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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2vz8B_

Fold library idPDB HeaderMoleculeTitle
c2vz8B_PDB header: transferaseChain: B: PDB Molecule: fatty acid synthase;PDBTitle: crystal structure of mammalian fatty acid synthase


Added to library: Tue Mar 16 12:08:14 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSK
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Known secondary structure (DSSP)


BTTBSSTT



SSSS
TTGGG

S

S
SS


TTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence QANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMM
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Known secondary structure (DSSP) TS
GGGT

GGGGTT
S



TT

SSS

GGGGGGTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDG
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Known secondary structure (DSSP) T

S


TTSTTSS
S



TT
B
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TCRSFDAEGTGYCRAEAVVAVLLTKKSLARRVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPA
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Known secondary structure (DSSP) S

SSBTT


B
BB
GGG
S

S



TT
SSS

TTSGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence GPDPESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEH
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Known secondary structure (DSSP) SS
TTS







TT
S
SSS


S
B
GGGTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPNSRPAPPPAQHAAL
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Known secondary structure (DSSP) T


SS

SB
TTSSSSSSSS


S


S

TTT







SSTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence PRLLQASGRTLEAVQTLLEQGLRHSRDLAFVGMLNEIAAVSPVAMPFRGYAVLGGEAGSQEVQQVPGSKR
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Known secondary structure (DSSP)
SSTTT



TTT

SSTT




S

 .........500.........510.........520.........530.........540.........550.........560
Sequence PVWFICSGMGAQWQGMGLSLMRLDRFRDSILRSDQALKPLGLRVSDLLLSTDEAVLDDIVSSFVSLTSIQ
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Known secondary structure (DSSP)


TT


TTTTSSTTSSGGGT




TTSSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence IALIDLLTSLGLQPDGIIGHSLGEVACGYADGCLTQEEAVLSSYWRGYCIKEANVLPGAMAAVGLSWEEC
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Known secondary structure (DSSP) TT


S
TTTTSS
S



SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence KQRCPPGIVPACHNSKDTVTISGPQAAMSEFLQQLKREDVFVKEVRTGGIAFHSYFMESIAPTLLRQLRK
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Known secondary structure (DSSP) TT

TT

TTSTTSTTTTTT



SSS

TTSGGGTTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence VILDPKPRSKRWLSTSIPEAQWQGSLARTFSAEYSVNNLVSPVLFQEALQHVPAHAVVVEIAPHALLQAV
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Known secondary structure (DSSP) S
S

B

TT
SSS
GGGTTSSSTTB

S
B
TTS
SS

SSS
TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence LKRSLESSCTIIPLMKKDHRDNLEFFLSNVGRLHLAGVSVNPNGLFPPVEFPAPRGTPLISPHIKWDHSQ
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Known secondary structure (DSSP) S
TTS
S

TT
S
T



GGGTS



SS

TT


SGGG





S
 .........850.........860.........870.........880.........890.........900.........910
Sequence AWDVPSAADFPSGSSCSSVAVYKFDVSPESPDHYLVDHCIDGRVLFPGTGYLWLTWKTLARALSQNLEET
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Known secondary structure (DSSP)





TTTS
SS



S
STTSGGGGGGG
TT

TT

GGG
 .........920.........930.........940.........950.........960.........970.........980
Sequence PVVFEDVTLHQATILPKTGTVSLEVRLLEASHAFEVSDSNGSLIASGKVYQWESPDPKLFDTRAAVDPAD
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Known secondary structure (DSSP)

S


SSSTTTTTT


SS

GGGG



SS



 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence STAEFRLSQGDVYKDLRLRGYDYGPFFQLVLESDLEGNRGRLQWNDSWVSFLDAMLHMSILAPGQLGLYL
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Known secondary structure (DSSP) SSS

T



GGG

TTSS

S
T
TT

S
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence PTRFTSIRIDPVTHRQKLYTLQDTTQAADVVVDRNLNTVVAGGALFLGAHSSVAPRRPQEHLKPILEKFC
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Known secondary structure (DSSP)
B
S




SSS
TTTTTTS







TT




 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence FTPHVESGCLAGNTALQEELQLCLLSGLLDAPALKACVDTALENMASPKMKVVEVLAGDGQLYSRIPALL
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Known secondary structure (DSSP) S



TTTTT


SS


SSTTTTSSSSS
SSS
TTTTT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence NTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPADLLVCNCAPAVAVGNMAATLKEGGF
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Known secondary structure (DSSP) TTSSS
SSSSGGGTTTTTTTTTT

SSS








STTTT
TTS
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LLLHTLLSQDQWESLFAGASLHLVALKRSFYGSVLFLCRQQTPQDSPVFLSVEDTSFRWVDSLKDILADA
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Known secondary structure (DSSP)



TSSTTTT
TTS











TT
TSSTTS

 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence SSRPVWLMAVGCSTSGVVGMVNCLRKEPGGHRIRCVLVSNLSSTSPAPEMHPSSSELQKVLQGDLVMNVY
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Known secondary structure (DSSP) S


SS
TT

TTSGGGGGG




STT




SSST

S
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence RDGAWGAFRHFPLEQDRPEKQTEHAFVNVLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDV
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Known secondary structure (DSSP) TT







S

SSSS
TTS

GGGG


TTSTTT
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence MLATGKLSPDSIPGKWLTRDCMLGMEFSGRDASGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAA
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Known secondary structure (DSSP) TSS
GGG

S

S
SS




TT


SS

SBS

GGG

TTS
T
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence SVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLD
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Known secondary structure (DSSP) TTTTT


TT

SSSTT
S

TT

 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence ETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFL
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Known secondary structure (DSSP) STTSSSSTTTT




TT


TT



TTGGG
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence KNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQV
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Known secondary structure (DSSP) GT


TTS

TTT
S



SSTTT

SSS
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence REEEQGPAPRGLPPIALTGLSKTFCPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQA
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Known secondary structure (DSSP) S



SS














TT
STTSTT


SS


S
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence RQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKY
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Known secondary structure (DSSP) TT



SSSS









STT

TTTTTT
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence SGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAMERICEKRRHDGLPGLAVQWGAIGDV
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Known secondary structure (DSSP)
TT



TT
TT
TTS




B
TT
 .........1970.........1980.........1990.........2000....
Sequence GVVLENDTVIGGTLPQRIASCLEVLDLFLSQPHPVLSSFVLAEK
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Known secondary structure (DSSP) STTT




TTS
B
T
S
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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