PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2owrD_

Fold library id	PDB Header	Molecule	Title
c2owrD_	PDB header: hydrolase	Chain: D: PDB Molecule: uracil-dna glycosylase;	PDBTitle: crystal structure of vaccinia virus uracil-dna glycosylase

Links to external resources
Added to library: Tue Mar 16 12:57:25 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M N S V T V S H A P Y T I T Y H N D W E P V M S Q L V E F Y N E V A S W L L R D E T S P I P D K F F I Q L K Q P L R N K R V C V C G I D P Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
G G G T T T T S
S
G G G T T G G G G S
S T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P K D G T G V P F E S P N F T K K S I K E I A S S I S R L T G V I D Y K G Y N L N I I D G V I P W N Y Y L S C K L G E T K S H A I Y W D K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S T T
T T S
S
G G G S T T S S S
T T
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S K L L L Q H I T K H V S V L Y C L G K T D F S N I R A K L E S P V T T I V G Y H P A A R D R Q F E K D E I I N V L L E L D N K A P I N W A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
T T T S S S T T G G G T
S
S S S S S
S
T T S
G G

. . . . .

Sequence Q G F I Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	N	S	V	T	V	S	H	A	P	Y	T	I	T	Y	H	N	D	W	E	P	V	M	S	Q	L	V	E	F	Y	N	E	V	A	S	W	L	L	R	D	E	T	S	P	I	P	D	K	F	F	I	Q	L	K	Q	P	L	R	N	K	R	V	C	V	C	G	I	D	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S							G	G	G													T	T					T	T	S				S		G	G	G	T	T	G	G	G	G	S		S	T	T								S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	K	D	G	T	G	V	P	F	E	S	P	N	F	T	K	K	S	I	K	E	I	A	S	S	I	S	R	L	T	G	V	I	D	Y	K	G	Y	N	L	N	I	I	D	G	V	I	P	W	N	Y	Y	L	S	C	K	L	G	E	T	K	S	H	A	I	Y	W	D	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S				S	S	T	T			T	T	S																						S				G	G	G	S	T	T						S	S	S				T	T		T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	K	L	L	L	Q	H	I	T	K	H	V	S	V	L	Y	C	L	G	K	T	D	F	S	N	I	R	A	K	L	E	S	P	V	T	T	I	V	G	Y	H	P	A	A	R	D	R	Q	F	E	K	D	E	I	I	N	V	L	L	E	L	D	N	K	A	P	I	N	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T		S							T	T	T	S	S	S	T	T	G	G	G	T			S								S	S	S	S	S		S														T	T	S					G	G
	.	.	.	.	.
Sequence	Q	G	F	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G