Emaill.a.kelley@imperial.ac.uk
DescriptionP57998
DateThu Jan 5 12:06:30 GMT 2012
Unique Job ID9184d1895204d3d7

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1d1cxqa_



98.0 15 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
2d1hyva_



98.0 14 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
3d1exqa_



97.6 11 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
4d1asua_



97.4 18 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
5c1c0mA_



97.3 18 PDB header:transferase
Chain: A: PDB Molecule:protein (integrase);
PDBTitle: crystal structure of rsv two-domain integrase
6c1ex4A_



97.1 14 PDB header:viral protein
Chain: A: PDB Molecule:integrase;
PDBTitle: hiv-1 integrase catalytic core and c-terminal domain
7c3nf9A_



96.9 17 PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:integrase;
PDBTitle: structural basis for a new mechanism of inhibition of hiv integrase2 identified by fragment screening and structure based design
8d1c0ma2



96.9 16 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
9c3kksB_



96.8 21 PDB header:dna binding protein
Chain: B: PDB Molecule:integrase;
PDBTitle: crystal structure of catalytic core domain of biv integrase in crystal2 form ii
10c3f9kV_



96.6 13 PDB header:viral protein, recombination
Chain: V: PDB Molecule:integrase;
PDBTitle: two domain fragment of hiv-2 integrase in complex with ledgf ibd
11c1k6yB_



96.5 16 PDB header:transferase
Chain: B: PDB Molecule:integrase;
PDBTitle: crystal structure of a two-domain fragment of hiv-1 integrase
12d1c6va_



96.4 14 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
13c3dlrA_



93.1 11 PDB header:transferase
Chain: A: PDB Molecule:integrase;
PDBTitle: crystal structure of the catalytic core domain from pfv2 integrase
14c3hpgC_



92.7 14 PDB header:transferase
Chain: C: PDB Molecule:integrase;
PDBTitle: visna virus integrase (residues 1-219) in complex with ledgf2 ibd: examples of open integrase dimer-dimer interfaces
15c3l2tB_



83.4 9 PDB header:recombination/dna
Chain: B: PDB Molecule:integrase;
PDBTitle: crystal structure of the prototype foamy virus (pfv) intasome in2 complex with magnesium and mk0518 (raltegravir)
16d1bcoa2



49.1 4 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:mu transposase, core domain
17c1bcoA_



27.8 4 PDB header:transposase
Chain: A: PDB Molecule:bacteriophage mu transposase;
PDBTitle: bacteriophage mu transposase core domain
18c1xb4C_



27.0 38 PDB header:unknown function
Chain: C: PDB Molecule:hypothetical 23.6 kda protein in yuh1-ura8
PDBTitle: crystal structure of subunit vps25 of the endosomal2 trafficking complex escrt-ii
19d1xb4a1



24.1 41 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Vacuolar sorting protein domain
20c3he5D_



23.2 30 PDB header:de novo protein
Chain: D: PDB Molecule:synzip2;
PDBTitle: heterospecific coiled-coil pair synzip2:synzip1
21c3cuqD_



not modelled 21.1 47 PDB header:protein transport
Chain: D: PDB Molecule:vacuolar protein-sorting-associated protein 25;
PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
22c2zmeD_



not modelled 20.6 47 PDB header:protein transport
Chain: D: PDB Molecule:vacuolar protein-sorting-associated protein 25;
PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
23d1baia_



not modelled 15.8 33 Fold:Acid proteases
Superfamily:Acid proteases
Family:Retroviral protease (retropepsin)
24c2k8fB_



not modelled 14.7 29 PDB header:transferase/transcription
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structural basis for the regulation of p53 function by p300
25c3a2aC_



not modelled 11.6 69 PDB header:transport protein
Chain: C: PDB Molecule:voltage-gated hydrogen channel 1;
PDBTitle: the structure of the carboxyl-terminal domain of the human voltage-2 gated proton channel hv1
26c3e0jG_



not modelled 11.5 26 PDB header:transferase
Chain: G: PDB Molecule:dna polymerase subunit delta-2;
PDBTitle: x-ray structure of the complex of regulatory subunits of2 human dna polymerase delta
27c2zkrl_



not modelled 10.8 16 PDB header:ribosomal protein/rna
Chain: L: PDB Molecule:rna expansion segment es20;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
28c3bv6D_



not modelled 10.5 11 PDB header:hydrolase
Chain: D: PDB Molecule:metal-dependent hydrolase;
PDBTitle: crystal structure of uncharacterized metallo protein from vibrio2 cholerae with beta-lactamase like fold
29d1sgua_



not modelled 9.8 20 Fold:Acid proteases
Superfamily:Acid proteases
Family:Retroviral protease (retropepsin)
30d1v6fa_



not modelled 9.3 16 Fold:Gelsolin-like
Superfamily:Actin depolymerizing proteins
Family:Cofilin-like
31d1az5a_



not modelled 9.3 20 Fold:Acid proteases
Superfamily:Acid proteases
Family:Retroviral protease (retropepsin)
32d1nvpd2



not modelled 9.2 38 Fold:Transcription factor IIA (TFIIA), beta-barrel domain
Superfamily:Transcription factor IIA (TFIIA), beta-barrel domain
Family:Transcription factor IIA (TFIIA), beta-barrel domain
33d1gkra1



not modelled 9.1 25 Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:Hydantoinase (dihydropyrimidinase)
34d2rspa_



not modelled 9.1 29 Fold:Acid proteases
Superfamily:Acid proteases
Family:Retroviral protease (retropepsin)
35d1lyva_



not modelled 8.3 33 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Higher-molecular-weight phosphotyrosine protein phosphatases
36d1hvca_



not modelled 7.4 30 Fold:Acid proteases
Superfamily:Acid proteases
Family:Retroviral protease (retropepsin)
37d2jdid2



not modelled 7.0 16 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like
Superfamily:N-terminal domain of alpha and beta subunits of F1 ATP synthase
Family:N-terminal domain of alpha and beta subunits of F1 ATP synthase
38d2gu3a2



not modelled 7.0 16 Fold:Cystatin-like
Superfamily:Cystatin/monellin
Family:PepSY-like
39d1mabb2



not modelled 6.8 16 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like
Superfamily:N-terminal domain of alpha and beta subunits of F1 ATP synthase
Family:N-terminal domain of alpha and beta subunits of F1 ATP synthase
40d1nh2d2



not modelled 6.5 25 Fold:Transcription factor IIA (TFIIA), beta-barrel domain
Superfamily:Transcription factor IIA (TFIIA), beta-barrel domain
Family:Transcription factor IIA (TFIIA), beta-barrel domain
41c2gu3A_



not modelled 6.4 15 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ypmb protein;
PDBTitle: ypmb protein from bacillus subtilis
42d2bg1a1



not modelled 6.4 18 Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
43d1y7ea2



not modelled 6.2 12 Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
44c3lk3T_



not modelled 6.1 38 PDB header:protein binding
Chain: T: PDB Molecule:leucine-rich repeat-containing protein 16a;
PDBTitle: crystal structure of capz bound to the cpi and csi uncapping2 motifs from carmil
45d3c7bb2



not modelled 5.9 36 Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:DsrA/DsrB N-terminal-domain-like
46d2c5wb1



not modelled 5.8 18 Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
47c2j8oA_



not modelled 5.8 11 PDB header:structural protein
Chain: A: PDB Molecule:titin;
PDBTitle: structure of the immunoglobulin tandem repeat of titin a168-2 a169
48c3gebC_



not modelled 5.6 18 PDB header:hydrolase
Chain: C: PDB Molecule:eyes absent homolog 2;
PDBTitle: crystal structure of edeya2
49c1tiiC_



not modelled 5.5 44 PDB header:enterotoxin
Chain: C: PDB Molecule:heat labile enterotoxin type iib;
PDBTitle: escherichia coli heat labile enterotoxin type iib
50d1nfga1



not modelled 5.5 30 Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:Hydantoinase (dihydropyrimidinase)
51d2gycj1



not modelled 5.4 27 Fold:Ribosomal proteins L15p and L18e
Superfamily:Ribosomal proteins L15p and L18e
Family:Ribosomal proteins L15p and L18e
52c3c7bE_



not modelled 5.3 40 PDB header:oxidoreductase
Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit beta;
PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus
53d1flga_



not modelled 5.2 28 Fold:8-bladed beta-propeller
Superfamily:Quinoprotein alcohol dehydrogenase-like
Family:Quinoprotein alcohol dehydrogenase-like
54d4fiva_



not modelled 5.2 15 Fold:Acid proteases
Superfamily:Acid proteases
Family:Retroviral protease (retropepsin)
55c3t38B_



not modelled 5.1 15 PDB header:oxidoreductase
Chain: B: PDB Molecule:arsenate reductase;
PDBTitle: corynebacterium glutamicum thioredoxin-dependent arsenate reductase2 cg_arsc1'