Fold library entry viewer: c2rd0A_

Added to library: Tue Mar 16 14:19:10 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	Y	Y	H	H	H	H	H	H	D	Y	D	I	G	E	L	W	G	I	H	L	M	P	P	R	I	L	V	E	C	L	L	P	N	G	M	I	V	T	L	E	C	L	R	E	A	T	L	I	T	I	K	H	E	L	F	K	E	A	R	K	Y	P	L	H	Q	L	L	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S				T	T						B	T	T	B	S	S			S									T	T	S									T	T		B												G	G	G	S	S	S	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	S	S	Y	I	F	V	S	V	T	Q	E	A	E	R	E	E	F	F	D	E	T	R	R	L	C	D	L	R	L	F	Q	P	F	L	K	V	I	E	P	V	G	N	R	E	E	K	I	L	N	R	E	I	G	F	A	I	G	M	P	V	C	E	F	D	M	V	K	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G								T	T	T								T	T	S	B	G	G	G	S			S	S	S								T	T	S							G	G	G	G					T	S		T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	V	Q	D	F	R	R	N	I	L	N	V	C	K	E	A	V	D	L	R	D	L	N	S	P	H	S	R	A	M	Y	V	Y	P	P	N	V	E	S	S	P	E	L	P	K	H	I	Y	N	K	L	D	K	G	Q	I	I	V	V	I	W	V	I	V	S	P	N	N	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T													T	T	T	T							S	S				B		S		S	S			T	T	T						S	S											T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	K	Y	T	L	K	I	N	H	D	C	V	P	E	Q	V	I	A	E	A	I	R	K	K	T	R	S	M	L	L	S	S	E	Q	L	K	L	C	V	L	E	Y	Q	G	K	Y	I	L	K	V	C	G	C	D	E	Y	F	L	E	K	Y	P	L	S	Q	Y	K	Y	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T																		T	T	S							T	T	S	S	T	T	G	G	G						S	S	S						S				G	G	G	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	C	I	M	L	G	R	M	P	N	L	M	L	M	A	K	E	S	L	Y	S	Q	L	P	M	D	C	F	T	M	P	S	K	S	L	W	V	I	N	S	A	L	R	I	K	I	L	C	A	T	Y	V	N	V	N	I	R	D	I	D	K	I	Y	V	R	T	G	I	Y	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T															T	T														S				S																		S	S											S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	G	E	P	L	C	D	N	V	N	T	Q	R	V	P	C	S	N	P	R	W	N	E	W	L	N	Y	D	I	Y	I	P	D	L	P	R	A	A	R	L	C	L	S	I	C	S	V	K	G	R	K	G	W	G	N	I	N	L	F	D	Y	T	D	T	L	V	S	G	K	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			S										S	S	S	S										S	S		S	T	T			T	T												S	S								S	B		T	T	S		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	L	N	L	W	P	V	P	H	G	L	E	D	L	L	N	P	I	G	V	T	G	S	N	P	N	K	E	T	P	C	L	E	L	E	F	D	W	F	S	S	V	V	K	F	P	D	M	S	V	I	E	E	H	A	N	W	S	V	S	R	E	A	G	K	E	Q	L	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S		S	S	S			S	S	S	T	T	S	S				S	S	S											S	S											T	T					S												S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	S	T	R	D	P	L	S	E	I	T	E	Q	E	K	D	F	L	W	S	H	R	H	Y	C	V	T	I	P	E	I	L	P	K	L	L	L	S	V	K	W	N	S	R	D	E	V	A	Q	M	Y	C	L	V	K	D	W	P	P	I	K	P	E	Q	A	M	E	L	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S		G	G	G													T	G	G	G	G	T	T	S	G	G	G							T	S		T	T														T						T	T	G	G	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	C	N	Y	P	D	P	M	V	R	G	F	A	V	R	C	L	E	K	Y	L	T	D	D	K	L	S	Q	Y	L	I	Q	L	V	Q	V	L	K	Y	E	Q	Y	L	D	N	L	L	V	R	F	L	L	K	K	A	L	T	N	Q	R	I	G	H	F	F	F	W	H	L	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																										S								G	G	G		S	S	S	S												T	T														T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	M	H	N	K	T	V	S	Q	R	F	G	L	L	L	E	S	Y	C	R	A	C	G	M	Y	L	K	H	L	N	R	Q	V	E	A	M	E	K	L	I	N	L	T	D	I	L	K	Q	E	K	K	D	E	T	Q	K	V	Q	M	K	F	L	V	E	Q	M	R	R	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																			S	T	T																								S	T	T			S													T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	F	M	D	A	L	Q	G	F	L	S	P	L	N	P	A	H	Q	L	G	N	L	R	L	E	E	C	R	I	M	S	S	A	K	R	P	L	W	L	N	W	E	N	P	D	I	M	S	E	L	L	F	Q	N	N	E	I	I	F	K	N	G	D	D	L	R	Q	D	M	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S				T	T								S	B			T	T						S	S	S												T	T	S	T	T	T	T										S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	Q	I	I	R	I	M	E	N	I	W	Q	N	Q	G	L	D	L	R	M	L	P	Y	G	C	L	S	I	G	D	C	V	G	L	I	E	V	V	R	N	S	H	T	I	M	Q	I	Q	C	K	G	G	L	K	G	A	L	Q	F	N	S	H	T	L	H	Q	W	L	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T															T	T								S	S										S	S			S	S	S		G	G	G	S	S	T	T	T					T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	K	N	K	G	E	I	Y	D	A	A	I	D	L	F	T	R	S	C	A	G	Y	C	V	A	T	F	I	L	G	I	G	D	R	H	N	S	N	I	M	V	K	D	D	G	Q	L	F	H	I	D	F	G	H	F	L	D	H	R	V	P	F	V	L	T	Q	D	F	L	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	T	T	T																								T		S				T	T	S					T	T	S									S	T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	I	S	K	G	A	Q	E	C	T	K	T	R	E	F	E	R	F	Q	E	M	C	Y	K	A	Y	L	A	I	R	Q	H	A	N	L	F	I	N	L	F	S	M	M	L	G	S	G	M	P	E	L	Q	S	F	D	D	I	A	Y	I	R	K	T	L	A	L	D	K	T	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			S	S			S	S																					T										T	T	T	T	S			T	T			S	S	S	S	T							T		S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.
Sequence	E	A	L	E	Y	F	M	K	Q	M	N	D	A	H	H	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T

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PDB structure

FASTA sequence

Hidden Markov model

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