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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1yb5A_

Fold library idPDB HeaderMoleculeTitle
c1yb5A_PDB header: oxidoreductaseChain: A: PDB Molecule: quinone oxidoreductase;PDBTitle: crystal structure of human zeta-crystallin with bound nadp


Added to library: Tue Mar 16 12:20:48 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAG
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Known secondary structure (DSSP)
SS
SSGGG




TT

T
SS



SSB


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAC
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Known secondary structure (DSSP)
TT
TT

TT
S

SS
SSBSGGG

TTS
TTTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGE
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Known secondary structure (DSSP)

TT
T
SSTT
SSTT
STTSTT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAA
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Known secondary structure (DSSP) T
S




S




TTTT


GGG

 .........290.........300.........310.........320....
Sequence LQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL
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Known secondary structure (DSSP) T




GGGSS

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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