Email l.a.kelley@imperial.ac.uk Description P10030 Date Thu Jan 5 11:31:59 GMT 2012 Unique Job ID 87b219f7c3f6d0d4

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1mnta_ 89.7 30 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 2 c1u9pA_ 79.8 22 PDB header:unknown function Chain: A: PDB Molecule:parc; PDBTitle: permuted single-chain arc 3 d1myla_ 53.5 23 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 4 c2kkeA_ 51.9 39 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of a dimeric protein of unknown2 function from methanobacterium thermoautotrophicum,3 northeast structural genomics consortium target tr5 5 d1b28a_ 51.8 23 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 6 d1mylb_ 50.4 23 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 7 d1bazb_ 47.6 28 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 8 d1baza_ 45.4 28 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 9 d1bdta_ 44.8 28 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 10 d1myka_ 44.5 30 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 11 c3gtdB_ 32.9 17 PDB header:lyase Chain: B: PDB Molecule:fumarate hydratase class ii; PDBTitle: 2.4 angstrom crystal structure of fumarate hydratase from rickettsia2 prowazekii 12 c3ns4A_ 31.3 16 PDB header:protein binding Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 53; PDBTitle: structure of a c-terminal fragment of its vps53 subunit suggests2 similarity of garp to a family of tethering complexes 13 d1c5ea_ 29.9 35 Fold:beta-clip Superfamily:Head decoration protein D (gpD, major capsid protein D) Family:Head decoration protein D (gpD, major capsid protein D) 14 c2dvlB_ 27.1 25 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of project tt0160 from thermus thermophilus hb8 15 c3h37B_ 26.9 17 PDB header:transferase Chain: B: PDB Molecule:trna nucleotidyl transferase-related protein; PDBTitle: the structure of cca-adding enzyme apo form i 16 d1td4a_ 24.2 29 Fold:beta-clip Superfamily:Head decoration protein D (gpD, major capsid protein D) Family:Head decoration protein D (gpD, major capsid protein D) 17 d1egda2 22.7 23 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 18 c2a1tC_ 22.6 23 PDB header:oxidoreductase/electron transport Chain: C: PDB Molecule:acyl-coa dehydrogenase, medium-chain specific, PDBTitle: structure of the human mcad:etf e165betaa complex 19 c1egcB_ 19.2 23 PDB header:electron transfer Chain: B: PDB Molecule:medium chain acyl-coa dehydrogenase; PDBTitle: structure of t255e, e376g mutant of human medium chain acyl-2 coa dehydrogenase complexed with octanoyl-coa 20 c1ukwA_ 18.5 23 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of medium-chain acyl-coa dehydrogenase2 from thermus thermophilus hb8 21 c2pg0B_ not modelled 18.1 21 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase from geobacillus2 kaustophilus 22 d1grja1 not modelled 17.7 30 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 23 c3nf4B_ not modelled 17.3 17 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase from mycobacterium2 thermoresistibile bound to flavin adenine dinucleotide 24 c2cx9C_ not modelled 17.1 12 PDB header:oxidoreductase Chain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase 25 c2derA_ not modelled 16.5 28 PDB header:transferase/rna Chain: A: PDB Molecule:trna-specific 2-thiouridylase mnma; PDBTitle: cocrystal structure of an rna sulfuration enzyme mnma and2 trna-glu in the initial trna binding state 26 c2e7vA_ not modelled 15.5 11 PDB header:hydrolase Chain: A: PDB Molecule:transmembrane protease; PDBTitle: crystal structure of sea domain of transmembrane protease2 from mus musculus 27 d2i09a2 not modelled 14.8 20 Fold:DeoB insert domain-like Superfamily:DeoB insert domain-like Family:DeoB insert domain-like 28 d3mdea2 not modelled 14.1 22 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 29 d2pb9a1 not modelled 14.1 32 Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:Phosphomethylpyrimidine kinase C-terminal domain-like 30 d1pp7u_ not modelled 13.0 46 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:39 kda initiator binding protein, IBP39, N-terminal domain 31 c2rp4C_ not modelled 12.2 50 PDB header:transcription Chain: C: PDB Molecule:transcription factor p53; PDBTitle: solution structure of the oligomerization domain in dmp53 32 c2jvwA_ not modelled 12.1 50 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of uncharacterized protein q5e7h1 from vibrio2 fischeri. northeast structural genomics target vfr117 33 c2a5wC_ not modelled 12.1 24 PDB header:oxidoreductase Chain: C: PDB Molecule:sulfite reductase, desulfoviridin-type subunit gamma PDBTitle: crystal structure of the oxidized gamma-subunit of the dissimilatory2 sulfite reductase (dsrc) from archaeoglobus fulgidus 34 d1go3f_ not modelled 12.0 30 Fold:SAM domain-like Superfamily:HRDC-like Family:RNA polymerase II subunit RBP4 (RpoF) 35 c1tt9B_ not modelled 10.9 29 PDB header:transferase, lyase Chain: B: PDB Molecule:formimidoyltransferase-cyclodeaminase PDBTitle: structure of the bifunctional and golgi associated2 formiminotransferase cyclodeaminase octamer 36 c2kgnA_ not modelled 10.7 55 PDB header:signaling protein Chain: A: PDB Molecule:protein ste5; PDBTitle: solution structure of ste5pm24 in the zwitterionic dpc2 micelle 37 c2vigC_ not modelled 10.3 21 PDB header:oxidoreductase Chain: C: PDB Molecule:short-chain specific acyl-coa dehydrogenase,; PDBTitle: crystal structure of human short-chain acyl coa2 dehydrogenase 38 c2pjhA_ not modelled 10.3 19 PDB header:transport protein Chain: A: PDB Molecule:nuclear protein localization protein 4 homolog; PDBTitle: strctural model of the p97 n domain- npl4 ubd complex 39 c1rx0B_ not modelled 10.1 14 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 8, PDBTitle: crystal structure of isobutyryl-coa dehydrogenase complexed2 with substrate/ligand. 40 c3ghfA_ not modelled 9.5 18 PDB header:cell cycle Chain: A: PDB Molecule:septum site-determining protein minc; PDBTitle: crystal structure of the septum site-determining protein2 minc from salmonella typhimurium 41 c3bjqA_ not modelled 9.2 29 PDB header:viral protein Chain: A: PDB Molecule:phage-related protein; PDBTitle: crystal structure of a phage-related protein (bb3626) from bordetella2 bronchiseptica rb50 at 2.05 a resolution 42 c2l4uA_ not modelled 8.9 55 PDB header:signaling protein Chain: A: PDB Molecule:24mer peptide from protein ste5; PDBTitle: solution structure of ste5pm24 in the presence of sds micelle 43 d2phpa1 not modelled 8.9 29 Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:Phosphomethylpyrimidine kinase C-terminal domain-like 44 c2jifA_ not modelled 8.8 14 PDB header:oxidoreductase Chain: A: PDB Molecule:short/branched chain specific acyl-coa dehydrogenase; PDBTitle: structure of human short-branched chain acyl-coa2 dehydrogenase (acadsb) 45 c2kgmA_ not modelled 8.5 55 PDB header:signaling protein Chain: A: PDB Molecule:protein ste5; PDBTitle: solution structure of ste5pm24 in sds micelle 46 d1qyna_ not modelled 8.3 17 Fold:SecB-like Superfamily:SecB-like Family:Bacterial protein-export protein SecB 47 c3hieA_ not modelled 8.3 45 PDB header:exocytosis Chain: A: PDB Molecule:exocyst complex component sec3; PDBTitle: structure of the membrane-binding domain of the sec3 subunit2 of the exocyst complex 48 c3r7kB_ not modelled 8.3 18 PDB header:oxidoreductase Chain: B: PDB Molecule:probable acyl coa dehydrogenase; PDBTitle: crystal structure of a probable acyl coa dehydrogenase from2 mycobacterium abscessus atcc 19977 / dsm 44196 49 d1u5ea1 not modelled 8.2 14 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain) 50 c2zq5A_ not modelled 8.1 11 PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of sulfotransferase stf1 from2 mycobacterium tuberculosis h37rv (type1 form) 51 c2gsjA_ not modelled 7.7 24 PDB header:hydrolase Chain: A: PDB Molecule:protein ppl-2; PDBTitle: cdna cloning and 1.75a crystal structure determination of2 ppl2, a novel chimerolectin from parkia platycephala seeds3 exhibiting endochitinolytic activity 52 c3t38B_ not modelled 7.6 32 PDB header:oxidoreductase Chain: B: PDB Molecule:arsenate reductase; PDBTitle: corynebacterium glutamicum thioredoxin-dependent arsenate reductase2 cg_arsc1' 53 c2kb2A_ not modelled 7.4 27 PDB header:signaling protein, hydrolase regulator Chain: A: PDB Molecule:blrp1; PDBTitle: blrp1 bluf 54 d1yrxa1 not modelled 7.2 27 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:BLUF domain 55 d1jqia2 not modelled 7.0 18 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 56 d1v5ma_ not modelled 6.9 5 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain) 57 d2ccva1 not modelled 6.7 21 Fold:HPA-like Superfamily:Agglutinin HPA-like Family:Agglutinin HPA-like 58 c2p0fA_ not modelled 6.6 23 PDB header:ligand binding protein Chain: A: PDB Molecule:rho gtpase-activating protein 9; PDBTitle: arhgap9 ph domain in complex with ins(1,3,5)p3 59 d1ciya3 not modelled 6.6 23 Fold:Toxins' membrane translocation domains Superfamily:delta-Endotoxin (insectocide), N-terminal domain Family:delta-Endotoxin (insectocide), N-terminal domain 60 d1ukwa2 not modelled 6.5 23 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 61 c3oibB_ not modelled 6.4 25 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of a putative acyl-coa dehydrogenase from2 mycobacterium smegmatis, iodide soak 62 d1us3a2 not modelled 6.4 19 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 63 d1t3ta1 not modelled 6.3 32 Fold:RuvA C-terminal domain-like Superfamily:FGAM synthase PurL, linker domain Family:FGAM synthase PurL, linker domain 64 c1mpgB_ not modelled 6.1 30 PDB header:hydrolase Chain: B: PDB Molecule:3-methyladenine dna glycosylase ii; PDBTitle: 3-methyladenine dna glycosylase ii from escherichia coli 65 d1o6da_ not modelled 6.0 42 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 66 c2fknC_ not modelled 5.8 19 PDB header:lyase Chain: C: PDB Molecule:urocanate hydratase; PDBTitle: crystal structure of urocanase from bacillus subtilis 67 c3a58A_ not modelled 5.8 45 PDB header:protein transport/exocytosis Chain: A: PDB Molecule:exocyst complex component sec3; PDBTitle: crystal structure of sec3p - rho1p complex from2 saccharomyces cerevisiae 68 d1uwka_ not modelled 5.8 31 Fold:Urocanase Superfamily:Urocanase Family:Urocanase 69 c2xqyA_ not modelled 5.8 39 PDB header:immune system/viral protein Chain: A: PDB Molecule:envelope glycoprotein h; PDBTitle: crystal structure of pseudorabies core fragment of2 glycoprotein h in complex with fab d6.3 70 d1qy9a1 not modelled 5.5 15 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 71 d1ofcx2 not modelled 5.4 40 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:SLIDE domain 72 c3a9lB_ not modelled 5.3 27 PDB header:hydrolase Chain: B: PDB Molecule:poly-gamma-glutamate hydrolase; PDBTitle: structure of bacteriophage poly-gamma-glutamate hydrolase 73 d1vk3a1 not modelled 5.3 29 Fold:Bacillus chorismate mutase-like Superfamily:PurM N-terminal domain-like Family:PurM N-terminal domain-like 74 c1yx3A_ not modelled 5.3 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dsrc; PDBTitle: nmr structure of allochromatium vinosum dsrc: northeast2 structural genomics consortium target op4 75 c2ebaI_ not modelled 5.3 18 PDB header:oxidoreductase Chain: I: PDB Molecule:putative glutaryl-coa dehydrogenase; PDBTitle: crystal structure of the putative glutaryl-coa dehydrogenase from2 thermus thermophilus 76 d1miwa2 not modelled 5.1 22 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Poly A polymerase head domain-like 77 d1droa_ not modelled 5.1 5 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain) 78 c2jyaA_ not modelled 5.1 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1810; PDBTitle: nmr solution structure of protein atu1810 from agrobacterium2 tumefaciens. northeast structural genomics consortium target atr23,3 ontario centre for structural proteomics target atc1776 79 d1h4ra3 not modelled 5.0 16 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:First domain of FERM