Email l.a.kelley@imperial.ac.uk Description P67338 Date Thu Jan 5 12:10:34 GMT 2012 Unique Job ID 6d38ff02e079f6e5

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1wi9a_ 68.9 42 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PCI domain (PINT motif) 2 d1svdm1 32.2 30 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 3 d1iwga4 28.9 40 Fold:Ferredoxin-like Superfamily:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Family:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 4 d1rbli_ 28.8 30 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 5 c3m20A_ 26.0 27 PDB header:isomerase Chain: A: PDB Molecule:4-oxalocrotonate tautomerase, putative; PDBTitle: crystal structure of dmpi from archaeoglobus fulgidus determined to2 2.37 angstroms resolution 6 d1uzhc1 22.5 30 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 7 c2jnhA_ 22.4 24 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of the uba domain from cbl-b 8 d1ir1s_ 21.3 22 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 9 d1bcoa1 20.5 25 Fold:mu transposase, C-terminal domain Superfamily:mu transposase, C-terminal domain Family:mu transposase, C-terminal domain 10 c3itfA_ 19.9 38 PDB header:signaling protein Chain: A: PDB Molecule:periplasmic adaptor protein cpxp; PDBTitle: structural basis for the inhibitory function of the cpxp adaptor2 protein 11 c2kjwA_ 18.0 22 PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s6; PDBTitle: solution structure and backbone dynamics of the permutant2 p54-55 12 c2r9iA_ 16.9 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative phage capsid protein; PDBTitle: crystal structure of putative phage capsid protein domain from2 corynebacterium diphtheriae 13 c2d9sA_ 16.1 35 PDB header:ligase Chain: A: PDB Molecule:cbl e3 ubiquitin protein ligase; PDBTitle: solution structure of rsgi ruh-049, a uba domain from mouse2 cdna 14 d2g3qa1 15.8 22 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 15 c2rd0A_ 15.3 21 PDB header:transferase/oncoprotein Chain: A: PDB Molecule:phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic PDBTitle: structure of a human p110alpha/p85alpha complex 16 c3gyuA_ 14.7 21 PDB header:transcription Chain: A: PDB Molecule:nuclear hormone receptor of the steroid/thyroid PDBTitle: nuclear receptor daf-12 from parasitic nematode2 strongyloides stercoralis in complex with its physiological3 ligand dafachronic acid delta 7 17 c2do6A_ 14.3 24 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of rsgi ruh-065, a uba domain from human2 cdna 18 d1fsea_ 13.9 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:GerE-like (LuxR/UhpA family of transcriptional regulators) 19 c3g0tA_ 11.7 30 PDB header:transferase Chain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aspartate aminotransferase (np_905498.1)2 from porphyromonas gingivalis w83 at 1.75 a resolution 20 d1gyxa_ 11.4 16 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 21 d1g4us1 not modelled 11.2 17 Fold:Four-helical up-and-down bundle Superfamily:Bacterial GAP domain Family:Bacterial GAP domain 22 d1lq1a_ not modelled 11.2 41 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:Spo0A 23 d1cuka1 not modelled 11.1 27 Fold:RuvA C-terminal domain-like Superfamily:DNA helicase RuvA subunit, C-terminal domain Family:DNA helicase RuvA subunit, C-terminal domain 24 d1fc3a_ not modelled 10.4 39 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:Spo0A 25 d1pgya_ not modelled 10.4 40 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 26 d1he1a_ not modelled 10.1 11 Fold:Four-helical up-and-down bundle Superfamily:Bacterial GAP domain Family:Bacterial GAP domain 27 d1oqya2 not modelled 9.3 33 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 28 d1ifya_ not modelled 8.9 22 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 29 d1hy5a_ not modelled 8.4 22 Fold:Four-helical up-and-down bundle Superfamily:Bacterial GAP domain Family:Bacterial GAP domain 30 d1nzja_ not modelled 8.1 32 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 31 d1g1xb_ not modelled 8.0 19 Fold:S15/NS1 RNA-binding domain Superfamily:S15/NS1 RNA-binding domain Family:Ribosomal protein S15 32 c1yueA_ not modelled 7.5 32 PDB header:viral protein Chain: A: PDB Molecule:head vertex protein gp24; PDBTitle: bacteriophage t4 capsid vertex protein gp24 33 d1bwvs_ not modelled 7.3 42 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 34 d3c2wa1 not modelled 7.0 20 Fold:Profilin-like Superfamily:GAF domain-like Family:GAF domain 35 d1oqya1 not modelled 6.5 22 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 36 d1a04a1 not modelled 5.8 29 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:GerE-like (LuxR/UhpA family of transcriptional regulators) 37 d1bxni_ not modelled 5.7 47 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 38 d2ctma1 not modelled 5.5 19 Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I) 39 c1zljE_ not modelled 5.5 24 PDB header:transcription Chain: E: PDB Molecule:dormancy survival regulator; PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic2 response regulator dosr c-terminal domain 40 c2c4mA_ not modelled 5.2 26 PDB header:transferase Chain: A: PDB Molecule:glycogen phosphorylase; PDBTitle: starch phosphorylase: structural studies explain oxyanion-2 dependent kinetic stability and regulatory control. 41 c3cnfB_ not modelled 5.1 31 PDB header:virus Chain: B: PDB Molecule:vp1; PDBTitle: 3.88 angstrom structure of cytoplasmic polyhedrosis virus2 by cryo-electron microscopy 42 c1n93X_ not modelled 5.1 39 PDB header:viral protein Chain: X: PDB Molecule:p40 nucleoprotein; PDBTitle: crystal structure of the borna disease virus nucleoprotein