Fold library entry viewer: c3mdjB_

Added to library: Sat Apr 2 09:01:30 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	F	P	W	N	K	I	R	L	P	E	Y	V	I	P	V	H	Y	D	L	L	I	H	A	N	L	T	T	L	T	F	W	G	T	T	K	V	E	I	T	A	S	Q	P	T	S	T	I	I	L	H	S	H	H	L	Q	I	S	R	A	T	L	R	K	G	A	G	E	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				S	S			S	S														T	T	T	T													S	S			S							S	S											S	S		S	S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	E	E	P	L	Q	V	L	E	H	P	R	Q	E	Q	I	A	L	L	A	P	E	P	L	L	V	G	L	P	Y	T	V	V	I	H	Y	A	G	N	L	S	E	T	F	H	G	F	Y	K	S	T	Y	R	T	K	E	G	E	L	R	I	L	A	S	T	Q	F	E	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										T	T	T	T							S	S				T	T														B	S	S	S	S										T	T												T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	A	R	M	A	F	P	C	F	D	E	P	A	F	K	A	S	F	S	I	K	I	R	R	E	P	R	H	L	A	I	S	N	M	P	L	V	K	S	V	T	V	A	E	G	L	I	E	D	H	F	D	V	T	V	K	M	S	T	Y	L	V	A	F	I	I	S	D	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T	S		B			S	T	T	S		B										T	T						S	S										T	T											S	B		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	V	S	K	I	T	K	S	G	V	K	V	S	V	Y	A	V	P	D	K	I	N	Q	A	D	Y	A	L	D	A	A	V	T	L	L	E	F	Y	E	D	Y	F	S	I	P	Y	P	L	P	K	Q	D	L	A	A	I	P	D	F	Q	S	G	A	M	E	N	W	G	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S									G	G	G	G	G	G																				T	S			S	S	S								T	T			S						T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	Y	R	E	S	A	L	L	F	D	A	E	K	S	S	A	S	S	K	L	D	I	T	M	T	V	A	H	E	L	A	H	Q	W	F	G	N	L	V	T	M	E	W	W	N	D	L	W	L	N	E	G	F	A	K	F	M	E	F	V	S	V	S	V	T	H	P	E	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	T				T	T		S																		T	T	T	B	T	T	T				S	S	G	G	G																					G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	G	D	Y	F	F	G	K	C	F	D	A	M	E	V	D	A	L	N	S	S	D	D	V	S	Y	D	K	G	A	C	I	L	N	M	L	R	E	Y	L	S	A	D	A	F	K	S	G	I	V	Q	Y	L	Q	K	H	S	Y	K	N	T	K	N	E	D	L	W	D	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																T	S	S																					S																	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	S	I	V	D	V	K	T	M	M	N	T	W	T	L	Q	R	G	F	P	L	I	T	I	T	V	R	G	R	N	V	H	M	K	Q	E	H	Y	M	K	A	P	D	T	G	Y	L	W	H	V	P	L	T	F	I	T	S	K	S	D	M	V	H	R	F	L	L	K	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T													S	S	S	S										T	T																												S	S		S	S								S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	D	V	L	I	L	P	E	E	V	E	W	I	K	F	N	V	G	M	N	G	Y	Y	I	V	H	Y	E	D	D	G	W	D	S	L	T	G	L	L	K	G	T	H	T	A	V	S	S	N	D	R	A	S	L	I	N	N	A	F	Q	L	V	S	I	G	K	L	S	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S			S					S	G	G	G		S	S	S					T	T	T													G	G	G	S																	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	A	L	D	L	S	L	Y	L	K	H	E	T	E	I	M	P	V	F	Q	G	L	N	E	L	I	P	M	Y	K	L	M	E	K	R	D	M	N	E	V	E	T	Q	F	K	A	F	L	I	R	L	L	R	D	L	I	D	K	Q	T	W	T	D	E	G	S	V	S	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G	G	G																						T	T	S	S																									S	S	S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	M	L	R	S	E	L	L	L	L	A	C	V	H	N	Y	Q	P	C	V	Q	R	A	E	G	Y	F	R	K	W	K	E	S	N	G	N	L	S	L	P	V	D	V	T	L	A	V	F	A	V	G	A	Q	S	T	E	G	W	D	F	L	Y	S	K	Y	Q	F	S	L	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T																	T	T	T	S		S															T	T	S													S		T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	E	K	S	Q	I	E	F	A	L	C	R	T	Q	N	K	E	K	L	Q	W	L	L	D	E	S	F	K	G	D	K	I	K	T	Q	E	F	P	Q	I	L	T	L	I	G	R	N	P	V	G	Y	P	L	A	W	Q	F	L	R	K	N	W	N	K	L	V	Q	K	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T		S												T	T	S	T	T	T			T	T	T										S	S	T	T	T											T					T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.
Sequence	S	I	A	H	M	V	M	G	T	T	N	Q	F	S	T	R	T	R	L	E	E	V	K	C	V	Q	Q	T	I	E	T	I	E	E	N	I	G	W	M	D	K	N	F	D	K	I	R	V	W	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S									T	T				S									T																									T

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PDB structure

FASTA sequence

Hidden Markov model

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