Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	A	T	R	I	E	F	H	K	H	G	G	P	E	V	L	Q	A	V	E	F	T	P	A	D	P	A	E	N	E	I	Q	V	E	N	K	A	I	G	I	N	F	I	D	T	Y	I	R	S	G	L	Y	P	P	P	S	L	P	S	G
Secondary structure
SS confidence
Disorder		?	?																																																					?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		L	G	T	E	A	A	G	I	V	S	K	V	G	S	G	V	K	H	I	K	A	G	D	R	V	V	Y	A	Q	S	A	L	G	A	Y	S	S	V	H	N	I	I	A	D	K	A	A	I	L	P	A	A	I	S	F	E	Q	A	A	A
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		S	F	L	K	G	L	T	V	Y	Y	L	L	R	K	T	Y	E	I	K	P	D	E	Q	F	L	F	H	A	A	A	G	G	V	G	L	I	A	C	Q	W	A	K	A	L	G	A	K	L	I	G	T	V	G	T	A	Q	K	A	Q	S
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		A	L	K	A	G	A	W	Q	V	I	N	Y	R	E	E	D	L	V	E	R	L	K	E	I	T	G	G	K	K	V	R	V	V	Y	D	S	V	G	R	D	T	W	E	R	S	L	D	C	L	Q	R	R	G	L	M	V	S	F	G	N
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		S	S	G	A	V	T	G	V	N	L	G	I	L	N	Q	K	G	S	L	Y	V	T	R	P	S	L	Q	G	Y	I	T	T	R	E	E	L	T	E	A	S	N	E	L	F	S	L	I	A	S	G	V	I	K	V	D	V	A	E	Q	Q
Secondary structure
SS confidence
Disorder				?	?			?	?						?	?	?	?									?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Sequence		K	Y	P	L	K	D	A	Q	R	A	H	E	I	L	E	S	R	A	T	Q	G	S	S	L	L	I	P
Secondary structure
SS confidence
Disorder																	?		?			?					?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1qor chain A Region: 2 - 327 Aligned: 326 Modelled: 326 Confidence: 100.0% Identity: 100% PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of escherichia coli quinone2 oxidoreductase complexed with nadph Phyre2 PDB 3jyn chain A Region: 1 - 327 Aligned: 325 Modelled: 327 Confidence: 100.0% Identity: 58% PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structures of pseudomonas syringae pv. tomato dc30002 quinone oxidoreductase complexed with nadph Phyre2 PDB 3krt chain C Region: 2 - 326 Aligned: 314 Modelled: 315 Confidence: 100.0% Identity: 26% PDB header:oxidoreductase Chain: C: PDB Molecule:crotonyl coa reductase; PDBTitle: crystal structure of putative crotonyl coa reductase from streptomyces2 coelicolor a3(2) Phyre2 PDB 1wly chain A Region: 2 - 327 Aligned: 317 Modelled: 326 Confidence: 100.0% Identity: 41% PDB header:oxidoreductase Chain: A: PDB Molecule:2-haloacrylate reductase; PDBTitle: crystal structure of 2-haloacrylate reductase Phyre2 PDB 3gms chain A Region: 2 - 327 Aligned: 324 Modelled: 326 Confidence: 100.0% Identity: 23% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nadph:quinone reductase; PDBTitle: crystal structure of putative nadph:quinone reductase from2 bacillus thuringiensis Phyre2 PDB 2j8z chain A Region: 2 - 326 Aligned: 322 Modelled: 325 Confidence: 100.0% Identity: 28% PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of human p53 inducible oxidoreductase (2 tp53i3,pig3) Phyre2 PDB 3uog chain B Region: 2 - 326 Aligned: 312 Modelled: 316 Confidence: 100.0% Identity: 23% PDB header:oxidoreductase Chain: B: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of putative alcohol dehydrogenase from sinorhizobium2 meliloti 1021 Phyre2 PDB 1ma0 chain B Region: 1 - 326 Aligned: 318 Modelled: 326 Confidence: 100.0% Identity: 22% PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione-dependent formaldehyde dehydrogenase; PDBTitle: ternary complex of human glutathione-dependent formaldehyde2 dehydrogenase with nad+ and dodecanoic acid Phyre2 PDB 2vcy chain A Region: 2 - 326 Aligned: 323 Modelled: 325 Confidence: 100.0% Identity: 24% PDB header:oxidoreductase Chain: A: PDB Molecule:trans-2-enoyl-coa reductase; PDBTitle: crystal structure of 2-enoyl thioester reductase of human2 fas ii Phyre2 PDB 3cos chain D Region: 1 - 325 Aligned: 318 Modelled: 325 Confidence: 100.0% Identity: 20% PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 4; PDBTitle: crystal structure of human class ii alcohol dehydrogenase (adh4) in2 complex with nad and zn Phyre2 PDB 1cdo chain B Region: 2 - 326 Aligned: 316 Modelled: 325 Confidence: 100.0% Identity: 17% PDB header:oxidoreductase (ch-oh(d)-nad(a)) Chain: B: PDB Molecule:alcohol dehydrogenase; PDBTitle: alcohol dehydrogenase (e.c.1.1.1.1) (ee isozyme) complexed with2 nicotinamide adenine dinucleotide (nad), and zinc Phyre2 PDB 4a10 chain A Region: 2 - 327 Aligned: 304 Modelled: 302 Confidence: 100.0% Identity: 27% PDB header:oxidoreductase Chain: A: PDB Molecule:octenoyl-coa reductase/carboxylase; PDBTitle: apo-structure of 2-octenoyl-coa carboxylase reductase cinf from2 streptomyces sp. Phyre2 PDB 1n9g chain F Region: 1 - 326 Aligned: 326 Modelled: 326 Confidence: 100.0% Identity: 21% PDB header:hydrolase Chain: F: PDB Molecule:2,4-dienoyl-coa reductase; PDBTitle: mitochondrial 2-enoyl thioester reductase etr1p/etr2p2 heterodimer from candida tropicalis Phyre2 PDB 2eih chain A Region: 2 - 326 Aligned: 314 Modelled: 325 Confidence: 100.0% Identity: 30% PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of nad-dependent alcohol dehydrogenase Phyre2 PDB 1yb5 chain A Region: 1 - 326 Aligned: 319 Modelled: 323 Confidence: 100.0% Identity: 29% PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of human zeta-crystallin with bound nadp Phyre2 PDB 1hf3 chain A Region: 2 - 326 Aligned: 316 Modelled: 320 Confidence: 100.0% Identity: 21% PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase e chain; PDBTitle: atomic x-ray structure of liver alcohol dehydrogenase2 containing cadmium and a hydroxide adduct to nadh Phyre2 PDB 1r37 chain B Region: 2 - 327 Aligned: 313 Modelled: 325 Confidence: 100.0% Identity: 22% PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent alcohol dehydrogenase; PDBTitle: alcohol dehydrogenase from sulfolobus solfataricus2 complexed with nad(h) and 2-ethoxyethanol Phyre2 PDB 3fbg chain A Region: 2 - 326 Aligned: 323 Modelled: 325 Confidence: 100.0% Identity: 19% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative arginate lyase; PDBTitle: crystal structure of a putative arginate lyase from staphylococcus2 haemolyticus Phyre2 PDB 2ejv chain A Region: 2 - 327 Aligned: 315 Modelled: 326 Confidence: 100.0% Identity: 19% PDB header:oxidoreductase Chain: A: PDB Molecule:l-threonine 3-dehydrogenase; PDBTitle: crystal structure of threonine 3-dehydrogenase complexed with nad+ Phyre2 PDB 3b70 chain A Region: 1 - 326 Aligned: 321 Modelled: 326 Confidence: 100.0% Identity: 19% PDB header:oxidoreductase Chain: A: PDB Molecule:enoyl reductase; PDBTitle: crystal structure of aspergillus terreus trans-acting lovastatin2 polyketide enoyl reductase (lovc) with bound nadp Phyre2 1 c1qorA_ 2 c3jynA_ 3 c3krtC_ 4 c1wlyA_ 5 c3gmsA_ 6 c2j8zA_ 7 c3uogB_ 8 c1ma0B_ 9 c2vcyA_ 10 c3cosD_ 11 c1cdoB_ 12 c4a10A_ 13 c1n9gF_ 14 c2eihA_ 15 c1yb5A_ 16 c1hf3A_ 17 c1r37B_ 18 c3fbgA_ 19 c2ejvA_ 20 c3b70A_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1qorA_ 100.0 100 PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of escherichia coli quinone2 oxidoreductase complexed with nadph 2 c3jynA_ 100.0 58 PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structures of pseudomonas syringae pv. tomato dc30002 quinone oxidoreductase complexed with nadph 3 c3krtC_ 100.0 26 PDB header:oxidoreductase Chain: C: PDB Molecule:crotonyl coa reductase; PDBTitle: crystal structure of putative crotonyl coa reductase from streptomyces2 coelicolor a3(2) 4 c1wlyA_ 100.0 41 PDB header:oxidoreductase Chain: A: PDB Molecule:2-haloacrylate reductase; PDBTitle: crystal structure of 2-haloacrylate reductase 5 c3gmsA_ 100.0 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nadph:quinone reductase; PDBTitle: crystal structure of putative nadph:quinone reductase from2 bacillus thuringiensis 6 c2j8zA_ 100.0 28 PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of human p53 inducible oxidoreductase (2 tp53i3,pig3) 7 c3uogB_ 100.0 23 PDB header:oxidoreductase Chain: B: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of putative alcohol dehydrogenase from sinorhizobium2 meliloti 1021 8 c1ma0B_ 100.0 22 PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione-dependent formaldehyde dehydrogenase; PDBTitle: ternary complex of human glutathione-dependent formaldehyde2 dehydrogenase with nad+ and dodecanoic acid 9 c2vcyA_ 100.0 24 PDB header:oxidoreductase Chain: A: PDB Molecule:trans-2-enoyl-coa reductase; PDBTitle: crystal structure of 2-enoyl thioester reductase of human2 fas ii 10 c3cosD_ 100.0 20 PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 4; PDBTitle: crystal structure of human class ii alcohol dehydrogenase (adh4) in2 complex with nad and zn 11 c1cdoB_ 100.0 17 PDB header:oxidoreductase (ch-oh(d)-nad(a)) Chain: B: PDB Molecule:alcohol dehydrogenase; PDBTitle: alcohol dehydrogenase (e.c.1.1.1.1) (ee isozyme) complexed with2 nicotinamide adenine dinucleotide (nad), and zinc 12 c4a10A_ 100.0 27 PDB header:oxidoreductase Chain: A: PDB Molecule:octenoyl-coa reductase/carboxylase; PDBTitle: apo-structure of 2-octenoyl-coa carboxylase reductase cinf from2 streptomyces sp. 13 c1n9gF_ 100.0 21 PDB header:hydrolase Chain: F: PDB Molecule:2,4-dienoyl-coa reductase; PDBTitle: mitochondrial 2-enoyl thioester reductase etr1p/etr2p2 heterodimer from candida tropicalis 14 c2eihA_ 100.0 30 PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of nad-dependent alcohol dehydrogenase 15 c1yb5A_ 100.0 29 PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of human zeta-crystallin with bound nadp 16 c1hf3A_ 100.0 21 PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase e chain; PDBTitle: atomic x-ray structure of liver alcohol dehydrogenase2 containing cadmium and a hydroxide adduct to nadh 17 c1r37B_ 100.0 22 PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent alcohol dehydrogenase; PDBTitle: alcohol dehydrogenase from sulfolobus solfataricus2 complexed with nad(h) and 2-ethoxyethanol 18 c3fbgA_ 100.0 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative arginate lyase; PDBTitle: crystal structure of a putative arginate lyase from staphylococcus2 haemolyticus 19 c2ejvA_ 100.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:l-threonine 3-dehydrogenase; PDBTitle: crystal structure of threonine 3-dehydrogenase complexed with nad+ 20 c3b70A_ 100.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:enoyl reductase; PDBTitle: crystal structure of aspergillus terreus trans-acting lovastatin2 polyketide enoyl reductase (lovc) with bound nadp 21 c1kolA_ not modelled 100.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:formaldehyde dehydrogenase; PDBTitle: crystal structure of formaldehyde dehydrogenase 22 c1f8fA_ not modelled 100.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:benzyl alcohol dehydrogenase; PDBTitle: crystal structure of benzyl alcohol dehydrogenase from acinetobacter2 calcoaceticus 23 c3pi7A_ not modelled 100.0 17 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh oxidoreductase; PDBTitle: crystal structure of a putative nadph:quinone reductase (mll3093) from2 mesorhizobium loti at 1.71 a resolution 24 c2xaaC_ not modelled 100.0 20 PDB header:oxidoreductase Chain: C: PDB Molecule:secondary alcohol dehydrogenase; PDBTitle: alcohol dehydrogenase adh-'a' from rhodococcus ruber dsm2 44541 at ph 8.5 in complex with nad and butane-1,4-diol 25 c1vj0B_ not modelled 100.0 21 PDB header:oxidoreductase Chain: B: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: crystal structure of alcohol dehydrogenase (tm0436) from thermotoga2 maritima at 2.00 a resolution 26 c2dphA_ not modelled 100.0 17 PDB header:oxidoreductase Chain: A: PDB Molecule:formaldehyde dismutase; PDBTitle: crystal structure of formaldehyde dismutase 27 c1pl6A_ not modelled 100.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:sorbitol dehydrogenase; PDBTitle: human sdh/nadh/inhibitor complex 28 c1h2bA_ not modelled 100.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of the alcohol dehydrogenase from the2 hyperthermophilic archaeon aeropyrum pernix at 1.65a3 resolution 29 c1p0fA_ not modelled 100.0 21 PDB header:oxidoreductase Chain: A: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: crystal structure of the binary complex: nadp(h)-dependent vertebrate2 alcohol dehydrogenase (adh8) with the cofactor nadp 30 c1y9eB_ not modelled 100.0 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein yhfp; PDBTitle: crystal structure of bacillus subtilis protein yhfp with2 nad bound 31 c2dfvB_ not modelled 100.0 24 PDB header:oxidoreductase Chain: B: PDB Molecule:probable l-threonine 3-dehydrogenase; PDBTitle: hyperthermophilic threonine dehydrogenase from pyrococcus horikoshii 32 c1kevB_ not modelled 100.0 16 PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: structure of nadp-dependent alcohol dehydrogenase 33 c1piwA_ not modelled 100.0 21 PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical zinc-type alcohol dehydrogenase- PDBTitle: apo and holo structures of an nadp(h)-dependent cinnamyl2 alcohol dehydrogenase from saccharomyces cerevisiae 34 c2c0cB_ not modelled 100.0 25 PDB header:oxidoreductase Chain: B: PDB Molecule:zinc binding alcohol dehydrogenase, domain PDBTitle: structure of the mgc45594 gene product 35 c3gazA_ not modelled 100.0 22 PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase superfamily protein; PDBTitle: crystal structure of an alcohol dehydrogenase superfamily protein from2 novosphingobium aromaticivorans 36 c2cf5A_ not modelled 100.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:cinnamyl alcohol dehydrogenase; PDBTitle: crystal structures of the arabidopsis cinnamyl alcohol2 dehydrogenases, atcad5 37 c2ouiB_ not modelled 100.0 18 PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: d275p mutant of alcohol dehydrogenase from protozoa entamoeba2 histolytica 38 c1yqxB_ not modelled 100.0 17 PDB header:oxidoreductase Chain: B: PDB Molecule:sinapyl alcohol dehydrogenase; PDBTitle: sinapyl alcohol dehydrogenase at 2.5 angstrom resolution 39 c2hcyD_ not modelled 100.0 23 PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 1; PDBTitle: yeast alcohol dehydrogenase i, saccharomyces cerevisiae fermentative2 enzyme 40 c3ip1C_ not modelled 100.0 18 PDB header:oxidoreductase Chain: C: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: structure of putative alcohol dehydrogenase (tm_042) from thermotoga2 maritima 41 c1e3jA_ not modelled 100.0 21 PDB header:oxidoreductase Chain: A: PDB Molecule:nadp(h)-dependent ketose reductase; PDBTitle: ketose reductase (sorbitol dehydrogenase) from silverleaf2 whitefly 42 c3tqhA_ not modelled 100.0 25 PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: structure of the quinone oxidoreductase from coxiella burnetii 43 c1xa0B_ not modelled 100.0 18 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nadph dependent oxidoreductases; PDBTitle: crystal structure of mcsg target apc35536 from bacillus2 stearothermophilus 44 c1rjwA_ not modelled 100.0 25 PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of nad(+)-dependent alcohol dehydrogenase2 from bacillus stearothermophilus strain lld-r 45 c3iupB_ not modelled 100.0 17 PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadph:quinone oxidoreductase; PDBTitle: crystal structure of putative nadph:quinone oxidoreductase2 (yp_296108.1) from ralstonia eutropha jmp134 at 1.70 a resolution 46 c2w4qA_ not modelled 100.0 13 PDB header:oxidoreductase Chain: A: PDB Molecule:prostaglandin reductase 2; PDBTitle: crystal structure of human zinc-binding alcohol2 dehydrogenase 1 (zadh1) in ternary complex with nadp and3 18beta-glycyrrhetinic acid 47 c1lluD_ not modelled 100.0 23 PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase; PDBTitle: the ternary complex of pseudomonas aeruginosa alcohol2 dehydrogenase with its coenzyme and weak substrate 48 c2cdaA_ not modelled 100.0 15 PDB header:oxidoreductase Chain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: sulfolobus solfataricus glucose dehydrogenase 1 in complex2 with nadp 49 c1o89A_ not modelled 100.0 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:yhdh; PDBTitle: crystal structure of e. coli k-12 yhdh 50 c1zsvB_ not modelled 100.0 16 PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent leukotriene b4 12- PDBTitle: crystal structure of human nadp-dependent leukotriene b4 12-2 hydroxydehydrogenase 51 c2j3iB_ not modelled 100.0 19 PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent oxidoreductase p1; PDBTitle: crystal structure of arabidopsis thaliana double bond2 reductase (at5g16970)-binary complex 52 c3gohA_ not modelled 100.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: crystal structure of alcohol dehydrogenase superfamily protein2 (np_718042.1) from shewanella oneidensis at 1.55 a resolution 53 c1uufA_ not modelled 100.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:zinc-type alcohol dehydrogenase-like protein PDBTitle: crystal structure of a zinc-type alcohol dehydrogenase-like2 protein yahk 54 c3m6iA_ not modelled 100.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:l-arabinitol 4-dehydrogenase; PDBTitle: l-arabinitol 4-dehydrogenase 55 c2vwpA_ not modelled 100.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: haloferax mediterranei glucose dehydrogenase in complex2 with nadph and zn. 56 c2vn8B_ not modelled 100.0 20 PDB header:receptor inhibitor Chain: B: PDB Molecule:reticulon-4-interacting protein 1; PDBTitle: crystal structure of human reticulon 4 interacting protein2 1 in complex with nadph 57 c1iz0A_ not modelled 100.0 24 PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structures of the quinone oxidoreductase from2 thermus thermophilus hb8 and its complex with nadph 58 c2h6eA_ not modelled 100.0 17 PDB header:oxidoreductase Chain: A: PDB Molecule:d-arabinose 1-dehydrogenase; PDBTitle: crystal structure of the d-arabinose dehydrogenase from sulfolobus2 solfataricus 59 d1uufa1 not modelled 99.9 16 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 60 d1p0fa1 not modelled 99.9 18 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 61 d1gu7a1 not modelled 99.9 21 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 62 d1yb5a1 not modelled 99.9 24 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 63 d1piwa1 not modelled 99.9 17 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 64 d1cdoa1 not modelled 99.9 22 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 65 d1xa0a1 not modelled 99.9 17 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 66 d1pl8a1 not modelled 99.9 25 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 67 d1qora1 not modelled 99.9 80 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 68 d1kola1 not modelled 99.9 13 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 69 d1jvba1 not modelled 99.9 19 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 70 d1jqba1 not modelled 99.9 23 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 71 d2fzwa1 not modelled 99.9 25 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 72 d1f8fa1 not modelled 99.9 20 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 73 d1d1ta1 not modelled 99.9 22 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 74 d1u3wa1 not modelled 99.9 25 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 75 d1u3ta1 not modelled 99.9 28 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 76 d1ykfa1 not modelled 99.9 22 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 77 d1vj0a1 not modelled 99.9 27 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 78 d1e3ia1 not modelled 99.9 24 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 79 d1u3ua1 not modelled 99.8 29 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 80 d1llua1 not modelled 99.8 27 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 81 d2jhfa1 not modelled 99.8 25 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 82 d1o89a1 not modelled 99.8 13 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 83 d1tt7a1 not modelled 99.8 17 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 84 d1rjwa1 not modelled 99.8 31 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 85 c2vz8B_ not modelled 99.8 19 PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase 86 d1h2ba1 not modelled 99.8 22 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 87 d1iz0a1 not modelled 99.8 22 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 88 d1e3ja1 not modelled 99.7 22 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 89 d1v3va1 not modelled 99.6 11 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 90 d1qora2 not modelled 99.4 100 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 91 d1pqwa_ not modelled 99.3 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 92 d1f8fa2 not modelled 99.0 18 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 93 d1e3ia2 not modelled 98.9 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 94 d1v3va2 not modelled 98.9 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 95 d1gu7a2 not modelled 98.9 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 96 d1yb5a2 not modelled 98.9 29 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 97 d1h2ba2 not modelled 98.9 16 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 98 d1cdoa2 not modelled 98.8 10 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 99 d1tt7a2 not modelled 98.8 18 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 100 d1o89a2 not modelled 98.8 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 101 d1ykfa2 not modelled 98.8 12 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 102 d1vj1a1 not modelled 98.8 17 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 103 d2jhfa2 not modelled 98.7 16 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 104 d1rjwa2 not modelled 98.7 28 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 105 d1p0fa2 not modelled 98.7 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 106 d2fzwa2 not modelled 98.7 16 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 107 d1vj0a2 not modelled 98.7 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 108 d1piwa2 not modelled 98.7 22 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 109 d1llua2 not modelled 98.7 25 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 110 d1vj1a2 not modelled 98.7 16 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 111 d1jqba2 not modelled 98.6 12 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 112 d1xa0a2 not modelled 98.6 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 113 d1jvba2 not modelled 98.5 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 114 d1uufa2 not modelled 98.5 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 115 d1pl8a2 not modelled 98.5 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 116 d1u3wa2 not modelled 98.4 18 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 117 d1d1ta2 not modelled 98.3 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 118 d1kola2 not modelled 98.2 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 119 d1iz0a2 not modelled 98.2 26 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 120 d1e3ja2 not modelled 98.1 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0