Email l.a.kelley@imperial.ac.uk Description P39310 Date Thu Jan 5 11:59:16 GMT 2012 Unique Job ID 8375c059c3f4bde7

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2gu1A_ 99.2 24 PDB header:hydrolase Chain: A: PDB Molecule:zinc peptidase; PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae 2 c2l9yA_ 98.4 13 PDB header:sugar binding protein Chain: A: PDB Molecule:cvnh-lysm lectin; PDBTitle: solution structure of the mocvnh-lysm module from the rice blast2 fungus magnaporthe oryzae protein (mgg_03307) 3 c2djpA_ 98.3 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein sb145; PDBTitle: the solution structure of the lysm domain of human2 hypothetical protein sb145 4 d1e0ga_ 98.3 31 Fold:LysM domain Superfamily:LysM domain Family:LysM domain 5 d1y7ma2 98.1 23 Fold:LysM domain Superfamily:LysM domain Family:LysM domain 6 c1y7mB_ 97.2 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein bsu14040; PDBTitle: crystal structure of the b. subtilis ykud protein at 2 a2 resolution 7 c2l55A_ 58.2 19 PDB header:metal binding protein Chain: A: PDB Molecule:silb,silver efflux protein, mfp component of the three PDBTitle: solution structure of the c-terminal domain of silb from cupriavidus2 metallidurans 8 d1rr7a_ 55.8 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Middle operon regulator, Mor 9 c1rr7A_ 55.8 21 PDB header:transcription Chain: A: PDB Molecule:middle operon regulator; PDBTitle: crystal structure of the middle operon regulator protein of2 bacteriophage mu 10 c1ei5A_ 53.6 24 PDB header:hydrolase Chain: A: PDB Molecule:d-aminopeptidase; PDBTitle: crystal structure of a d-aminopeptidase from ochrobactrum2 anthropi 11 c1vzyA_ 43.6 19 PDB header:chaperone Chain: A: PDB Molecule:33 kda chaperonin; PDBTitle: crystal structure of the bacillus subtilis hsp33 12 d1nera_ 42.8 16 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 13 d2obpa1 42.7 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ReutB4095-like 14 c1zeqX_ 42.4 17 PDB header:metal binding protein Chain: X: PDB Molecule:cation efflux system protein cusf; PDBTitle: 1.5 a structure of apo-cusf residues 6-88 from escherichia2 coli 15 d2jn6a1 42.0 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Cgl2762-like 16 c2elhA_ 40.2 23 PDB header:dna binding protein Chain: A: PDB Molecule:cg11849-pa; PDBTitle: solution structure of the cenp-b n-terminal dna-binding2 domain of fruit fly distal antenna cg11849-pa 17 c2pmzV_ 38.9 8 PDB header:translation, transferase Chain: V: PDB Molecule:dna-directed rna polymerase subunit h; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 18 c1vq0A_ 38.8 11 PDB header:chaperone Chain: A: PDB Molecule:33 kda chaperonin; PDBTitle: crystal structure of 33 kda chaperonin (heat shock protein 33 homolog)2 (hsp33) (tm1394) from thermotoga maritima at 2.20 a resolution 19 c2r0qF_ 37.0 15 PDB header:recombination/dna Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3; PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex 20 d1hmja_ 35.5 8 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 21 d1je3a_ not modelled 35.2 13 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 22 d1vq0a1 not modelled 32.4 11 Fold:Hsp33 domain Superfamily:Hsp33 domain Family:Hsp33 domain 23 c1hw7A_ not modelled 31.8 21 PDB header:chaperone Chain: A: PDB Molecule:heat shock protein hsp33; PDBTitle: hsp33, heat shock protein with redox-regulated chaperone activity 24 d1hw7a_ not modelled 31.8 21 Fold:Hsp33 domain Superfamily:Hsp33 domain Family:Hsp33 domain 25 c3iswA_ not modelled 31.5 14 PDB header:structural protein Chain: A: PDB Molecule:filamin-a; PDBTitle: crystal structure of filamin-a immunoglobulin-like repeat 21 bound to2 an n-terminal peptide of cftr 26 d1eika_ not modelled 31.4 10 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 27 d1vzya1 not modelled 30.8 17 Fold:Hsp33 domain Superfamily:Hsp33 domain Family:Hsp33 domain 28 d1uxca_ not modelled 29.0 13 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 29 c1i7fA_ not modelled 28.9 20 PDB header:chaperone Chain: A: PDB Molecule:heat shock protein 33; PDBTitle: crystal structure of the hsp33 domain with constitutive chaperone2 activity 30 d2i6va1 not modelled 28.6 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:EpsC C-terminal domain-like 31 c3mmlE_ not modelled 27.8 29 PDB header:hydrolase Chain: E: PDB Molecule:allophanate hydrolase subunit 2; PDBTitle: allophanate hydrolase complex from mycobacterium smegmatis, msmeg0435-2 msmeg0436 32 d2i4sa1 not modelled 25.0 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:EpsC C-terminal domain-like 33 c3cecA_ not modelled 24.6 21 PDB header:transcription Chain: A: PDB Molecule:putative antidote protein of plasmid maintenance system; PDBTitle: crystal structure of a putative antidote protein of plasmid2 maintenance system (npun_f2943) from nostoc punctiforme pcc 73102 at3 1.60 a resolution 34 d1dzfa2 not modelled 24.6 18 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 35 d1dcja_ not modelled 24.5 13 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 36 c2ia2D_ not modelled 24.3 8 PDB header:transcription Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a putative transcriptional regulator rha061952 from rhodococcus sp. rha1 37 d1i7ha_ not modelled 23.8 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 38 c3hefB_ not modelled 23.5 10 PDB header:viral protein Chain: B: PDB Molecule:gene 1 protein; PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit 39 d2fug33 not modelled 22.8 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 40 d1hfua2 not modelled 22.7 12 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 41 d1twfc2 not modelled 22.6 29 Fold:Insert subdomain of RNA polymerase alpha subunit Superfamily:Insert subdomain of RNA polymerase alpha subunit Family:Insert subdomain of RNA polymerase alpha subunit 42 d1uxda_ not modelled 22.5 13 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 43 c2zpmA_ not modelled 22.4 6 PDB header:hydrolase Chain: A: PDB Molecule:regulator of sigma e protease; PDBTitle: crystal structure analysis of pdz domain b 44 d3c8ya2 not modelled 22.4 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 45 c2gm4B_ not modelled 22.2 12 PDB header:recombination, dna Chain: B: PDB Molecule:transposon gamma-delta resolvase; PDBTitle: an activated, tetrameric gamma-delta resolvase: hin chimaera bound to2 cleaved dna 46 d2proc1 not modelled 22.2 50 Fold:Alpha-lytic protease prodomain-like Superfamily:Alpha-lytic protease prodomain Family:Alpha-lytic protease prodomain 47 d1y0pa3 not modelled 21.9 8 Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 48 d1d1la_ not modelled 21.9 22 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 49 c2pijB_ not modelled 21.2 22 PDB header:transcription Chain: B: PDB Molecule:prophage pfl 6 cro; PDBTitle: structure of the cro protein from prophage pfl 6 in pseudomonas2 fluorescens pf-5 50 d2q9oa2 not modelled 21.2 12 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 51 c2rn7A_ not modelled 21.1 9 PDB header:unknown function Chain: A: PDB Molecule:is629 orfa; PDBTitle: nmr solution structure of tnpe protein from shigella2 flexneri. northeast structural genomics target sfr125 52 d1wlha1 not modelled 20.9 22 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 53 c2brqB_ not modelled 20.9 14 PDB header:structural protein Chain: B: PDB Molecule:filamin a; PDBTitle: crystal structure of the filamin a repeat 21 complexed with2 the integrin beta7 cytoplasmic tail peptide 54 d1ei5a2 not modelled 20.9 24 Fold:Streptavidin-like Superfamily:D-aminopeptidase, middle and C-terminal domains Family:D-aminopeptidase, middle and C-terminal domains 55 c2lcvA_ not modelled 20.7 13 PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional repressor cytr; PDBTitle: structure of the cytidine repressor dna-binding domain; an alternate2 calculation 56 d1v10a2 not modelled 20.3 12 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 57 d1fdra1 not modelled 20.1 29 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 58 c3fiaA_ not modelled 20.1 16 PDB header:protein binding Chain: A: PDB Molecule:intersectin-1; PDBTitle: crystal structure of the eh 1 domain from human intersectin-2 1 protein. northeast structural genomics consortium target3 hr3646e. 59 d1kyaa2 not modelled 19.9 10 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 60 c2gu3A_ not modelled 19.0 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ypmb protein; PDBTitle: ypmb protein from bacillus subtilis 61 c3f6vA_ not modelled 18.6 13 PDB header:transcription regulator Chain: A: PDB Molecule:possible transcriptional regulator, arsr family PDBTitle: crystal structure of possible transcriptional regulator for2 arsenical resistance 62 d4fxca_ not modelled 18.3 7 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 63 c1p0oA_ not modelled 18.3 25 PDB header:ribosome Chain: A: PDB Molecule:19-mer peptide from 50s ribosomal protein l1; PDBTitle: hp (2-20) substitution of trp for gln and asp at position2 17 and 19 modification in sds-d25 micelles 64 d1aoza2 not modelled 18.1 20 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 65 d1a8pa1 not modelled 18.1 20 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 66 d1gyca2 not modelled 17.8 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 67 c2l8nA_ not modelled 17.7 12 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional repressor cytr; PDBTitle: nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna 68 c3lxfC_ not modelled 17.2 28 PDB header:metal binding protein Chain: C: PDB Molecule:ferredoxin; PDBTitle: crystal structure of [2fe-2s] ferredoxin arx from novosphingobium2 aromaticivorans 69 d2gu3a1 not modelled 16.8 10 Fold:Cystatin-like Superfamily:Cystatin/monellin Family:PepSY-like 70 d4croa_ not modelled 16.7 22 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 71 d1awda_ not modelled 16.5 10 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 72 d1bw6a_ not modelled 16.5 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding 73 d1hlva1 not modelled 16.4 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding 74 d2cuaa_ not modelled 16.0 20 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Periplasmic domain of cytochrome c oxidase subunit II 75 d2hsga1 not modelled 15.8 13 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 76 c3cuoB_ not modelled 15.6 17 PDB header:transcription regulator Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav; PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli 77 c2kjpA_ not modelled 15.6 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ylbl; PDBTitle: solution structure of protein ylbl (bsu15050) from bacillus2 subtilis, northeast structural genomics consortium target3 sr713a 78 c2xroE_ not modelled 15.3 16 PDB header:dna-binding protein/dna Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator 79 d1mkma1 not modelled 15.1 4 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional regulator IclR, N-terminal domain 80 c3h0gE_ not modelled 15.0 15 PDB header:transcription Chain: E: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe 81 d2jxca1 not modelled 15.0 10 Fold:EF Hand-like Superfamily:EF-hand Family:Eps15 homology domain (EH domain) 82 d2icta1 not modelled 15.0 7 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 83 d1nxza1 not modelled 14.9 20 Fold:PUA domain-like Superfamily:PUA domain-like Family:YggJ N-terminal domain-like 84 d1zud21 not modelled 14.7 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 85 d1lcda_ not modelled 14.7 12 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 86 c3c19A_ not modelled 14.5 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein mk0293; PDBTitle: crystal structure of protein mk0293 from methanopyrus kandleri av19 87 d1jiwi_ not modelled 14.4 19 Fold:Streptavidin-like Superfamily:beta-Barrel protease inhibitors Family:Metalloprotease inhibitor 88 c1mkmA_ not modelled 14.3 4 PDB header:transcription Chain: A: PDB Molecule:iclr transcriptional regulator; PDBTitle: crystal structure of the thermotoga maritima iclr 89 d1wxma1 not modelled 13.9 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 90 c2otgA_ not modelled 13.9 19 PDB header:contractile protein Chain: A: PDB Molecule:myosin heavy chain; PDBTitle: rigor-like structures of muscle myosins reveal key2 mechanical elements in the transduction pathways of this3 allosteric motor 91 c3p42D_ not modelled 13.7 25 PDB header:unknown function Chain: D: PDB Molecule:predicted protein; PDBTitle: structure of gfcc (ymcb), protein encoded by the e. coli group 42 capsule operon 92 d1e9ma_ not modelled 13.6 28 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 93 d3orca_ not modelled 13.4 26 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 94 d1hh2p4 not modelled 13.3 18 Fold:Transcription factor NusA, N-terminal domain Superfamily:Transcription factor NusA, N-terminal domain Family:Transcription factor NusA, N-terminal domain 95 c2kfhA_ not modelled 13.3 16 PDB header:protein binding Chain: A: PDB Molecule:eh domain-containing protein 1; PDBTitle: structure of the c-terminal domain of ehd1 with fnyestgpftak 96 d1kk8a2 not modelled 13.2 19 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Motor proteins 97 d1d0xa2 not modelled 13.1 18 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Motor proteins 98 c2o0yB_ not modelled 13.1 19 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator rha1_ro069532 (iclr-family) from rhodococcus sp. 99 d1d4ca3 not modelled 13.1 27 Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain