Emaill.a.kelley@imperial.ac.uk
DescriptionQ5H778
DateThu Jan 5 12:37:23 GMT 2012
Unique Job ID64d1a13b67ca8869

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c3giaA_



100.0 18 PDB header:transport protein
Chain: A: PDB Molecule:uncharacterized protein mj0609;
PDBTitle: crystal structure of apct transporter
2c3lrcC_



100.0 17 PDB header:transport protein
Chain: C: PDB Molecule:arginine/agmatine antiporter;
PDBTitle: structure of e. coli adic (p1)
3c2jlnA_



100.0 10 PDB header:membrane protein
Chain: A: PDB Molecule:mhp1;
PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter
4c2xq2A_



99.1 10 PDB header:transport protein
Chain: A: PDB Molecule:sodium/glucose cotransporter;
PDBTitle: structure of the k294a mutant of vsglt
5c3dh4A_



99.1 10 PDB header:transport protein
Chain: A: PDB Molecule:sodium/glucose cotransporter;
PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus
6c2w8aC_



94.6 11 PDB header:membrane protein
Chain: C: PDB Molecule:glycine betaine transporter betp;
PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate
7d2a65a1



91.6 11 Fold:SNF-like
Superfamily:SNF-like
Family:SNF-like
8c3hfxA_



78.7 11 PDB header:transport protein
Chain: A: PDB Molecule:l-carnitine/gamma-butyrobetaine antiporter;
PDBTitle: crystal structure of carnitine transporter
9c3qnqD_



51.3 17 PDB header:membrane protein, transport protein
Chain: D: PDB Molecule:pts system, cellobiose-specific iic component;
PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system
10d1fftb2



46.2 15 Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
11c2kluA_



37.6 12 PDB header:immune system, membrane protein
Chain: A: PDB Molecule:t-cell surface glycoprotein cd4;
PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
12c2kvtA_



11.0 33 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein yaia;
PDBTitle: solution nmr structure of yaia from escherichia eoli. northeast2 structural genomics target er244
13c3le4A_



10.9 27 PDB header:nuclear protein
Chain: A: PDB Molecule:microprocessor complex subunit dgcr8;
PDBTitle: crystal structure of the dgcr8 dimerization domain
14d1qhda2



10.7 32 Fold:Viral protein domain
Superfamily:Viral protein domain
Family:Top domain of virus capsid protein
15c1ujlA_



10.3 0 PDB header:membrane protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h
PDBTitle: solution structure of the herg k+ channel s5-p2 extracellular linker
16c3rkoF_



9.6 12 PDB header:oxidoreductase
Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
17c1zgxB_



9.2 28 PDB header:hydrolase
Chain: B: PDB Molecule:guanyl-specific ribonuclease sa;
PDBTitle: crystal structure of ribonuclease mutant
18c3bcyA_



8.8 17 PDB header:unknown function
Chain: A: PDB Molecule:protein yer067w;
PDBTitle: crystal structure of yer067w
19c2l1nA_



8.5 29 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the protein yp_399305.1
20c2elmA_



8.4 21 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 10th c2h2 zinc finger of human2 zinc finger protein 406
21c2rddB_



not modelled 8.0 22 PDB header:membrane protein/transport protein
Chain: B: PDB Molecule:upf0092 membrane protein yajc;
PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
22c2v6xB_



not modelled 7.8 25 PDB header:protein transport
Chain: B: PDB Molecule:doa4-independent degradation protein 4;
PDBTitle: stractural insight into the interaction between escrt-iii2 and vps4
23d1eg3a3



not modelled 7.6 33 Fold:WW domain-like
Superfamily:WW domain
Family:WW domain
24c3m7bA_



not modelled 7.4 14 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:tellurite resistance protein teha homolog;
PDBTitle: crystal structure of plant slac1 homolog teha
25c2owrD_



not modelled 7.4 17 PDB header:hydrolase
Chain: D: PDB Molecule:uracil-dna glycosylase;
PDBTitle: crystal structure of vaccinia virus uracil-dna glycosylase
26c2wmpB_



not modelled 7.3 29 PDB header:chaperone
Chain: B: PDB Molecule:papg protein;
PDBTitle: structure of the e. coli chaperone papd in complex with the pilin2 domain of the papgii adhesin
27d1p35a_



not modelled 7.3 23 Fold:Baculovirus p35 protein
Superfamily:Baculovirus p35 protein
Family:Baculovirus p35 protein
28c2i6kA_



not modelled 7.2 29 PDB header:isomerase
Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 1;
PDBTitle: crystal structure of human type i ipp isomerase complexed2 with a substrate analog
29d2r6gf1



not modelled 7.2 14 Fold:MalF N-terminal region-like
Superfamily:MalF N-terminal region-like
Family:MalF N-terminal region-like
30d2oara1



not modelled 6.8 10 Fold:Gated mechanosensitive channel
Superfamily:Gated mechanosensitive channel
Family:Gated mechanosensitive channel
31c2gfpA_



not modelled 6.8 6 PDB header:membrane protein
Chain: A: PDB Molecule:multidrug resistance protein d;
PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli
32d2iuba2



not modelled 6.7 5 Fold:Transmembrane helix hairpin
Superfamily:Magnesium transport protein CorA, transmembrane region
Family:Magnesium transport protein CorA, transmembrane region
33c2y69Z_



not modelled 6.7 24 PDB header:electron transport
Chain: Z: PDB Molecule:cytochrome c oxidase polypeptide 8h;
PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular2 oxygen
34c1qo8A_



not modelled 6.6 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:flavocytochrome c3 fumarate reductase;
PDBTitle: the structure of the open conformation of a flavocytochrome2 c3 fumarate reductase
35d1qmha2



not modelled 6.5 23 Fold:IF3-like
Superfamily:EPT/RTPC-like
Family:RNA 3'-terminal phosphate cyclase, RPTC
36c2kncA_



not modelled 6.5 8 PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
37c1qhdA_



not modelled 6.5 32 PDB header:viral protein
Chain: A: PDB Molecule:viral capsid vp6;
PDBTitle: crystal structure of vp6, the major capsid protein of group a2 rotavirus
38c3kz5E_



not modelled 6.5 44 PDB header:dna binding protein
Chain: E: PDB Molecule:protein sopb;
PDBTitle: structure of cdomain
39d1roca_



not modelled 6.4 14 Fold:Immunoglobulin-like beta-sandwich
Superfamily:ASF1-like
Family:ASF1-like
40d1kp6a_



not modelled 6.4 21 Fold:Ferredoxin-like
Superfamily:Killer toxin KP6 alpha-subunit
Family:Killer toxin KP6 alpha-subunit
41d2joza1



not modelled 6.4 15 Fold:Lipocalins
Superfamily:Lipocalins
Family:Retinol binding protein-like
42c3c0fB_



not modelled 6.4 36 PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein af_1514;
PDBTitle: crystal structure of a novel non-pfam protein af1514 from archeoglobus2 fulgidus dsm 4304 solved by s-sad using a cr x-ray source
43c2l9uA_



not modelled 6.3 32 PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3;
PDBTitle: spatial structure of dimeric erbb3 transmembrane domain
44c1bzkA_



not modelled 6.2 50 PDB header:transport protein
Chain: A: PDB Molecule:protein (band 3 anion transport protein);
PDBTitle: structural studies on the effects of the deletion in the2 red cell anion exchanger (band3, ae1) associated with3 south east asian ovalocytosis.
45c1iijA_



not modelled 6.2 21 PDB header:signaling protein
Chain: A: PDB Molecule:erbb-2 receptor protein-tyrosine kinase;
PDBTitle: solution structure of the neu/erbb-2 membrane spanning2 segment
46c2embA_



not modelled 6.1 36 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 342-2 372) of human zinc finger protein 473
47d1f6ga_



not modelled 6.1 14 Fold:Voltage-gated potassium channels
Superfamily:Voltage-gated potassium channels
Family:Voltage-gated potassium channels
48d2h8pc1



not modelled 6.0 13 Fold:Voltage-gated potassium channels
Superfamily:Voltage-gated potassium channels
Family:Voltage-gated potassium channels
49c3pqvD_



not modelled 5.9 9 PDB header:unknown function
Chain: D: PDB Molecule:rcl1 protein;
PDBTitle: cyclase homolog
50c2k9yB_



not modelled 5.9 17 PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
51c2k9yA_



not modelled 5.9 17 PDB header:transferase
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
52c3nzqB_



not modelled 5.9 11 PDB header:lyase
Chain: B: PDB Molecule:biosynthetic arginine decarboxylase;
PDBTitle: crystal structure of biosynthetic arginine decarboxylase adc (spea)2 from escherichia coli, northeast structural genomics consortium3 target er600
53d2cu9a1



not modelled 5.8 10 Fold:Immunoglobulin-like beta-sandwich
Superfamily:ASF1-like
Family:ASF1-like
54c2xzmO_



not modelled 5.8 12 PDB header:ribosome
Chain: O: PDB Molecule:rps13e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
55c2zxeA_



not modelled 5.8 9 PDB header:hydrolase/transport protein
Chain: A: PDB Molecule:na, k-atpase alpha subunit;
PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
56d1t98a2



not modelled 5.7 14 Fold:STAT-like
Superfamily:MukF C-terminal domain-like
Family:MukF C-terminal domain-like
57d1f8ea_



not modelled 5.5 12 Fold:6-bladed beta-propeller
Superfamily:Sialidases
Family:Sialidases (neuraminidases)
58c3n2oA_



not modelled 5.4 11 PDB header:lyase
Chain: A: PDB Molecule:biosynthetic arginine decarboxylase;
PDBTitle: x-ray crystal structure of arginine decarboxylase complexed with2 arginine from vibrio vulnificus
59c1qmiC_



not modelled 5.4 23 PDB header:rna 3'-terminal phosphate cyclase
Chain: C: PDB Molecule:rna 3'-terminal phosphate cyclase;
PDBTitle: crystal structure of rna 3'-terminal phosphate cyclase, an2 ubiquitous enzyme with unusual topology
60c3imkA_



not modelled 5.4 13 PDB header:metal binding protein
Chain: A: PDB Molecule:putative molybdenum carrier protein;
PDBTitle: crystal structure of putative molybdenum carrier protein (yp_461806.1)2 from syntrophus aciditrophicus sb at 1.45 a resolution
61c1nmbN_



not modelled 5.4 12 PDB header:complex (hydrolase/immunoglobulin)
Chain: N: PDB Molecule:n9 neuraminidase;
PDBTitle: the structure of a complex between the nc10 antibody and influenza2 virus neuraminidase and comparison with the overlapping binding site3 of the nc41 antibody
62c2rmhA_



not modelled 5.4 30 PDB header:hormone
Chain: A: PDB Molecule:urocortin-3;
PDBTitle: human urocortin 3
63d1v54m_



not modelled 5.3 24 Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
Family:Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
64c2d46A_



not modelled 5.3 5 PDB header:metal transport
Chain: A: PDB Molecule:calcium channel, voltage-dependent, beta 4
PDBTitle: solution structure of the human beta4a-a domain
65c1w21D_



not modelled 5.2 3 PDB header:hydrolase
Chain: D: PDB Molecule:neuraminidase;
PDBTitle: structure of neuraminidase from english duck subtype n62 complexed with 30 mm sialic acid (nana, neu5ac), crystal3 soaked for 43 hours at 291 k.
66c2cpbA_



not modelled 5.2 18 PDB header:viral protein
Chain: A: PDB Molecule:m13 major coat protein;
PDBTitle: solution nmr structures of the major coat protein of2 filamentous bacteriophage m13 solubilized in3 dodecylphosphocholine micelles, 25 lowest energy structures
67c2vdaB_



not modelled 5.2 63 PDB header:protein transport
Chain: B: PDB Molecule:maltoporin;
PDBTitle: solution structure of the seca-signal peptide complex