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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2df7H_

Fold library idPDB HeaderMoleculeTitle
c2df7H_PDB header: virus like particleChain: H: PDB Molecule: structural polyprotein vp2;PDBTitle: crystal structure of infectious bursal disease virus vp22 subviral particle


Added to library: Tue Mar 16 14:00:27 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYK
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Known secondary structure (DSSP)

GGG





SS



B

TTS

TT
SSS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPLNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIG
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Known secondary structure (DSSP)
SS
GGGT






SS
GGG
S

STTGGGGS


GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence NVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQSGGVT
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Known secondary structure (DSSP) TTT



S
SS









SSTT





SS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ITLFSANIDAITSLSIGGELVFHTSVHGLALDATIYLIGFDGTTVITRAVASDNGLTTGIDNLMPFNLVI
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Known secondary structure (DSSP) SS

SSSSTTS


TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PTNEITQPITSIKLEIVTSKSGGQAGDQMSWSASGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVA
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Known secondary structure (DSSP)
GGG

S
TT

TT
TTTTSTTSS

S

TT
 .........360.........370.........380.........390.........400.........410...
Sequence GVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERERLGIKTVWPTREYTDFREYFMEV
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Known secondary structure (DSSP)
TT


B




TTTT

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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