PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3gbgA_

Fold library id	PDB Header	Molecule	Title
c3gbgA_	PDB header: transcription regulator	Chain: A: PDB Molecule: tcp pilus virulence regulatory protein;	PDBTitle: crystal structure of toxt from vibrio cholerae o395

Links to external resources
Added to library: Sat Aug 28 18:26:52 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K K S F Q T N V Y R M S K F D T Y I F N N L Y I N D Y K M F W I D S G I A K L I D K N C L V S Y E I N S S S I I L L K K N S I Q R F S L T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S S
S S S
T T T T
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L S D E N I N V S V I T I S D S F I R S L K S Y I L G N K D L L L W N C E H N D I A V L S E V V N G F R E I N Y S D E F L K V F F S G F F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S T T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K V E K K Y N S I F I T D D L D A M E K I S C L V K S D I T R N W R W A D I C G E L R T N R M I L K K E L E S R G V K F R E L I N S I R I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S S S
S S
T T
T T T S
T
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260

Sequence Y S I S L M K T G E F K I K Q I A Y Q S G F A S V S Y F S T V F K S T M N V A P S E Y L F M L T G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S
S S
T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	K	S	F	Q	T	N	V	Y	R	M	S	K	F	D	T	Y	I	F	N	N	L	Y	I	N	D	Y	K	M	F	W	I	D	S	G	I	A	K	L	I	D	K	N	C	L	V	S	Y	E	I	N	S	S	S	I	I	L	L	K	K	N	S	I	Q	R	F	S	L	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T										T	T											S	S							S	S	S							T	T	T	T							T	T							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	D	E	N	I	N	V	S	V	I	T	I	S	D	S	F	I	R	S	L	K	S	Y	I	L	G	N	K	D	L	L	L	W	N	C	E	H	N	D	I	A	V	L	S	E	V	V	N	G	F	R	E	I	N	Y	S	D	E	F	L	K	V	F	F	S	G	F	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																																		S	S										T	T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	V	E	K	K	Y	N	S	I	F	I	T	D	D	L	D	A	M	E	K	I	S	C	L	V	K	S	D	I	T	R	N	W	R	W	A	D	I	C	G	E	L	R	T	N	R	M	I	L	K	K	E	L	E	S	R	G	V	K	F	R	E	L	I	N	S	I	R	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S	S	S		S	S			T	T													T	T	T	S												T												T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Sequence	Y	S	I	S	L	M	K	T	G	E	F	K	I	K	Q	I	A	Y	Q	S	G	F	A	S	V	S	Y	F	S	T	V	F	K	S	T	M	N	V	A	P	S	E	Y	L	F	M	L	T	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T											T	T		S														S	S									T	S