Email l.a.kelley@imperial.ac.uk Description P29131 Date Thu Jan 5 11:45:35 GMT 2012 Unique Job ID 73a762ade1748b15

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1utaa_ 99.9 100 Fold:Ferredoxin-like Superfamily:Sporulation related repeat Family:Sporulation related repeat 2 c1x60A_ 99.8 29 PDB header:hydrolase Chain: A: PDB Molecule:sporulation-specific n-acetylmuramoyl-l-alanine PDBTitle: solution structure of the peptidoglycan binding domain of2 b. subtilis cell wall lytic enzyme cwlc 3 c3caiA_ 88.0 22 PDB header:transferase Chain: A: PDB Molecule:possible aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis rv3778c2 protein 4 d1bs0a_ 87.6 17 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 5 d1elua_ 85.5 13 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 6 c3f9tB_ 81.6 19 PDB header:lyase Chain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution 7 d1t3ia_ 65.9 23 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 8 c2k49A_ 59.9 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0339 protein so_3888; PDBTitle: solution nmr structure of upf0339 protein so3888 from shewanella2 oneidensis. northeast structural genomics consortium target sor190 9 d1iuga_ 59.2 10 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 10 c3hdoB_ 59.1 24 PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a histidinol-phosphate aminotransferase from2 geobacter metallireducens 11 c3cq6E_ 58.3 18 PDB header:transferase Chain: E: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: histidinol-phosphate aminotransferase from corynebacterium2 glutamicum holo-form (plp covalently bound ) 12 d1m32a_ 58.0 13 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 13 c2fyfB_ 56.4 18 PDB header:transferase Chain: B: PDB Molecule:phosphoserine aminotransferase; PDBTitle: structure of a putative phosphoserine aminotransferase from2 mycobacterium tuberculosis 14 c2yrrA_ 52.9 23 PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class v; PDBTitle: hypothetical alanine aminotransferase (tth0173) from thermus2 thermophilus hb8 15 d1qz9a_ 52.8 13 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 16 d1v72a1 52.6 22 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 17 c3hqtB_ 49.8 19 PDB header:transferase Chain: B: PDB Molecule:cai-1 autoinducer synthase; PDBTitle: plp-dependent acyl-coa transferase cqsa 18 d1wyua1 47.6 20 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Glycine dehydrogenase subunits (GDC-P) 19 c3rggD_ 46.5 19 PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air 20 d2f8ja1 46.5 22 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 21 c2k8eA_ not modelled 46.3 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0339 protein yegp; PDBTitle: solution nmr structure of protein of unknown function yegp from e.2 coli. ontario center for structural proteomics target ec0640_1_1233 northeast structural genomics consortium target et102. 22 d1eg5a_ not modelled 44.5 17 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 23 c3p3dA_ not modelled 44.2 21 PDB header:nuclear protein Chain: A: PDB Molecule:nucleoporin 53; PDBTitle: crystal structure of the nup53 rrm domain from pichia guilliermondii 24 d1gcca_ not modelled 43.5 26 Fold:DNA-binding domain Superfamily:DNA-binding domain Family:GCC-box binding domain 25 c2adbA_ not modelled 43.0 9 PDB header:rna binding protein/rna Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1; PDBTitle: solution structure of polypyrimidine tract binding protein2 rbd2 complexed with cucucu rna 26 d1dq3a4 not modelled 41.6 14 Fold:Homing endonuclease-like Superfamily:Homing endonucleases Family:Intein endonuclease 27 c2y9jt_ not modelled 41.0 14 PDB header:protein transport Chain: T: PDB Molecule:protein prgh; PDBTitle: three-dimensional model of salmonella's needle complex at2 subnanometer resolution 28 d1u11a_ not modelled 40.0 16 Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 29 c2w8wA_ not modelled 39.7 19 PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: n100y spt with plp-ser 30 d2c0ra1 not modelled 38.5 16 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 31 c2x7iA_ not modelled 37.9 17 PDB header:transferase Chain: A: PDB Molecule:mevalonate kinase; PDBTitle: crystal structure of mevalonate kinase from methicillin-2 resistant staphylococcus aureus mrsa252 32 c3a2bA_ not modelled 37.6 13 PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: crystal structure of serine palmitoyltransferase from sphingobacterium2 multivorum with substrate l-serine 33 d1ztpa1 not modelled 36.4 8 Fold:eIF4e-like Superfamily:eIF4e-like Family:BLES03-like 34 d1nz8a_ not modelled 35.9 17 Fold:Ferredoxin-like Superfamily:N-utilization substance G protein NusG, N-terminal domain Family:N-utilization substance G protein NusG, N-terminal domain 35 d1wg1a_ not modelled 35.7 8 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 36 c2fw9A_ not modelled 35.2 16 PDB header:lyase Chain: A: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide mutase; PDBTitle: structure of pure (n5-carboxyaminoimidazole ribonucleotide mutase)2 h59f from the acidophilic bacterium acetobacter aceti, at ph 8 37 d2hk6a1 not modelled 33.5 15 Fold:Chelatase-like Superfamily:Chelatase Family:Ferrochelatase 38 d1jf9a_ not modelled 33.3 17 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 39 c3f0hA_ not modelled 33.2 13 PDB header:transferase Chain: A: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (rer070207000802) from2 eubacterium rectale at 1.70 a resolution 40 c3pn8A_ not modelled 32.3 18 PDB header:hydrolase Chain: A: PDB Molecule:putative phospho-beta-glucosidase; PDBTitle: the crystal structure of 6-phospho-beta-glucosidase from streptococcus2 mutans ua159 41 c3lp6D_ not modelled 32.1 21 PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase catalytic subunit; PDBTitle: crystal structure of rv3275c-e60a from mycobacterium tuberculosis at2 1.7a resolution 42 d1qcza_ not modelled 31.8 16 Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 43 c3e9kA_ not modelled 31.1 17 PDB header:hydrolase Chain: A: PDB Molecule:kynureninase; PDBTitle: crystal structure of homo sapiens kynureninase-3-hydroxyhippuric acid2 inhibitor complex 44 c3trhI_ not modelled 30.8 16 PDB header:lyase Chain: I: PDB Molecule:phosphoribosylaminoimidazole carboxylase PDBTitle: structure of a phosphoribosylaminoimidazole carboxylase catalytic2 subunit (pure) from coxiella burnetii 45 c2dr1A_ not modelled 29.2 11 PDB header:transferase Chain: A: PDB Molecule:386aa long hypothetical serine aminotransferase; PDBTitle: crystal structure of the ph1308 protein from pyrococcus horikoshii ot3 46 d1m6sa_ not modelled 28.6 16 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 47 c1yj7A_ not modelled 28.6 12 PDB header:protein transport Chain: A: PDB Molecule:escj; PDBTitle: crystal structure of enteropathogenic e.coli (epec) type iii secretion2 system protein escj 48 d1nh8a2 not modelled 28.1 12 Fold:Ferredoxin-like Superfamily:GlnB-like Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain 49 c3rfaA_ not modelled 27.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine 50 c2k06A_ not modelled 27.5 13 PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of the aminoterminal domain of e. coli2 nusg 51 c3cbfA_ not modelled 26.8 15 PDB header:transferase Chain: A: PDB Molecule:alpha-aminodipate aminotransferase; PDBTitle: crystal structure of lysn, alpha-aminoadipate2 aminotransferase, from thermus thermophilus hb27 52 c2j75A_ not modelled 26.7 18 PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase a; PDBTitle: beta-glucosidase from thermotoga maritima in complex with2 noeuromycin 53 c3hyjD_ not modelled 26.5 22 PDB header:transcription regulator Chain: D: PDB Molecule:protein duf199/whia; PDBTitle: crystal structure of the n-terminal laglidadg domain of duf199/whia 54 c3orsD_ not modelled 26.3 17 PDB header:isomerase,biosynthetic protein Chain: D: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide mutase; PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide mutase2 from staphylococcus aureus 55 d1xmpa_ not modelled 26.2 18 Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 56 c3nthA_ not modelled 25.0 16 PDB header:transcription Chain: A: PDB Molecule:maternal protein tudor; PDBTitle: crystal structure of tudor and aubergine [r13(me2s)] complex 57 c3mafB_ not modelled 24.1 17 PDB header:lyase Chain: B: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of stspl (asymmetric form) 58 d1js3a_ not modelled 23.7 6 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Pyridoxal-dependent decarboxylase 59 c2hzpA_ not modelled 23.7 17 PDB header:hydrolase Chain: A: PDB Molecule:kynureninase; PDBTitle: crystal structure of homo sapiens kynureninase 60 c2p2uA_ not modelled 23.6 41 PDB header:dna binding protein Chain: A: PDB Molecule:host-nuclease inhibitor protein gam, putative; PDBTitle: crystal structure of putative host-nuclease inhibitor2 protein gam from desulfovibrio vulgaris 61 c2h31A_ not modelled 23.3 18 PDB header:ligase, lyase Chain: A: PDB Molecule:multifunctional protein ade2; PDBTitle: crystal structure of human paics, a bifunctional carboxylase and2 synthetase in purine biosynthesis 62 c3nohA_ not modelled 23.1 50 PDB header:peptide binding protein Chain: A: PDB Molecule:putative peptide binding protein; PDBTitle: crystal structure of a putative peptide binding protein (rumgna_00914)2 from ruminococcus gnavus atcc 29149 at 1.60 a resolution 63 d1u0bb1 not modelled 22.5 16 Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 64 c3bfjK_ not modelled 21.3 15 PDB header:oxidoreductase Chain: K: PDB Molecule:1,3-propanediol oxidoreductase; PDBTitle: crystal structure analysis of 1,3-propanediol oxidoreductase 65 c2q5cA_ not modelled 21.1 18 PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum 66 d2cpia1 not modelled 21.0 11 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 67 d1oj4a2 not modelled 20.4 11 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE 68 d1lbqa_ not modelled 20.1 13 Fold:Chelatase-like Superfamily:Chelatase Family:Ferrochelatase 69 c2huuA_ not modelled 20.1 13 PDB header:transferase Chain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine 70 c3ffrA_ not modelled 20.0 13 PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase serc; PDBTitle: crystal structure of a phosphoserine aminotransferase serc (chu_0995)2 from cytophaga hutchinsonii atcc 33406 at 1.75 a resolution 71 d1rk8a_ not modelled 19.7 11 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 72 d1fg7a_ not modelled 19.5 17 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 73 c3ox4D_ not modelled 19.3 19 PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 2; PDBTitle: structures of iron-dependent alcohol dehydrogenase 2 from zymomonas2 mobilis zm4 complexed with nad cofactor 74 c2eqkA_ not modelled 19.0 43 PDB header:transcription Chain: A: PDB Molecule:tudor domain-containing protein 4; PDBTitle: solution structure of the tudor domain of tudor domain-2 containing protein 4 75 d1wsta1 not modelled 18.9 10 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 76 d2erra1 not modelled 18.4 8 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 77 c3o6cA_ not modelled 18.1 12 PDB header:transferase Chain: A: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: pyridoxal phosphate biosynthetic protein pdxj from campylobacter2 jejuni 78 c3hyiA_ not modelled 18.0 18 PDB header:transcription regulator Chain: A: PDB Molecule:protein duf199/whia; PDBTitle: crystal structure of full-length duf199/whia from thermatoga maritima 79 d1s0aa_ not modelled 17.9 6 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 80 c2z1sA_ not modelled 17.8 18 PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase b; PDBTitle: beta-glucosidase b from paenibacillus polymyxa complexed2 with cellotetraose 81 c2ordA_ not modelled 17.6 15 PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution 82 d1kvka2 not modelled 17.1 19 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:Mevalonate kinase 83 c2hvzA_ not modelled 16.8 7 PDB header:rna binding protein Chain: A: PDB Molecule:splicing factor, arginine/serine-rich 7; PDBTitle: solution structure of the rrm domain of sr rich factor 9g8 84 c2i38A_ not modelled 16.6 12 PDB header:rna binding protein/chimera Chain: A: PDB Molecule:fusion protein consists of immunoglobin g- PDBTitle: solution structure of the rrm of srp20 85 c2zoxA_ not modelled 16.1 18 PDB header:hydrolase Chain: A: PDB Molecule:cytosolic beta-glucosidase; PDBTitle: crystal structure of the covalent intermediate of human cytosolic2 beta-glucosidase 86 c2iruA_ not modelled 16.0 24 PDB header:transferase Chain: A: PDB Molecule:putative dna ligase-like protein rv0938/mt0965; PDBTitle: crystal structure of the polymerase domain from mycobacterium2 tuberculosis ligase d 87 c2dclB_ not modelled 15.9 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical upf0166 protein ph1503; PDBTitle: structure of ph1503 protein from pyrococcus horikoshii ot3 88 d1fsha_ not modelled 15.9 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DEP domain 89 c3md3A_ not modelled 15.9 4 PDB header:rna binding protein Chain: A: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: crystal structure of the first two rrm domains of yeast poly(u)2 binding protein (pub1) 90 d2p5ia1 not modelled 15.7 27 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:LplA-like 91 c3ml6D_ not modelled 15.5 15 PDB header:protein transport Chain: D: PDB Molecule:chimeric complex between protein dishevlled2 homolog dvl-2 PDBTitle: a complex between dishevlled2 and clathrin adaptor ap-2 92 d1pbga_ not modelled 15.2 14 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Family 1 of glycosyl hydrolase 93 d1o51a_ not modelled 14.6 16 Fold:Ferredoxin-like Superfamily:GlnB-like Family:DUF190/COG1993 94 c1v02F_ not modelled 14.2 20 PDB header:hydrolase Chain: F: PDB Molecule:dhurrinase; PDBTitle: crystal structure of the sorghum bicolor dhurrinase 1 95 d1v02a_ not modelled 14.2 20 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Family 1 of glycosyl hydrolase 96 d2a21a1 not modelled 14.2 15 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase 97 d2k7ia1 not modelled 14.1 11 Fold:YegP-like Superfamily:YegP-like Family:YegP-like 98 c2k7iB_ not modelled 14.1 11 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:upf0339 protein atu0232; PDBTitle: solution nmr structure of protein atu0232 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att3. ontario center for structural proteomics target atc0223. 99 d1rv3a_ not modelled 14.1 10 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like