PDB header:virus like particle Chain: D: PDB Molecule:capsid protein vp2; PDBTitle: structure of ipnv subviral particle 40 c2df7H_ not modelled 8.5 43 PDB header:virus like particle Chain: H: PDB Molecule:structural polyprotein vp2; PDBTitle: crystal structure of infectious bursal disease virus vp2 subviral2 particle 41 c2wstE_ not modelled 8.4 50 PDB header:viral protein Chain: E: PDB Molecule:putative fiber protein; PDBTitle: head domain of porcine adenovirus type 4 nadc-1 isolate2 fibre 42 d2df7a1 not modelled 8.3 43 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Birnaviridae-like VP 43 c2rkcA_ not modelled 8.2 20 PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin; PDBTitle: crystal structure of the measles virus hemagglutinin 44 c3m05A_ not modelled 8.0 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pepe_1480; PDBTitle: the crystal structure of a functionally unknown protein2 pepe_1480 from pediococcus pentosaceus atcc 25745 45 c2ky8A_ not modelled 7.7 60 PDB header:transcription/dna Chain: A: PDB Molecule:methyl-cpg-binding domain protein 2; PDBTitle: solution structure and dynamic analysis of chicken mbd2 methyl binding2 domain bound to a target methylated dna sequence 46 d1v1ha1 not modelled 7.6 25 Fold:Triple beta-spiral Superfamily:Fibre shaft of virus attachment proteins Family:Adenovirus 47 c2yxhB_ not modelled 7.4 75 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mazg-related protein; PDBTitle: crystal structure of mazg-related protein from thermotoga maritima 48 d1ua7a1 not modelled 7.4 17 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 49 d1wi9a_ not modelled 7.4 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PCI domain (PINT motif) 50 c3oqcB_ not modelled 7.3 25 PDB header:hydrolase Chain: B: PDB Molecule:ufm1-specific protease 2; PDBTitle: ubiquitin-fold modifier 1 specific protease, ufsp2 51 c1z8rA_ not modelled 7.3 34 PDB header:hydrolase Chain: A: PDB Molecule:coxsackievirus b4 polyprotein; PDBTitle: 2a cysteine proteinase from human coxsackievirus b4 (strain2 jvb / benschoten / new york / 51) 52 c2z84A_ not modelled 7.2 67 PDB header:hydrolase Chain: A: PDB Molecule:ufm1-specific protease 1; PDBTitle: insights from crystal and solution structures of mouse ufsp1 53 c3crcB_ not modelled 7.0 25 PDB header:hydrolase Chain: B: PDB Molecule:protein mazg; PDBTitle: crystal structure of escherichia coli mazg, the regulator2 of nutritional stress response 54 d2j4wd1 not modelled 6.7 80 Fold:Apical membrane antigen 1 Superfamily:Apical membrane antigen 1 Family:Apical membrane antigen 1 55 c2j4wD_ not modelled 6.7 80 PDB header:immune system Chain: D: PDB Molecule:apical membrane antigen 1; PDBTitle: structure of a plasmodium vivax apical membrane antigen 1-2 fab f8.12.19 complex 56 d2ysca1 not modelled 6.0 71 Fold:WW domain-like Superfamily:WW domain Family:WW domain 57 c2i5pO_ not modelled 5.9 21 PDB header:oxidoreductase Chain: O: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase 1; PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase isoform 1 from k. marxianus 58 c2l1qA_ not modelled 5.9 42 PDB header:antimicrobial protein Chain: A: PDB Molecule:liver-expressed antimicrobial peptide 2; PDBTitle: solution structure of human liver expressed antimicrobial peptide 2 59 c3obhA_ not modelled 5.9 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: x-ray crystal structure of protein sp_0782 (7-79) from streptococcus2 pneumoniae. northeast structural genomics consortium target spr104 60 c2pbdV_ not modelled 5.9 75 PDB header:structural protein Chain: V: PDB Molecule:vasodilator-stimulated phosphoprotein; PDBTitle: ternary complex of profilin-actin with the poly-pro-gab2 domain of vasp* 61 c2yyyB_ not modelled 5.9 23 PDB header:oxidoreductase Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase 62 c2j5lA_ not modelled 5.7 100 PDB header:immune system Chain: A: PDB Molecule:apical membrane antigen 1; PDBTitle: structure of a plasmodium falciparum apical membrane2 antigen 1-fab f8.12.19 complex 63 d2j5la1 not modelled 5.7 100 Fold:Apical membrane antigen 1 Superfamily:Apical membrane antigen 1 Family:Apical membrane antigen 1 64 d1obfo2 not modelled 5.7 21 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:GAPDH-like 65 d1rm4a2 not modelled 5.2 27 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:GAPDH-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0