Email l.a.kelley@imperial.ac.uk Description P39358 Date Thu Jan 5 11:59:48 GMT 2012 Unique Job ID 8d313280ba75998e

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2gp4A_ 100.0 28 PDB header:lyase Chain: A: PDB Molecule:6-phosphogluconate dehydratase; PDBTitle: structure of [fes]cluster-free apo form of 6-phosphogluconate2 dehydratase from shewanella oneidensis 2 d2gp4a2 100.0 28 Fold:IlvD/EDD N-terminal domain-like Superfamily:IlvD/EDD N-terminal domain-like Family:lvD/EDD N-terminal domain-like 3 d2gp4a1 100.0 26 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:IlvD/EDD C-terminal domain-like 4 c2pcnA_ 76.7 13 PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine:2-demethylmenaquinone PDBTitle: crystal structure of s-adenosylmethionine: 2-dimethylmenaquinone2 methyltransferase (gk_1813) from geobacillus kaustophilus hta426 5 d1zyma2 73.8 20 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Phosphohistidine domain Family:N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system 6 d1ujva_ 66.9 30 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 7 c2jv2A_ 60.6 45 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein ph1500; PDBTitle: solution structure of the n-terminal domain of ph1500 8 d1fjca_ 46.0 27 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 9 d1od5a1 45.2 25 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 10 d1q5xa_ 45.0 16 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 11 d1dm9a_ 42.6 10 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Heat shock protein 15 kD 12 c1dm9A_ 42.6 10 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical 15.5 kd protein in mrca-pcka PDBTitle: heat shock protein 15 kd 13 d1pl8a1 41.4 21 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 14 c3soeA_ 41.0 21 PDB header:signaling protein Chain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz domain- PDBTitle: crystal structure of the 3rd pdz domain of the human membrane-2 associated guanylate kinase, ww and pdz domain-containing protein 33 (magi3) 15 d2npta1 40.0 53 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain 16 d1rk8a_ 36.5 21 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 17 d1wi0a_ 36.3 53 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain 18 c1rkjA_ 35.9 21 PDB header:transcription/rna Chain: A: PDB Molecule:nucleolin; PDBTitle: solution structure of the complex formed by the two n-2 terminal rna-binding domains of nucleolin and a pre-rrna3 target 19 d1r31a1 33.8 29 Fold:Ferredoxin-like Superfamily:NAD-binding domain of HMG-CoA reductase Family:NAD-binding domain of HMG-CoA reductase 20 c2k8iA_ 33.5 18 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: solution structure of e.coli slyd 21 d1wsaa_ not modelled 32.5 16 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 22 d2et1a1 not modelled 31.5 20 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 23 c1nxjA_ not modelled 31.3 13 PDB header:unknown function Chain: A: PDB Molecule:probable s-adenosylmethionine:2- PDBTitle: structure of rv3853 from mycobacterium tuberculosis 24 d1nxja_ not modelled 31.3 13 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 25 d1wl8a1 not modelled 31.0 22 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 26 d1fxza2 not modelled 30.5 13 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 27 c1ezaA_ not modelled 29.9 18 PDB header:phosphotransferase Chain: A: PDB Molecule:enzyme i; PDBTitle: amino terminal domain of enzyme i from escherichia coli nmr,2 restrained regularized mean structure 28 c1sddA_ not modelled 29.3 21 PDB header:blood clotting Chain: A: PDB Molecule:coagulation factor v; PDBTitle: crystal structure of bovine factor vai 29 d1r61a_ not modelled 29.3 20 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Putative cyclase Family:Putative cyclase 30 d1lcya1 not modelled 29.2 41 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 31 d2hi6a1 not modelled 28.1 21 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:AF0055-like 32 c2e5hA_ not modelled 27.7 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:zinc finger cchc-type and rna-binding motif- PDBTitle: solution structure of rna binding domain in zinc finger2 cchc-type and rna binding motif 1 33 d1rgra_ not modelled 27.6 25 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 34 d1agxa_ not modelled 27.0 14 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 35 d1a8ya3 not modelled 26.9 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Calsequestrin 36 d2csja1 not modelled 26.6 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 37 c1wa1X_ not modelled 25.3 11 PDB header:reductase Chain: X: PDB Molecule:dissimilatory copper-containing nitrite PDBTitle: crystal structure of h313q mutant of alcaligenes2 xylosoxidans nitrite reductase 38 c1yq4A_ not modelled 24.7 26 PDB header:oxidoreductase Chain: A: PDB Molecule:succinate dehydrogenase flavoprotein subunit; PDBTitle: avian respiratory complex ii with 3-nitropropionate and ubiquinone 39 d2etna2 not modelled 24.5 14 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 40 d1kola2 not modelled 24.5 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 41 d2hgaa1 not modelled 24.1 26 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:MTH1368 C-terminal domain-like 42 c3kw8A_ not modelled 23.7 26 PDB header:oxidoreductase Chain: A: PDB Molecule:putative copper oxidase; PDBTitle: two-domain laccase from streptomyces coelicolor at 2.3 a resolution 43 c3c8oB_ not modelled 23.4 17 PDB header:hydrolase regulator Chain: B: PDB Molecule:regulator of ribonuclease activity a; PDBTitle: the crystal structure of rraa from pao1 44 d2bu3a1 not modelled 23.3 18 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Phytochelatin synthase 45 d1v7la_ not modelled 23.2 16 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:LeuD-like 46 d1k78a1 not modelled 22.5 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 47 c1yw7A_ not modelled 22.3 29 PDB header:hydrolase Chain: A: PDB Molecule:methionine aminopeptidase 2; PDBTitle: h-metap2 complexed with a444148 48 d2f23a2 not modelled 21.9 14 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 49 d1gtta2 not modelled 21.6 19 Fold:FAH Superfamily:FAH Family:FAH 50 d1od5a2 not modelled 21.4 17 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 51 d1x5ta1 not modelled 21.2 13 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 52 d6paxa1 not modelled 21.2 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 53 c3fm3B_ not modelled 20.6 19 PDB header:hydrolase Chain: B: PDB Molecule:methionine aminopeptidase 2; PDBTitle: crystal structure of an encephalitozoon cuniculi methionine2 aminopeptidase type 2 54 d1wi2a_ not modelled 20.4 26 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 55 c2kl1A_ not modelled 20.3 28 PDB header:protein binding Chain: A: PDB Molecule:ylbl protein; PDBTitle: solution structure of gtr34c from geobacillus thermodenitrificans.2 northeast structural genomics consortium target gtr34c 56 c3u7jA_ not modelled 20.1 17 PDB header:isomerase Chain: A: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: crystal structure of ribose-5-phosphate isomerase a from burkholderia2 thailandensis 57 c2joaA_ not modelled 19.9 54 PDB header:protein binding Chain: A: PDB Molecule:serine protease htra1; PDBTitle: htra1 bound to an optimized peptide: nmr assignment of pdz2 domain and ligand resonances 58 d1sdda1 not modelled 19.8 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 59 c3lzkC_ not modelled 19.6 24 PDB header:hydrolase Chain: C: PDB Molecule:fumarylacetoacetate hydrolase family protein; PDBTitle: the crystal structure of a probably aromatic amino acid2 degradation protein from sinorhizobium meliloti 1021 60 d1ry4a_ not modelled 19.3 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 61 c3cdzA_ not modelled 19.1 21 PDB header:blood clotting Chain: A: PDB Molecule:coagulation factor viii heavy chain; PDBTitle: crystal structure of human factor viii 62 c2krgA_ not modelled 18.6 30 PDB header:signaling protein Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf1; PDBTitle: solution structure of human sodium/ hydrogen exchange2 regulatory factor 1(150-358) 63 c3bpuA_ not modelled 18.3 24 PDB header:transferase Chain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz domain- PDBTitle: crystal structure of the 3rd pdz domain of human membrane associated2 guanylate kinase, c677s and c709s double mutant 64 c2ka9A_ not modelled 18.3 23 PDB header:cell adhesion Chain: A: PDB Molecule:disks large homolog 4; PDBTitle: solution structure of psd-95 pdz12 complexed with cypin2 peptide 65 d1rzxa_ not modelled 17.6 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 66 c1fuiB_ not modelled 17.6 15 PDB header:isomerase Chain: B: PDB Molecule:l-fucose isomerase; PDBTitle: l-fucose isomerase from escherichia coli 67 c3t6oA_ not modelled 17.5 13 PDB header:transport protein Chain: A: PDB Molecule:sulfate transporter/antisigma-factor antagonist stas; PDBTitle: the structure of an anti-sigma-factor antagonist (stas) domain protein2 from planctomyces limnophilus. 68 c3fijD_ not modelled 17.5 18 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 69 d1ueba3 not modelled 17.3 19 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 70 c2dhgA_ not modelled 17.3 11 PDB header:rna binding protein Chain: A: PDB Molecule:trna selenocysteine associated protein (secp43); PDBTitle: solution structure of the c-terminal rna recognition motif2 in trna selenocysteine associated protein 71 c2kvcA_ not modelled 17.2 19 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: solution structure of the mycobacterium tuberculosis protein rv0543c,2 a member of the duf3349 superfamily. seattle structural genomics3 center for infectious disease target mytud.17112.a 72 d1jb0k_ not modelled 17.1 44 Fold:Photosystem I reaction center subunit X, PsaK Superfamily:Photosystem I reaction center subunit X, PsaK Family:Photosystem I reaction center subunit X, PsaK 73 c1jb0K_ not modelled 17.1 44 PDB header:photosynthesis Chain: K: PDB Molecule:photosystem 1 reaction centre subunit x; PDBTitle: crystal structure of photosystem i: a photosynthetic reaction center2 and core antenna system from cyanobacteria 74 c1p1dA_ not modelled 17.1 16 PDB header:protein binding Chain: A: PDB Molecule:glutamate receptor interacting protein; PDBTitle: structural insights into the inter-domain chaperoning of2 tandem pdz domains in glutamate receptor interacting3 proteins 75 c2vfjA_ not modelled 17.0 26 PDB header:hydrolase Chain: A: PDB Molecule:tumor necrosis factor; PDBTitle: structure of the a20 ovarian tumour (otu) domain 76 c2k6pA_ not modelled 16.9 15 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein hp_1423; PDBTitle: solution structure of hypothetical protein, hp1423 77 d1vi4a_ not modelled 16.5 13 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 78 d1j3la_ not modelled 16.2 12 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 79 d2fug21 not modelled 16.2 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:NQO2-like 80 c2pkpA_ not modelled 16.1 24 PDB header:lyase Chain: A: PDB Molecule:homoaconitase small subunit; PDBTitle: crystal structure of 3-isopropylmalate dehydratase (leud)2 from methhanocaldococcus jannaschii dsm2661 (mj1271) 81 d1qdlb_ not modelled 15.9 19 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 82 c3prdA_ not modelled 15.8 24 PDB header:chaperone, isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase; PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26 83 d2vbua1 not modelled 15.8 46 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:CTP-dependent riboflavin kinase-like 84 c2qv5A_ not modelled 15.4 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu2773; PDBTitle: crystal structure of uncharacterized protein atu2773 from2 agrobacterium tumefaciens c58 85 d1obxa_ not modelled 15.4 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 86 c1obyB_ not modelled 15.4 23 PDB header:cell adhesion Chain: B: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the complex of pdz2 of syntenin with2 a syndecan-4 peptide. 87 c1obxA_ not modelled 15.4 23 PDB header:cell adhesion Chain: A: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the complex of pdz2 of syntenin with2 an interleukin 5 receptor alpha peptide. 88 c3mvnA_ not modelled 15.4 19 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo- PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp 89 c2d92A_ not modelled 15.4 28 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the fifth pdz domain of inad-like2 protein 90 c3f43A_ not modelled 15.2 10 PDB header:transcription Chain: A: PDB Molecule:putative anti-sigma factor antagonist tm1081; PDBTitle: crystal structure of a putative anti-sigma factor antagonist (tm1081)2 from thermotoga maritima at 1.59 a resolution 91 c2kfwA_ not modelled 15.2 18 PDB header:isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase PDBTitle: solution structure of full-length slyd from e.coli 92 c3i18A_ not modelled 15.1 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo2051 protein; PDBTitle: crystal structure of the pdz domain of the sdrc-like protein2 (lmo2051) from listeria monocytogenes, northeast structural3 genomics consortium target lmr166b 93 c2p4vA_ not modelled 15.1 15 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 94 d1a9xb2 not modelled 15.1 19 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 95 d2b0aa1 not modelled 15.0 29 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Putative cyclase Family:Putative cyclase 96 c2zpmA_ not modelled 15.0 30 PDB header:hydrolase Chain: A: PDB Molecule:regulator of sigma e protease; PDBTitle: crystal structure analysis of pdz domain b 97 c2cdqB_ not modelled 15.0 22 PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of arabidopsis thaliana aspartate kinase2 complexed with lysine and s-adenosylmethionine 98 d1ky9a1 not modelled 14.9 42 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 99 c3cgnA_ not modelled 14.9 18 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: crystal structure of thermophilic slyd