Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1w21D_

Fold library idPDB HeaderMoleculeTitle
c1w21D_PDB header: hydrolaseChain: D: PDB Molecule: neuraminidase;PDBTitle: structure of neuraminidase from english duck subtype n62 complexed with 30 mm sialic acid (nana, neu5ac), crystal3 soaked for 43 hours at 291 k.


Added to library: Tue Mar 16 12:35:20 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RTFLNLTKPLCEVNSWHILSKDNAIRIGEDAHILVTREPYLSCDPQGCRMFALSQGTTLRGRHANGTIHD
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)






S
B


S

TTS

TTSSSGGGTTTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence RSPFRALISWEMGQAPSPYNTRVECIGWSSTSCHDGMSRMSICMSGPNNNASAVVWYGGRPITEIPSWAG
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)

TT
TTS


TTS
SS
SSSS
TTS
TT
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NILRTQESECVCHKGVCPVVMTDGPANNRAATKIIYFKEGKIQKIEELAGNAQHIEECSCYGAGGVIKCI
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) S

B

SS



BTTBS
SSS

TT

SS



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence CRDNWKGANRPVITIDPEMMTHTSKYLCSKVLTDTSRPNDPTNGNCDAPITGGSPDPGVKGFAFLDGENS
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)
SSS
SS
TTTT


SS

SSS




SS

SSS




SS








TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence WLGRTISKDSRSGYEMLKVPNAETDIQSGPISNQVIVNNQNWSGYSGAFIDYWANKECFNPCFYVELIRG
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
SSSSSS
TTTTT
TT


S



TTSSSSSB
 .........360.........370.........380.........
Sequence RPKESSVLWTSNSIVALCGSKKRLGSWSWHDGAEIIYFE
Predicted secondary structure




























SS confidence






































Known secondary structure (DSSP) TTT
TTSS
SS











GGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D