Email l.a.kelley@imperial.ac.uk Description P77188 Date Thu Jan 5 12:26:12 GMT 2012 Unique Job ID 92de6bd8a5aafb8a

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1z9sA_ 100.0 16 PDB header:chaperone/immune system Chain: A: PDB Molecule:chaperone protein caf1m; PDBTitle: crystal structure of the native chaperone:subunit:subunit2 caf1m:caf1:caf1 complex 2 c2co7B_ 100.0 11 PDB header:fibril protein Chain: B: PDB Molecule:putative fimbriae assembly chaperone; PDBTitle: salmonella enterica safa pilin in complex with the safb2 chaperone (type ii) 3 c3q48B_ 100.0 13 PDB header:chaperone Chain: B: PDB Molecule:chaperone cupb2; PDBTitle: crystal structure of pseudomonas aeruginosa cupb2 chaperone 4 c1qunA_ 100.0 14 PDB header:chaperone/structural protein Chain: A: PDB Molecule:papd-like chaperone fimc; PDBTitle: x-ray structure of the fimc-fimh chaperone adhesin complex2 from uropathogenic e.coli 5 c1l4iA_ 100.0 12 PDB header:chaperone Chain: A: PDB Molecule:sfae protein; PDBTitle: crystal structure of the periplasmic chaperone sfae 6 c1qpxA_ 100.0 11 PDB header:chaperone Chain: A: PDB Molecule:papd chaperone; PDBTitle: crystal structures of self-capping papd chaperone homodimers 7 c3f6iB_ 99.9 14 PDB header:chaperone Chain: B: PDB Molecule:chaperone protein faee; PDBTitle: structure of the semet labeled f4 fibrial chaperone faee 8 d1p5va1 99.9 20 Fold:Immunoglobulin-like beta-sandwich Superfamily:PapD-like Family:Pilus chaperone 9 d2co7b1 99.9 12 Fold:Immunoglobulin-like beta-sandwich Superfamily:PapD-like Family:Pilus chaperone 10 d2j2za1 99.9 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:PapD-like Family:Pilus chaperone 11 d3bwuc1 99.9 13 Fold:Immunoglobulin-like beta-sandwich Superfamily:PapD-like Family:Pilus chaperone 12 d1l4ia1 99.9 10 Fold:Immunoglobulin-like beta-sandwich Superfamily:PapD-like Family:Pilus chaperone 13 d1m1sa_ 97.9 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:PapD-like Family:MSP-like 14 d1rowa_ 97.7 12 Fold:Immunoglobulin-like beta-sandwich Superfamily:PapD-like Family:MSP-like 15 c2qsvA_ 97.6 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein of unknown function from porphyromonas2 gingivalis w83 16 d1grwa_ 97.2 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:PapD-like Family:MSP-like 17 d3bwuc2 96.7 14 Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain 18 c1z9oB_ 96.6 13 PDB header:protein binding/lipid binding protein Chain: B: PDB Molecule:vesicle-associated membrane protein-associated protein a; PDBTitle: 1.9 angstrom crystal structure of the rat vap-a msp homology domain in2 complex with the rat orp1 ffat motif 19 d1mspa_ 95.9 15 Fold:Immunoglobulin-like beta-sandwich Superfamily:PapD-like Family:MSP-like 20 c2e6jA_ 95.5 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hydin protein; PDBTitle: solution structure of the c-terminal papd-like domain from2 human hydin protein 21 c2ys4A_ not modelled 95.3 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hydrocephalus-inducing protein homolog; PDBTitle: solution structure of the n-terminal papd-like domain of2 hydin protein from human 22 d1wica_ not modelled 94.3 16 Fold:Immunoglobulin-like beta-sandwich Superfamily:PapD-like Family:MSP-like 23 d1w8oa1 not modelled 94.2 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 24 d2j2za2 not modelled 94.0 12 Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain 25 c3o0lB_ not modelled 94.0 9 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pfam duf1425 family member (shew_1734) from2 shewanella sp. pv-4 at 1.81 a resolution 26 d1p5va2 not modelled 94.0 10 Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain 27 d2co7b2 not modelled 93.4 8 Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain 28 c3qbtH_ not modelled 91.7 17 PDB header:protein transport/hydrolase Chain: H: PDB Molecule:inositol polyphosphate 5-phosphatase ocrl-1; PDBTitle: crystal structure of ocrl1 540-678 in complex with rab8a:gppnhp 29 d1l4ia2 not modelled 88.4 14 Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain 30 c3qisA_ not modelled 88.3 17 PDB header:hydrolase/protein binding Chain: A: PDB Molecule:inositol polyphosphate 5-phosphatase ocrl-1; PDBTitle: recognition of the f&h motif by the lowe syndrome protein ocrl 31 c2jwyA_ not modelled 84.7 17 PDB header:lipoprotein Chain: A: PDB Molecule:uncharacterized lipoprotein yaji; PDBTitle: solution nmr structure of uncharacterized lipoprotein yaji from2 escherichia coli. northeast structural genomics target er540 32 c3ac0B_ not modelled 80.8 14 PDB header:hydrolase Chain: B: PDB Molecule:beta-glucosidase i; PDBTitle: crystal structure of beta-glucosidase from kluyveromyces marxianus in2 complex with glucose 33 d2vzsa2 not modelled 75.7 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:beta-Galactosidase/glucuronidase domain Family:beta-Galactosidase/glucuronidase domain 34 c2x41A_ not modelled 71.2 13 PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase; PDBTitle: structure of beta-glucosidase 3b from thermotoga neapolitana2 in complex with glucose 35 c1l9mB_ not modelled 65.9 13 PDB header:transferase Chain: B: PDB Molecule:protein-glutamine glutamyltransferase e3; PDBTitle: three-dimensional structure of the human transglutaminase 32 enzyme: binding of calcium ions change structure for3 activation 36 c3isyA_ not modelled 59.2 10 PDB header:protein binding Chain: A: PDB Molecule:intracellular proteinase inhibitor; PDBTitle: crystal structure of an intracellular proteinase inhibitor (ipi,2 bsu11130) from bacillus subtilis at 2.61 a resolution 37 c2r39A_ not modelled 51.3 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:fixg-related protein; PDBTitle: crystal structure of fixg-related protein from vibrio parahaemolyticus 38 c3cfuA_ not modelled 47.2 16 PDB header:lipoprotein Chain: A: PDB Molecule:uncharacterized lipoprotein yjha; PDBTitle: crystal structure of the yjha protein from bacillus2 subtilis. northeast structural genomics consortium target3 sr562 39 d1exha_ not modelled 47.1 14 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Carbohydrate-binding domain Family:Cellulose-binding domain family II 40 d1yq2a1 not modelled 45.7 7 Fold:Immunoglobulin-like beta-sandwich Superfamily:beta-Galactosidase/glucuronidase domain Family:beta-Galactosidase/glucuronidase domain 41 d1ufga_ not modelled 45.7 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:Lamin A/C globular tail domain Family:Lamin A/C globular tail domain 42 c2lllA_ not modelled 44.8 9 PDB header:structural protein Chain: A: PDB Molecule:lamin-b2; PDBTitle: solution nmr structure of c-terminal globular domain of human lamin-2 b2, northeast structural genomics consortium target hr8546a 43 d4ubpb_ not modelled 44.1 11 Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit 44 d1e9ya1 not modelled 43.6 15 Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit 45 c3qgaD_ not modelled 38.0 11 PDB header:hydrolase Chain: D: PDB Molecule:fusion of urease beta and gamma subunits; PDBTitle: 3.0 a model of iron containing urease urea2b2 from helicobacter2 mustelae 46 c3jt0B_ not modelled 37.8 13 PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of the c-terminal fragment (426-558)2 lamin-b1 from homo sapiens, northeast structural genomics3 consortium target hr5546a 47 c2kl6A_ not modelled 37.1 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of the cardb domain of pf1109 from2 pyrococcus furiosus. northeast structural genomics3 consortium target pfr193a 48 d1ejxb_ not modelled 32.1 17 Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit 49 d1ifra_ not modelled 31.9 12 Fold:Immunoglobulin-like beta-sandwich Superfamily:Lamin A/C globular tail domain Family:Lamin A/C globular tail domain 50 c1yewI_ not modelled 26.9 17 PDB header:oxidoreductase, membrane protein Chain: I: PDB Molecule:particulate methane monooxygenase, b subunit; PDBTitle: crystal structure of particulate methane monooxygenase 51 d1hmja_ not modelled 26.7 26 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 52 c3rgbA_ not modelled 26.0 17 PDB header:oxidoreductase Chain: A: PDB Molecule:methane monooxygenase subunit b2; PDBTitle: crystal structure of particulate methane monooxygenase from2 methylococcus capsulatus (bath) 53 d2uubs1 not modelled 23.7 29 Fold:Ribosomal protein S19 Superfamily:Ribosomal protein S19 Family:Ribosomal protein S19 54 d2gy9s1 not modelled 23.3 29 Fold:Ribosomal protein S19 Superfamily:Ribosomal protein S19 Family:Ribosomal protein S19 55 d1ivta_ not modelled 20.2 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:Lamin A/C globular tail domain Family:Lamin A/C globular tail domain 56 d1vjja2 not modelled 19.4 12 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 57 c3bbnS_ not modelled 18.4 23 PDB header:ribosome Chain: S: PDB Molecule:ribosomal protein s19; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 58 d1kyaa2 not modelled 18.3 11 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 59 c1s1hS_ not modelled 17.8 29 PDB header:ribosome Chain: S: PDB Molecule:40s ribosomal protein s15; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. 60 d2cj3a1 not modelled 16.0 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 61 c3rfrI_ not modelled 15.6 15 PDB header:oxidoreductase Chain: I: PDB Molecule:pmob; PDBTitle: crystal structure of particulate methane monooxygenase (pmmo) from2 methylocystis sp. strain m 62 c2zkqs_ not modelled 15.4 29 PDB header:ribosomal protein/rna Chain: S: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 63 c3ndyG_ not modelled 15.4 17 PDB header:hydrolase Chain: G: PDB Molecule:endoglucanase d; PDBTitle: the structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans 64 c2xzmS_ not modelled 14.5 29 PDB header:ribosome Chain: S: PDB Molecule:rps15e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 65 c1e9zA_ not modelled 14.3 25 PDB header:hydrolase Chain: A: PDB Molecule:urease subunit alpha; PDBTitle: crystal structure of helicobacter pylori urease 66 c2je8B_ not modelled 12.9 10 PDB header:hydrolase Chain: B: PDB Molecule:beta-mannosidase; PDBTitle: structure of a beta-mannosidase from bacteroides2 thetaiotaomicron 67 d1plaa_ not modelled 12.7 25 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 68 d1eika_ not modelled 12.6 24 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 69 d1bxua_ not modelled 12.1 11 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 70 d2q5ba1 not modelled 12.0 11 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 71 d1pcsa_ not modelled 11.4 14 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 72 c3mdjB_ not modelled 11.3 10 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: er aminopeptidase, erap1, bound to the zinc aminopeptidase inhibitor,2 bestatin 73 d1gyca2 not modelled 11.1 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 74 d1bqka_ not modelled 10.9 22 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 75 d9pcya_ not modelled 10.8 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 76 c2f1eA_ not modelled 10.0 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein apag; PDBTitle: solution structure of apag protein 77 d1dzfa2 not modelled 9.7 25 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 78 d1ag6a_ not modelled 9.5 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 79 d1g0da2 not modelled 9.4 9 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 80 d1hfua2 not modelled 9.3 5 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 81 d1plca_ not modelled 9.1 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 82 c2kutA_ not modelled 9.0 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of gmr58a from geobacter metallireducens.2 northeast structural genomics consortium target gmr58a 83 d1aoza2 not modelled 8.8 10 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 84 d1hc1a3 not modelled 8.7 19 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arthropod hemocyanin, C-terminal domain 85 d1v7wa2 not modelled 8.6 16 Fold:Supersandwich Superfamily:Galactose mutarotase-like Family:Glycosyltransferase family 36 N-terminal domain 86 d7pcya_ not modelled 8.3 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 87 c2pmzV_ not modelled 8.1 25 PDB header:translation, transferase Chain: V: PDB Molecule:dna-directed rna polymerase subunit h; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 88 c1pzdA_ not modelled 7.6 15 PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:coatomer gamma subunit; PDBTitle: structural identification of a conserved appendage domain2 in the carboxyl-terminus of the copi gamma-subunit. 89 d3pmga4 not modelled 7.6 11 Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain 90 d2jxma1 not modelled 7.4 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 91 c3qnfA_ not modelled 7.4 12 PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: crystal structure of the open state of human endoplasmic reticulum2 aminopeptidase 1 erap1 92 d1ex0a2 not modelled 7.2 10 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 93 d1v10a2 not modelled 6.9 10 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 94 d1pmya_ not modelled 6.6 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 95 d1adwa_ not modelled 6.6 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 96 d1bypa_ not modelled 6.5 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 97 d2plta_ not modelled 6.5 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 98 d1nc7a_ not modelled 5.9 21 Fold:Hypothetical protein TM1070 Superfamily:Hypothetical protein TM1070 Family:Hypothetical protein TM1070 99 c3izbR_ not modelled 5.6 31 PDB header:ribosome Chain: R: PDB Molecule:40s ribosomal protein rps15 (s19p); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome