Emaill.a.kelley@imperial.ac.uk
DescriptionP62768
DateThu Jan 5 12:07:50 GMT 2012
Unique Job ID8b0e5b8225681ef0

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c2dnxA_



32.4 16 PDB header:transport protein
Chain: A: PDB Molecule:syntaxin-12;
PDBTitle: solution structure of rsgi ruh-063, an n-terminal domain of2 syntaxin 12 from human cdna
2c3t97B_



27.8 15 PDB header:protein transport
Chain: B: PDB Molecule:nuclear pore complex protein nup54;
PDBTitle: molecular architecture of the transport channel of the nuclear pore2 complex: nup62/nup54
3d1s94a_



24.8 18 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
4c1s94A_



24.8 18 PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:s-syntaxin;
PDBTitle: crystal structure of the habc domain of neuronal syntaxin from the2 squid loligo pealei
5d2daha1



24.2 23 Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
6d2dnaa1



23.6 14 Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
7d2bwba1



21.9 14 Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
8c2cwbA_



21.8 23 PDB header:protein binding
Chain: A: PDB Molecule:chimera of immunoglobulin g binding protein g
PDBTitle: solution structure of the ubiquitin-associated domain of2 human bmsc-ubp and its complex with ubiquitin
9d1veja1



21.3 23 Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
10c1wr1B_



20.4 14 PDB header:signaling protein
Chain: B: PDB Molecule:ubiquitin-like protein dsk2;
PDBTitle: the complex sturcture of dsk2p uba with ubiquitin
11c1m1jA_



18.5 14 PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha subunit;
PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands
12c1vp7D_



18.5 10 PDB header:hydrolase
Chain: D: PDB Molecule:exodeoxyribonuclease vii small subunit;
PDBTitle: crystal structure of exodeoxyribonuclease vii small subunit2 (np_881400.1) from bordetella pertussis at 2.40 a resolution
13c2dnaA_



17.6 14 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:unnamed protein product;
PDBTitle: solution structure of rsgi ruh-056, a uba domain from mouse2 cdna
14c2dahA_



16.8 23 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ubiquilin-3;
PDBTitle: solution structure of the c-terminal uba domain in the2 human ubiquilin 3
15c2jy5A_



16.0 18 PDB header:signaling protein
Chain: A: PDB Molecule:ubiquilin-1;
PDBTitle: nmr structure of ubiquilin 1 uba domain
16c3a2aC_



15.8 32 PDB header:transport protein
Chain: C: PDB Molecule:voltage-gated hydrogen channel 1;
PDBTitle: the structure of the carboxyl-terminal domain of the human voltage-2 gated proton channel hv1
17c1deqO_



14.3 10 PDB header:
PDB COMPND:
18c2eamA_



11.7 31 PDB header:signaling protein
Chain: A: PDB Molecule:putative 47 kda protein;
PDBTitle: solution structure of the n-terminal sam-domain of a human2 putative 47 kda protein
19c1ydiB_



11.6 22 PDB header:cell adhesion, structural protein
Chain: B: PDB Molecule:alpha-actinin 4;
PDBTitle: human vinculin head domain (vh1, 1-258) in complex with2 human alpha-actinin's vinculin-binding site (residues 731-3 760)
20d1o5ha_



10.4 15 Fold:Methenyltetrahydrofolate cyclohydrolase-like
Superfamily:Methenyltetrahydrofolate cyclohydrolase-like
Family:Methenyltetrahydrofolate cyclohydrolase-like
21c1fllA_



not modelled 10.3 13 PDB header:apoptosis
Chain: A: PDB Molecule:tnf receptor associated factor 3;
PDBTitle: molecular basis for cd40 signaling mediated by traf3
22c4a1cD_



not modelled 9.8 19 PDB header:ribosome
Chain: D: PDB Molecule:60s ribosomal protein l11;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4.
23c2dl0A_



not modelled 9.5 31 PDB header:signaling protein
Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1;
PDBTitle: solution structure of the sam-domain of the sam and sh32 domain containing protein 1
24c1n73C_



not modelled 8.7 10 PDB header:blood clotting
Chain: C: PDB Molecule:fibrin gamma chain;
PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide
25c2k4pA_



not modelled 8.2 19 PDB header:signaling protein
Chain: A: PDB Molecule:phosphatidylinositol-3,4,5-trisphosphate 5-
PDBTitle: solution structure of ship2-sam
26d1q08a_



not modelled 8.1 21 Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:DNA-binding N-terminal domain of transcription activators
27d1tafa_



not modelled 8.0 27 Fold:Histone-fold
Superfamily:Histone-fold
Family:TBP-associated factors, TAFs
28d2pa2a1



not modelled 7.7 26 Fold:alpha/beta-Hammerhead
Superfamily:Ribosomal protein L16p/L10e
Family:Ribosomal protein L10e
29c3c98B_



not modelled 7.5 12 PDB header:endocytosis/exocytosis
Chain: B: PDB Molecule:syntaxin-1a;
PDBTitle: revised structure of the munc18a-syntaxin1 complex
30c2qkqA_



not modelled 7.4 19 PDB header:transferase
Chain: A: PDB Molecule:ephrin type-b receptor 4;
PDBTitle: structure of the sam domain of human ephrin type-b receptor2 4
31d1xn7a_



not modelled 7.4 21 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein YhgG
32c2d46A_



not modelled 7.3 58 PDB header:metal transport
Chain: A: PDB Molecule:calcium channel, voltage-dependent, beta 4
PDBTitle: solution structure of the human beta4a-a domain
33d1b0xa_



not modelled 7.2 31 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
34c1b0xA_



not modelled 7.2 31 PDB header:transferase
Chain: A: PDB Molecule:protein (epha4 receptor tyrosine kinase);
PDBTitle: the crystal structure of an eph receptor sam domain reveals2 a mechanism for modular dimerization.
35d1v38a_



not modelled 6.8 38 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
36d1ug7a_



not modelled 6.8 46 Fold:Four-helical up-and-down bundle
Superfamily:Domain from hypothetical 2610208m17rik protein
Family:Domain from hypothetical 2610208m17rik protein
37c2cp8A_



not modelled 6.7 15 PDB header:protein binding
Chain: A: PDB Molecule:next to brca1 gene 1 protein;
PDBTitle: solution structure of the rsgi ruh-046, a uba domain from2 human next to brca1 gene 1 protein (kiaa0049 protein)3 r923h variant
38c2ke7A_



not modelled 6.6 31 PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat and sterile alpha motif domain-
PDBTitle: nmr structure of the first sam domain from aida1
39c1sfcD_



not modelled 6.1 18 PDB header:transport protein
Chain: D: PDB Molecule:protein (snap-25b);
PDBTitle: neuronal synaptic fusion complex
40d1ez3a_



not modelled 6.0 17 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
41c2fxpA_



not modelled 5.8 15 PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein;
PDBTitle: solution structure of the sars-coronavirus hr2 domain
42c3dpqE_



not modelled 5.7 24 PDB header:chaperone, peptide binding protein
Chain: E: PDB Molecule:chaperone protein dnak;
PDBTitle: crystal structure of the substrate binding domain of e.2 coli dnak in complex with a long pyrrhocoricin-derived3 inhibitor peptide (form b)
43c2e8nA_



not modelled 5.6 31 PDB header:transferase, signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: solution structure of the c-terminal sam-domain of ephaa2:2 ephrin type-a receptor 2 precursor (ec 2.7.10.1)
44c3pvpA_



not modelled 5.6 13 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:chromosomal replication initiator protein dnaa;
PDBTitle: structure of mycobacterium tuberculosis dnaa-dbd in complex with box22 dna
45c2npsD_



not modelled 5.5 19 PDB header:transport protein
Chain: D: PDB Molecule:syntaxin-6;
PDBTitle: crystal structure of the early endosomal snare complex
46c2zshB_



not modelled 5.3 27 PDB header:hormone receptor
Chain: B: PDB Molecule:della protein gai;
PDBTitle: structural basis of gibberellin(ga3)-induced della2 recognition by the gibberellin receptor
47d1sgga_



not modelled 5.3 13 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
48d1gm5a1



not modelled 5.2 17 Fold:Four-helical up-and-down bundle
Superfamily:RecG, N-terminal domain
Family:RecG, N-terminal domain
49c3zqsB_



not modelled 5.2 19 PDB header:ligase
Chain: B: PDB Molecule:e3 ubiquitin-protein ligase fancl;
PDBTitle: human fancl central domain