Email l.a.kelley@imperial.ac.uk Description P76216 Date Thu Jan 5 12:20:40 GMT 2012 Unique Job ID 5d0247ce2fe6dce9

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ynha1 100.0 100 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Succinylarginine dihydrolase-like 2 d1h70a_ 97.0 19 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Dimethylarginine dimethylaminohydrolase DDAH 3 d1bwda_ 90.3 12 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Amidinotransferase 4 c3dydB_ 81.8 18 PDB header:transferase Chain: B: PDB Molecule:tyrosine aminotransferase; PDBTitle: human tyrosine aminotransferase 5 d1jdwa_ 76.1 15 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Amidinotransferase 6 c1jdwA_ 76.1 15 PDB header:transferase Chain: A: PDB Molecule:l-arginine\:glycine amidinotransferase; PDBTitle: crystal structure and mechanism of l-arginine: glycine2 amidinotransferase: a mitochondrial enzyme involved in3 creatine biosynthesis 7 c2ci6A_ 75.9 19 PDB header:hydrolase Chain: A: PDB Molecule:ng, ng-dimethylarginine dimethylaminohydrolase 1; PDBTitle: crystal structure of dimethylarginine2 dimethylaminohydrolase i bound with zinc low ph 8 d1wsta1 66.4 12 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 9 c8jdwA_ 64.6 15 PDB header:transferase Chain: A: PDB Molecule:protein (l-arginine:glycine amidinotransferase); PDBTitle: crystal structure of human l-arginine:glycine2 amidinotransferase in complex with l-alanine 10 c3i4aA_ 61.2 18 PDB header:hydrolase Chain: A: PDB Molecule:n(g),n(g)-dimethylarginine dimethylaminohydrolase PDBTitle: crystal structure of dimethylarginine2 dimethylaminohydrolase-1 (ddah-1) in complex with n5-(1-3 iminopropyl)-l-ornithine 11 d1bl0a1 53.8 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 12 c3pdxA_ 53.4 19 PDB header:transferase Chain: A: PDB Molecule:tyrosine aminotransferase; PDBTitle: crystal structural of mouse tyrosine aminotransferase 13 d1d5ya1 43.5 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 14 c3fkdC_ 41.8 15 PDB header:lyase Chain: C: PDB Molecule:l-threonine-o-3-phosphate decarboxylase; PDBTitle: the crystal structure of l-threonine-o-3-phosphate2 decarboxylase from porphyromonas gingivalis 15 c3p1tB_ 37.3 13 PDB header:transferase Chain: B: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a putative aminotransferase (bpsl1724) from2 burkholderia pseudomallei k96243 at 2.60 a resolution 16 c3ctzA_ 36.7 19 PDB header:hydrolase Chain: A: PDB Molecule:xaa-pro aminopeptidase 1; PDBTitle: structure of human cytosolic x-prolyl aminopeptidase 17 d2bo9b1 32.8 25 Fold:Cystatin-like Superfamily:Cystatin/monellin Family:Latexin-like 18 c3eibB_ 31.2 12 PDB header:transferase Chain: B: PDB Molecule:ll-diaminopimelate aminotransferase; PDBTitle: crystal structure of k270n variant of ll-diaminopimelate2 aminotransferase from arabidopsis thaliana 19 c3oouA_ 30.0 4 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2118 protein; PDBTitle: the structure of a protein with unkown function from listeria innocua 20 c3mklB_ 28.6 11 PDB header:transcription regulator Chain: B: PDB Molecule:hth-type transcriptional regulator gadx; PDBTitle: crystal structure of dna-binding transcriptional dual regulator from2 escherichia coli k-12 21 d1rxxa_ not modelled 28.3 24 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Arginine deiminase 22 d1fg7a_ not modelled 28.0 30 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 23 c1bl0A_ not modelled 27.8 12 PDB header:transcription/dna Chain: A: PDB Molecule:protein (multiple antibiotic resistance protein); PDBTitle: multiple antibiotic resistance protein (mara)/dna complex 24 c3t18D_ not modelled 26.0 16 PDB header:transferase Chain: D: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of aminotransferase from anaerococcus prevotii dsm2 20548. 25 c3g7qA_ not modelled 24.7 12 PDB header:transferase Chain: A: PDB Molecule:valine-pyruvate aminotransferase; PDBTitle: crystal structure of valine-pyruvate aminotransferase avta2 (np_462565.1) from salmonella typhimurium lt2 at 1.80 a resolution 26 c2k9sA_ not modelled 22.1 15 PDB header:transcription Chain: A: PDB Molecule:arabinose operon regulatory protein; PDBTitle: solution structure of dna binding domain of e. coli arac 27 c2of5K_ not modelled 21.7 15 PDB header:apoptosis Chain: K: PDB Molecule:leucine-rich repeat and death domain-containing PDBTitle: oligomeric death domain complex 28 c3hdoB_ not modelled 21.6 19 PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a histidinol-phosphate aminotransferase from2 geobacter metallireducens 29 c3oioA_ not modelled 21.0 11 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (arac-type dna-binding domain- PDBTitle: crystal structure of transcriptional regulator (arac-type dna-binding2 domain-containing proteins) from chromobacterium violaceum 30 d2v7fa1 not modelled 19.0 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Rps19E-like 31 d2vnud3 not modelled 18.5 33 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 32 c2bo9B_ not modelled 18.4 25 PDB header:hydrolase Chain: B: PDB Molecule:human latexin; PDBTitle: human carboxypeptidase a4 in complex with human latexin. 33 d2foka1 not modelled 18.4 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Restriction endonuclease FokI, N-terminal (recognition) domain 34 c3e4wB_ not modelled 17.6 28 PDB header:oxidoreductase Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a 33kda catalase-related protein from2 mycobacterium avium subsp. paratuberculosis. p2(1)2(1)2(1) crystal3 form. 35 c3nzlA_ not modelled 17.4 35 PDB header:transcription Chain: A: PDB Molecule:dna-binding protein satb1; PDBTitle: crystal structure of the n-terminal domain of dna-binding protein2 satb1 from homo sapiens, northeast structural genomics consortium3 target hr4435b 36 c3gbgA_ not modelled 17.3 12 PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 37 c3iz6S_ not modelled 16.5 20 PDB header:ribosome Chain: S: PDB Molecule:40s ribosomal protein s19 (s19e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 38 c2zc0C_ not modelled 15.8 17 PDB header:transferase Chain: C: PDB Molecule:alanine glyoxylate transaminase; PDBTitle: crystal structure of an archaeal alanine:glyoxylate aminotransferase 39 d1s9ra_ not modelled 15.5 12 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Arginine deiminase 40 d1lc5a_ not modelled 15.5 24 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 41 d1x0ma1 not modelled 14.7 9 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 42 c3jyvT_ not modelled 14.6 20 PDB header:ribosome Chain: T: PDB Molecule:s19e protein; PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution 43 d1vp4a_ not modelled 14.6 16 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 44 c3mn2B_ not modelled 14.5 8 PDB header:transcription regulator Chain: B: PDB Molecule:probable arac family transcriptional regulator; PDBTitle: the crystal structure of a probable arac family transcriptional2 regulator from rhodopseudomonas palustris cga009 45 c3cq6E_ not modelled 13.9 17 PDB header:transferase Chain: E: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: histidinol-phosphate aminotransferase from corynebacterium2 glutamicum holo-form (plp covalently bound ) 46 c3ismA_ not modelled 13.6 19 PDB header:hydrolase inhibitor/hydrolase Chain: A: PDB Molecule:cg8862; PDBTitle: crystal structure of the endog/endogi complex: mechanism of endog2 inhibition 47 c3getA_ not modelled 13.4 22 PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (np_281508.1) from campylobacter jejuni at 2.01 a resolution 48 c3ftbA_ not modelled 13.2 10 PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of the histidinol-phosphate2 aminotransferase from clostridium acetobutylicum 49 c3aiiA_ not modelled 12.7 26 PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: archaeal non-discriminating glutamyl-trna synthetase from2 methanothermobacter thermautotrophicus 50 c3by0B_ not modelled 12.5 18 PDB header:ligand binding protein Chain: B: PDB Molecule:neutrophil gelatinase-associated lipocalin; PDBTitle: crystal structure of siderocalin (ngal, lipocalin 2) w79a-r81a2 complexed with ferric enterobactin 51 c3lsgD_ not modelled 12.4 18 PDB header:transcription regulator Chain: D: PDB Molecule:two-component response regulator yesn; PDBTitle: the crystal structure of the c-terminal domain of the two-2 component response regulator yesn from fusobacterium3 nucleatum subsp. nucleatum atcc 25586 52 c3ly1C_ not modelled 12.0 16 PDB header:transferase Chain: C: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a3 resolution 53 c3ezsB_ not modelled 11.8 13 PDB header:transferase Chain: B: PDB Molecule:aminotransferase aspb; PDBTitle: crystal structure of aminotransferase aspb (np_207418.1) from2 helicobacter pylori 26695 at 2.19 a resolution 54 d1bw0a_ not modelled 11.7 16 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 55 c3s1sA_ not modelled 11.4 10 PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi 56 c2douA_ not modelled 10.9 18 PDB header:transferase Chain: A: PDB Molecule:probable n-succinyldiaminopimelate aminotransferase; PDBTitle: probable n-succinyldiaminopimelate aminotransferase (ttha0342) from2 thermus thermophilus hb8 57 c2re3A_ not modelled 10.6 45 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a duf1285 family protein (spo_0140) from2 silicibacter pomeroyi dss-3 at 2.50 a resolution 58 c2xznT_ not modelled 10.5 17 PDB header:ribosome Chain: T: PDB Molecule:rps19e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 59 c2yx5A_ not modelled 10.1 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0062 protein mj1593; PDBTitle: crystal structure of methanocaldococcus jannaschii purs, one of the2 subunits of formylglycinamide ribonucleotide amidotransferase in the3 purine biosynthetic pathway 60 d1n26a1 not modelled 10.0 35 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains 61 d2nwva1 not modelled 9.9 39 Fold:XisI-like Superfamily:XisI-like Family:XisI-like 62 d1v30a_ not modelled 9.8 43 Fold:Gamma-glutamyl cyclotransferase-like Superfamily:Gamma-glutamyl cyclotransferase-like Family:Gamma-glutamyl cyclotransferase-like 63 c2e12B_ not modelled 9.7 50 PDB header:translation Chain: B: PDB Molecule:hypothetical protein xcc3642; PDBTitle: the crystal structure of xc5848 from xanthomonas campestris2 adopting a novel variant of sm-like motif 64 d1xhsa_ not modelled 9.6 71 Fold:Gamma-glutamyl cyclotransferase-like Superfamily:Gamma-glutamyl cyclotransferase-like Family:Gamma-glutamyl cyclotransferase-like 65 c1d5yD_ not modelled 9.5 15 PDB header:transcription/dna Chain: D: PDB Molecule:rob transcription factor; PDBTitle: crystal structure of the e. coli rob transcription factor2 in complex with dna 66 c2wo3B_ not modelled 9.4 40 PDB header:transferase/signaling protein Chain: B: PDB Molecule:ephrin-a2; PDBTitle: crystal structure of the epha4-ephrina2 complex 67 c3ke2A_ not modelled 9.4 19 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein yp_928783.1; PDBTitle: crystal structure of a duf2131 family protein (sama_2911) from2 shewanella amazonensis sb2b at 2.50 a resolution 68 c2k6lA_ not modelled 9.0 50 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the solution structure of xacb0070 from xanthonomas2 axonopodis pv citri reveals this new protein is a member of3 the rhh family of transcriptional repressors 69 c3a0hL_ not modelled 8.8 67 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex 70 c3a0hl_ not modelled 8.8 67 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex 71 d2nlva1 not modelled 8.8 28 Fold:XisI-like Superfamily:XisI-like Family:XisI-like 72 c3if2B_ not modelled 8.7 14 PDB header:transferase Chain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of putative amino-acid aminotransferase2 (yp_265399.1) from psychrobacter arcticum 273-4 at 2.50 a resolution 73 c3arcL_ not modelled 8.6 67 PDB header:electron transport, photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution 74 c1s5lL_ not modelled 8.6 67 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: architecture of the photosynthetic oxygen evolving center 75 c3prrL_ not modelled 8.6 67 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer 76 c2axtl_ not modelled 8.6 67 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus 77 c3a0bL_ not modelled 8.6 67 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex 78 c3a0bl_ not modelled 8.6 67 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex 79 c3bz1L_ not modelled 8.6 67 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 12 of 2). this file contains first monomer of psii dimer 80 d2axtl1 not modelled 8.6 67 Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein L, PsbL Family:PsbL-like 81 c3bz2L_ not modelled 8.6 67 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 22 of 2). this file contains second monomer of psii dimer 82 c3prqL_ not modelled 8.6 67 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer 83 c2axtL_ not modelled 8.6 67 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus 84 c3kziL_ not modelled 8.6 67 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii 85 c1s5ll_ not modelled 8.6 67 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: architecture of the photosynthetic oxygen evolving center 86 c2e58D_ not modelled 8.5 22 PDB header:transferase Chain: D: PDB Molecule:mnmc2; PDBTitle: crystal structure of mnmc2 from aquifex aeolicus 87 d1j32a_ not modelled 8.2 15 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 88 c2euzA_ not modelled 7.9 29 PDB header:cell cycle/dna Chain: A: PDB Molecule:ndt80 protein; PDBTitle: structure of a ndt80-dna complex (mse mutant mc5t) 89 d1mnna_ not modelled 7.6 29 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:DNA-binding domain from NDT80 90 d1dqna_ not modelled 7.5 32 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 91 c1wr1B_ not modelled 7.5 29 PDB header:signaling protein Chain: B: PDB Molecule:ubiquitin-like protein dsk2; PDBTitle: the complex sturcture of dsk2p uba with ubiquitin 92 d1xi9a_ not modelled 7.2 11 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 93 d2p97a1 not modelled 7.0 15 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:Ava3068-like 94 d1smye_ not modelled 6.9 41 Fold:RPB6/omega subunit-like Superfamily:RPB6/omega subunit-like Family:RNA polymerase omega subunit 95 c3ol4B_ not modelled 6.7 15 PDB header:unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c 96 c2xstA_ not modelled 6.6 13 PDB header:transport protein Chain: A: PDB Molecule:lipocalin 15; PDBTitle: crystal structure of the human lipocalin 15 97 d1dxha2 not modelled 6.6 8 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 98 d1lfpa_ not modelled 6.5 16 Fold:YebC-like Superfamily:YebC-like Family:YebC-like 99 d1gg4a3 not modelled 6.4 9 Fold:MurF and HprK N-domain-like Superfamily:MurE/MurF N-terminal domain Family:MurE/MurF N-terminal domain