Email l.a.kelley@imperial.ac.uk Description P36659 Date Thu Jan 5 11:53:32 GMT 2012 Unique Job ID 763943fcd0737153

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3lz8A_ 100.0 82 PDB header:chaperone Chain: A: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone dnaj from klebsiella pneumoniae2 subsp. pneumoniae mgh 78578 at 2.9 a resolution. 2 c2q2gA_ 100.0 23 PDB header:chaperone Chain: A: PDB Molecule:heat shock 40 kda protein, putative (fragment); PDBTitle: crystal structure of dimerization domain of hsp40 from2 cryptosporidium parvum, cgd2_1800 3 c2qldA_ 100.0 23 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 1; PDBTitle: human hsp40 hdj1 4 c1nltA_ 100.0 22 PDB header:protein transport Chain: A: PDB Molecule:mitochondrial protein import protein mas5; PDBTitle: the crystal structure of hsp40 ydj1 5 c2b26A_ 100.0 22 PDB header:chaperone/protein transport Chain: A: PDB Molecule:sis1 protein; PDBTitle: the crystal structure of the protein complex of yeast hsp402 sis1 and hsp70 ssa1 6 c3i38D_ 100.0 80 PDB header:chaperone Chain: D: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 7 c3i38K_ 99.9 79 PDB header:chaperone Chain: K: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 8 c3i38G_ 99.9 80 PDB header:chaperone Chain: G: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 9 c3i38A_ 99.9 80 PDB header:chaperone Chain: A: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 10 c3i38B_ 99.9 79 PDB header:chaperone Chain: B: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 11 c3i38J_ 99.9 79 PDB header:chaperone Chain: J: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 12 c3i38F_ 99.9 80 PDB header:chaperone Chain: F: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 13 c3apqB_ 99.9 30 PDB header:oxidoreductase Chain: B: PDB Molecule:dnaj homolog subfamily c member 10; PDBTitle: crystal structure of j-trx1 fragment of erdj5 14 c3i38H_ 99.9 79 PDB header:chaperone Chain: H: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 15 c3i38E_ 99.9 81 PDB header:chaperone Chain: E: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 16 c3i38C_ 99.9 81 PDB header:chaperone Chain: C: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 17 c3i38L_ 99.9 81 PDB header:chaperone Chain: L: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 18 c3i38I_ 99.9 78 PDB header:chaperone Chain: I: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 19 c2l6lA_ 99.9 21 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily c member 24; PDBTitle: solution structure of human j-protein co-chaperone, dph4 20 c2kqxA_ 99.9 100 PDB header:chaperone binding protein Chain: A: PDB Molecule:curved dna-binding protein; PDBTitle: nmr structure of the j-domain (residues 2-72) in the2 escherichia coli cbpa 21 c2ctqA_ not modelled 99.9 28 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily c member 12; PDBTitle: solution structure of j-domain from human dnaj subfamily c2 menber 12 22 d1hdja_ not modelled 99.9 45 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 23 c1fpoA_ not modelled 99.9 24 PDB header:chaperone Chain: A: PDB Molecule:chaperone protein hscb; PDBTitle: hsc20 (hscb), a j-type co-chaperone from e. coli 24 c2dmxA_ not modelled 99.9 35 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 8; PDBTitle: solution structure of the j domain of dnaj homolog2 subfamily b member 8 25 c3bvoA_ not modelled 99.9 21 PDB header:chaperone Chain: A: PDB Molecule:co-chaperone protein hscb, mitochondrial precursor; PDBTitle: crystal structure of human co-chaperone protein hscb 26 c2yuaA_ not modelled 99.9 28 PDB header:chaperone Chain: A: PDB Molecule:williams-beuren syndrome chromosome region 18 PDBTitle: solution structure of the dnaj domain from human williams-2 beuren syndrome chromosome region 18 protein 27 c3hhoA_ not modelled 99.9 29 PDB header:chaperone Chain: A: PDB Molecule:co-chaperone protein hscb homolog; PDBTitle: chaperone hscb from vibrio cholerae 28 c2ctrA_ not modelled 99.9 42 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 9; PDBTitle: solution structure of j-domain from human dnaj subfamily b2 menber 9 29 c2ctwA_ not modelled 99.9 33 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily c member 5; PDBTitle: solution structure of j-domain from mouse dnaj subfamily c2 menber 5 30 d1c3ga2 not modelled 99.8 26 Fold:HSP40/DnaJ peptide-binding domain Superfamily:HSP40/DnaJ peptide-binding domain Family:HSP40/DnaJ peptide-binding domain 31 c2lgwA_ not modelled 99.8 45 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 2; PDBTitle: solution structure of the j domain of hsj1a 32 d1xbla_ not modelled 99.8 49 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 33 c2cugA_ not modelled 99.8 39 PDB header:chaperone Chain: A: PDB Molecule:mkiaa0962 protein; PDBTitle: solution structure of the j domain of the pseudo dnaj2 protein, mouse hypothetical mkiaa0962 34 c2ctpA_ not modelled 99.8 39 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 12; PDBTitle: solution structure of j-domain from human dnaj subfamily b2 menber 12 35 c2o37A_ not modelled 99.8 33 PDB header:chaperone Chain: A: PDB Molecule:protein sis1; PDBTitle: j-domain of sis1 protein, hsp40 co-chaperone from2 saccharomyces cerevisiae. 36 c2qsaA_ not modelled 99.8 39 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog dnj-2; PDBTitle: crystal structure of j-domain of dnaj homolog dnj-2 precursor from2 c.elegans. 37 c2dn9A_ not modelled 99.8 45 PDB header:apoptosis, chaperone Chain: A: PDB Molecule:dnaj homolog subfamily a member 3; PDBTitle: solution structure of j-domain from the dnaj homolog, human2 tid1 protein 38 c1xaoA_ not modelled 99.8 18 PDB header:chaperone Chain: A: PDB Molecule:mitochondrial protein import protein mas5; PDBTitle: hsp40-ydj1 dimerization domain 39 d1gh6a_ not modelled 99.8 14 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 40 c1bq0A_ not modelled 99.8 47 PDB header:chaperone Chain: A: PDB Molecule:dnaj; PDBTitle: j-domain (residues 1-77) of the escherichia coli n-terminal2 fragment (residues 1-104) of the molecular chaperone dnaj,3 nmr, 20 structures 41 c2ys8A_ not modelled 99.8 34 PDB header:protein binding Chain: A: PDB Molecule:rab-related gtp-binding protein rabj; PDBTitle: solution structure of the dnaj-like domain from human ras-2 associated protein rap1 42 c2ochA_ not modelled 99.8 45 PDB header:chaperone Chain: A: PDB Molecule:hypothetical protein dnj-12; PDBTitle: j-domain of dnj-12 from caenorhabditis elegans 43 d1iura_ not modelled 99.8 26 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 44 d1wjza_ not modelled 99.8 28 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 45 c2pf4E_ not modelled 99.7 15 PDB header:hydrolase regulator/viral protein Chain: E: PDB Molecule:small t antigen; PDBTitle: crystal structure of the full-length simian virus 40 small t antigen2 complexed with the protein phosphatase 2a aalpha subunit 46 d1nlta2 not modelled 99.7 24 Fold:HSP40/DnaJ peptide-binding domain Superfamily:HSP40/DnaJ peptide-binding domain Family:HSP40/DnaJ peptide-binding domain 47 d1fpoa1 not modelled 99.7 31 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 48 d1fafa_ not modelled 99.7 15 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 49 c2guzO_ not modelled 99.6 22 PDB header:chaperone, protein transport Chain: O: PDB Molecule:mitochondrial import inner membrane translocase PDBTitle: structure of the tim14-tim16 complex of the mitochondrial2 protein import motor 50 d1nz6a_ not modelled 99.5 23 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 51 d1n4ca_ not modelled 99.5 21 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 52 c2y4tA_ not modelled 99.4 50 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily c member 3; PDBTitle: crystal structure of the human co-chaperone p58(ipk) 53 d1c3ga1 not modelled 99.4 21 Fold:HSP40/DnaJ peptide-binding domain Superfamily:HSP40/DnaJ peptide-binding domain Family:HSP40/DnaJ peptide-binding domain 54 c3apoA_ not modelled 99.4 43 PDB header:oxidoreductase Chain: A: PDB Molecule:dnaj homolog subfamily c member 10; PDBTitle: crystal structure of full-length erdj5 55 c2guzD_ not modelled 99.3 18 PDB header:chaperone, protein transport Chain: D: PDB Molecule:mitochondrial import inner membrane translocase PDBTitle: structure of the tim14-tim16 complex of the mitochondrial2 protein import motor 56 c3ag7A_ not modelled 99.2 20 PDB header:plant protein Chain: A: PDB Molecule:putative uncharacterized protein f9e10.5; PDBTitle: an auxilin-like j-domain containing protein, jac1 j-domain 57 d1nlta1 not modelled 99.2 20 Fold:HSP40/DnaJ peptide-binding domain Superfamily:HSP40/DnaJ peptide-binding domain Family:HSP40/DnaJ peptide-binding domain 58 c3uo2A_ not modelled 98.8 24 PDB header:chaperone Chain: A: PDB Molecule:j-type co-chaperone jac1, mitochondrial; PDBTitle: jac1 co-chaperone from saccharomyces cerevisiae 59 c3epvB_ not modelled 60.3 18 PDB header:metal binding protein Chain: B: PDB Molecule:nickel and cobalt resistance protein cnrr; PDBTitle: x-ray structure of the metal-sensor cnrx in both the apo- and copper-2 bound forms 60 c2cttA_ not modelled 54.0 6 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily a member 3; PDBTitle: solution structure of zinc finger domain from human dnaj2 subfamily a menber 3 61 d2q37a1 not modelled 49.6 21 Fold:UraD-like Superfamily:UraD-Like Family:UraD-like 62 c2q37A_ not modelled 49.6 21 PDB header:plant protein, lyase Chain: A: PDB Molecule:ohcu decarboxylase; PDBTitle: crystal structure of ohcu decarboxylase in the presence of2 (s)-allantoin 63 d2o8ia1 not modelled 49.1 31 Fold:UraD-like Superfamily:UraD-Like Family:UraD-like 64 d2o70a1 not modelled 45.6 10 Fold:UraD-like Superfamily:UraD-Like Family:UraD-like 65 d1ug2a_ not modelled 44.0 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 66 d1nlta3 not modelled 40.5 9 Fold:DnaJ/Hsp40 cysteine-rich domain Superfamily:DnaJ/Hsp40 cysteine-rich domain Family:DnaJ/Hsp40 cysteine-rich domain 67 c2cs1A_ not modelled 40.1 21 PDB header:dna binding protein Chain: A: PDB Molecule:pms1 protein homolog 1; PDBTitle: solution structure of the hmg domain of human dna mismatch2 repair protein 68 c3m1gC_ not modelled 37.8 28 PDB header:transferase Chain: C: PDB Molecule:putative glutathione s-transferase; PDBTitle: the structure of a putative glutathione s-transferase from2 corynebacterium glutamicum 69 c2bl0B_ not modelled 37.6 16 PDB header:muscle protein Chain: B: PDB Molecule:myosin regulatory light chain; PDBTitle: physarum polycephalum myosin ii regulatory domain 70 c2jucA_ not modelled 37.0 12 PDB header:unknown function Chain: A: PDB Molecule:pre-mrna-splicing factor urn1; PDBTitle: urn1 ff domain yeast 71 c3orjA_ not modelled 35.5 22 PDB header:sugar binding protein Chain: A: PDB Molecule:sugar-binding protein; PDBTitle: crystal structure of a sugar-binding protein (bacova_04391) from2 bacteroides ovatus at 2.16 a resolution 72 d3saka_ not modelled 35.1 42 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 73 c2crjA_ not modelled 34.3 21 PDB header:gene regulation Chain: A: PDB Molecule:swi/snf-related matrix-associated actin- PDBTitle: solution structure of the hmg domain of mouse hmg domain2 protein hmgx2 74 c2co9A_ not modelled 33.6 19 PDB header:transcription Chain: A: PDB Molecule:thymus high mobility group box protein tox; PDBTitle: solution structure of the hmg_box domain of thymus high2 mobility group box protein tox from mouse 75 c3nv4A_ not modelled 33.5 17 PDB header:sugar binding protein Chain: A: PDB Molecule:galectin 9 short isoform variant; PDBTitle: crystal structure of human galectin-9 c-terminal crd in complex with2 sialyllactose 76 c1wz6A_ not modelled 33.1 24 PDB header:transcription Chain: A: PDB Molecule:hmg-box transcription factor bbx; PDBTitle: solution structure of the hmg_box domain of murine bobby2 sox homolog 77 d1exka_ not modelled 32.7 13 Fold:DnaJ/Hsp40 cysteine-rich domain Superfamily:DnaJ/Hsp40 cysteine-rich domain Family:DnaJ/Hsp40 cysteine-rich domain 78 c2ww9K_ not modelled 31.9 29 PDB header:ribosome Chain: K: PDB Molecule:60s ribosomal protein l25; PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome 79 c3najA_ not modelled 31.7 11 PDB header:sugar binding protein Chain: A: PDB Molecule:galectin-8; PDBTitle: crystal structure of a protease-resistant mutant form of human2 galectin-8 80 c1u5tA_ not modelled 30.4 11 PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex 81 d1vqos1 not modelled 29.1 12 Fold:Ribosomal proteins S24e, L23 and L15e Superfamily:Ribosomal proteins S24e, L23 and L15e Family:L23p 82 d1h8ba_ not modelled 28.3 28 Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins 83 c2zgtB_ not modelled 28.3 7 PDB header:hydrolase Chain: B: PDB Molecule:anti-tumor lectin; PDBTitle: crystal structure of agrocybe aegerita lectin aal mutant2 f93g 84 c2e6oA_ not modelled 27.2 19 PDB header:transcription, cell cycle Chain: A: PDB Molecule:hmg box-containing protein 1; PDBTitle: solution structure of the hmg box domain from human hmg-box2 transcription factor 1 85 c3fn2A_ not modelled 26.5 25 PDB header:transferase Chain: A: PDB Molecule:putative sensor histidine kinase domain; PDBTitle: crystal structure of a putative sensor histidine kinase domain from2 clostridium symbiosum atcc 14940 86 c2go54_ not modelled 25.3 35 PDB header:translation/rna Chain: 4: PDB Molecule:ribosomal protein l23; PDBTitle: structure of signal recognition particle receptor (sr) in2 complex with signal recognition particle (srp) and3 ribosome nascent chain complex 87 c2d6lX_ not modelled 24.5 14 PDB header:sugar binding protein Chain: X: PDB Molecule:lectin, galactose binding, soluble 9; PDBTitle: crystal structure of mouse galectin-9 n-terminal crd2 (crystal form 2) 88 d1cf7a_ not modelled 24.5 33 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Cell cycle transcription factor e2f-dp 89 d2zjrq1 not modelled 24.4 29 Fold:Ribosomal proteins S24e, L23 and L15e Superfamily:Ribosomal proteins S24e, L23 and L15e Family:L23p 90 d1wgfa_ not modelled 24.3 21 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 91 c2zkrs_ not modelled 24.1 29 PDB header:ribosomal protein/rna Chain: S: PDB Molecule:rna expansion segment es39 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 92 c3dkqB_ not modelled 23.9 19 PDB header:oxidoreductase Chain: B: PDB Molecule:pkhd-type hydroxylase sbal_3634; PDBTitle: crystal structure of putative oxygenase (yp_001051978.1) from2 shewanella baltica os155 at 2.26 a resolution 93 c3u2bC_ not modelled 23.5 19 PDB header:transcription/dna Chain: C: PDB Molecule:transcription factor sox-4; PDBTitle: structure of the sox4 hmg domain bound to dna 94 d2gala_ not modelled 22.8 22 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Galectin (animal S-lectin) 95 c2j11D_ not modelled 22.8 42 PDB header:transcription Chain: D: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant y327s t329g q331g 96 d2cqna1 not modelled 22.5 16 Fold:Another 3-helical bundle Superfamily:FF domain Family:FF domain 97 c2rq5A_ not modelled 22.3 20 PDB header:transcription Chain: A: PDB Molecule:protein jumonji; PDBTitle: solution structure of the at-rich interaction domain (arid)2 of jumonji/jarid2 98 d1aiea_ not modelled 22.1 42 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 99 c4a17R_ not modelled 21.7 29 PDB header:ribosome Chain: R: PDB Molecule:rpl23a; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2. 100 c2j10B_ not modelled 21.5 42 PDB header:transcription Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k 101 c2j10A_ not modelled 21.5 42 PDB header:transcription Chain: A: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k 102 c2j10D_ not modelled 21.5 42 PDB header:transcription Chain: D: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k 103 d1i32a2 not modelled 20.4 14 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:GAPDH-like