Email l.a.kelley@imperial.ac.uk Description Q2EES0 Date Thu Jan 5 12:33:46 GMT 2012 Unique Job ID 73c381edb32bc020

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2bj7a1 70.8 20 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 2 d2hzab1 63.3 21 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 3 d2hzaa1 55.8 19 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 4 c2ca9B_ 48.9 14 PDB header:transcriptional regulation Chain: B: PDB Molecule:putative nickel-responsive regulator; PDBTitle: apo-nikr from helicobacter pylori in closed trans-2 conformation 5 c2bj3D_ 39.6 22 PDB header:transcription Chain: D: PDB Molecule:nickel responsive regulator; PDBTitle: nikr-apo 6 c1q5vB_ 33.3 20 PDB header:transcription Chain: B: PDB Molecule:nickel responsive regulator; PDBTitle: apo-nikr 7 d1y9ba1 25.3 14 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:VCA0319-like 8 d2i5ua1 24.0 12 Fold:DnaD domain-like Superfamily:DnaD domain-like Family:DnaD domain 9 d1qu3a1 21.6 12 Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 10 c1wn4A_ 20.9 38 PDB header:plant protein Chain: A: PDB Molecule:vontr protein; PDBTitle: nmr structure of vontr 11 d1ku2a1 17.9 50 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma3 domain 12 c2lf0A_ 16.7 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein yibl; PDBTitle: solution structure of sf3636, a two-domain unknown function protein2 from shigella flexneri 2a, determined by joint refinement of nmr,3 residual dipolar couplings and small-angle x-ray scatting, nesg4 target sfr339/ocsp target sf3636 13 d2c5ra1 16.3 50 Fold:Phage replication organizer domain Superfamily:Phage replication organizer domain Family:Phage replication organizer domain 14 d1mnta_ 15.8 27 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 15 c2k53A_ 14.4 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:a3dk08 protein; PDBTitle: nmr solution structure of a3dk08 protein from clostridium2 thermocellum: northeast structural genomics consortium3 target cmr9 16 c2agaA_ 14.3 38 PDB header:transcription Chain: A: PDB Molecule:machado-joseph disease protein 1; PDBTitle: de-ubiquitinating function of ataxin-3: insights from the2 solution structure of the josephin domain 17 c2y0fD_ 10.7 9 PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 18 c2l3yA_ 9.9 27 PDB header:transcription Chain: A: PDB Molecule:interleukin-6; PDBTitle: solution structure of mouse il-6 19 d1m56d_ 8.6 27 Fold:Single transmembrane helix Superfamily:Bacterial aa3 type cytochrome c oxidase subunit IV Family:Bacterial aa3 type cytochrome c oxidase subunit IV 20 d1yzma1 8.4 18 Fold:Long alpha-hairpin Superfamily:Rabenosyn-5 Rab-binding domain-like Family:Rabenosyn-5 Rab-binding domain-like 21 d1pd3a_ not modelled 8.1 60 Fold:ROP-like Superfamily:Nonstructural protein ns2, Nep, M1-binding domain Family:Nonstructural protein ns2, Nep, M1-binding domain 22 c2p22D_ not modelled 8.1 22 PDB header:transport protein Chain: D: PDB Molecule:hypothetical 12.0 kda protein in ade3-ser2 PDBTitle: structure of the yeast escrt-i heterotetramer core 23 d1i1rb_ not modelled 7.8 58 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Long-chain cytokines 24 d1mg7a2 not modelled 7.4 25 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:Early switch protein XOL-1 25 d1kkea1 not modelled 7.2 41 Fold:Triple beta-spiral Superfamily:Fibre shaft of virus attachment proteins Family:Reovirus attachment protein sigma 1 26 d1ivsa2 not modelled 7.1 21 Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 27 d1z0kb1 not modelled 6.6 25 Fold:Long alpha-hairpin Superfamily:Rabenosyn-5 Rab-binding domain-like Family:Rabenosyn-5 Rab-binding domain-like 28 d3saka_ not modelled 6.4 43 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 29 d1mvfd_ not modelled 6.4 23 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 30 d1az3a_ not modelled 6.0 42 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Restriction endonuclease EcoRV 31 d1vq3a_ not modelled 5.8 33 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 32 d1ffya1 not modelled 5.7 12 Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33 c3kz5E_ not modelled 5.7 43 PDB header:dna binding protein Chain: E: PDB Molecule:protein sopb; PDBTitle: structure of cdomain 34 d1gs0a1 not modelled 5.5 20 Fold:Domain of poly(ADP-ribose) polymerase Superfamily:Domain of poly(ADP-ribose) polymerase Family:Domain of poly(ADP-ribose) polymerase 35 c1u9pA_ not modelled 5.3 13 PDB header:unknown function Chain: A: PDB Molecule:parc; PDBTitle: permuted single-chain arc 36 c3ostA_ not modelled 5.2 27 PDB header:lipid binding protein Chain: A: PDB Molecule:serine/threonine-protein kinase kcc4; PDBTitle: structure of the kinase associated-1 (ka1) from kcc4p