Email l.a.kelley@imperial.ac.uk Description P0AAV8 Date Thu Jan 5 11:13:57 GMT 2012 Unique Job ID 5ce8036e27985dc6

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3g7kD_ 100.0 38 PDB header:isomerase Chain: D: PDB Molecule:3-methylitaconate isomerase; PDBTitle: crystal structure of methylitaconate-delta-isomerase 2 c2pw0A_ 100.0 39 PDB header:unknown function Chain: A: PDB Molecule:prpf methylaconitate isomerase; PDBTitle: crystal structure of trans-aconitate bound to methylaconitate2 isomerase prpf from shewanella oneidensis 3 d2h9fa1 100.0 42 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PA0793-like 4 d2h9fa2 100.0 30 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PA0793-like 5 c1w62B_ 99.4 18 PDB header:racemase Chain: B: PDB Molecule:b-cell mitogen; PDBTitle: proline racemase in complex with one molecule of pyrrole-2-2 carboxylic acid (hemi form) 6 d1tm0a_ 98.5 26 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Proline racemase 7 c2gkjA_ 98.4 16 PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase in complex2 with an irreversible inhibitor dl-azidap 8 c3ednB_ 98.1 18 PDB header:biosynthetic protein Chain: B: PDB Molecule:phenazine biosynthesis protein, phzf family; PDBTitle: crystal structure of the bacillus anthracis phenazine2 biosynthesis protein, phzf family 9 c3ekmE_ 98.0 16 PDB header:isomerase Chain: E: PDB Molecule:diaminopimelate epimerase, chloroplastic; PDBTitle: crystal structure of diaminopimelate epimerase form2 arabidopsis thaliana in complex with irreversible inhibitor3 dl-azidap 10 c1ym5A_ 97.4 13 PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical 32.6 kda protein in dap2-slt2 PDBTitle: crystal structure of yhi9, the yeast member of the2 phenazine biosynthesis phzf enzyme superfamily. 11 d1xuba1 97.3 18 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 12 c1u1wA_ 97.2 18 PDB header:isomerase, lyase Chain: A: PDB Molecule:phenazine biosynthesis protein phzf; PDBTitle: structure and function of phenazine-biosynthesis protein phzf from2 pseudomonas fluorescens 2-79 13 d1qy9a1 96.4 18 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 14 d1s7ja_ 95.9 13 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 15 c1qy9B_ 95.6 16 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein ydde; PDBTitle: crystal structure of e. coli se-met protein ydde 16 d1xuba2 95.2 18 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 17 d1qy9a2 95.2 16 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 18 c3fveA_ 95.1 18 PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase mycobacterium2 tuberculosis dapf 19 c2otnB_ 94.8 21 PDB header:isomerase Chain: B: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of the catalytically active form of diaminopimelate2 epimerase from bacillus anthracis 20 d1u0ka1 93.4 10 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 21 d2gkea1 not modelled 93.3 17 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Diaminopimelate epimerase 22 d2gkea2 not modelled 90.2 16 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Diaminopimelate epimerase 23 c2azpA_ not modelled 87.6 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pa1268; PDBTitle: crystal structure of pa1268 solved by sulfur sad 24 c1u0kA_ not modelled 83.8 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gene product pa4716; PDBTitle: the structure of a predicted epimerase pa4716 from pseudomonas2 aeruginosa 25 c1pyuD_ not modelled 61.1 21 PDB header:lyase Chain: D: PDB Molecule:aspartate 1-decarboxylase alfa chain; PDBTitle: processed aspartate decarboxylase mutant with ser25 mutated to cys 26 c3ougA_ not modelled 58.5 36 PDB header:lyase Chain: A: PDB Molecule:aspartate 1-decarboxylase; PDBTitle: crystal structure of cleaved l-aspartate-alpha-decarboxylase from2 francisella tularensis 27 c1vc3B_ not modelled 57.5 25 PDB header:lyase Chain: B: PDB Molecule:l-aspartate-alpha-decarboxylase heavy chain; PDBTitle: crystal structure of l-aspartate-alpha-decarboxylase 28 c1pt1B_ not modelled 56.1 21 PDB header:lyase Chain: B: PDB Molecule:aspartate 1-decarboxylase; PDBTitle: unprocessed pyruvoyl dependent aspartate decarboxylase with histidine2 11 mutated to alanine 29 d1ppya_ not modelled 55.7 21 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Pyruvoyl dependent aspartate decarboxylase, ADC 30 c2c45F_ not modelled 51.5 32 PDB header:lyase Chain: F: PDB Molecule:aspartate 1-decarboxylase precursor; PDBTitle: native precursor of pyruvoyl dependent aspartate2 decarboxylase 31 d1bk8a_ not modelled 39.2 31 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Scorpion toxin-like Family:Plant defensins 32 d1yq2a1 not modelled 36.4 13 Fold:Immunoglobulin-like beta-sandwich Superfamily:beta-Galactosidase/glucuronidase domain Family:beta-Galactosidase/glucuronidase domain 33 d1kl7a_ not modelled 25.5 44 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 34 d1jz8a2 not modelled 25.1 12 Fold:Immunoglobulin-like beta-sandwich Superfamily:beta-Galactosidase/glucuronidase domain Family:beta-Galactosidase/glucuronidase domain 35 d1h6ua1 not modelled 24.7 32 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Internalin Ig-like domain 36 d2omza1 not modelled 23.6 26 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Internalin Ig-like domain 37 c3opwA_ not modelled 21.7 17 PDB header:oxidoreductase Chain: A: PDB Molecule:dna damage-responsive transcriptional repressor rph1; PDBTitle: crystal structure of the rph1 catalytic core 38 d1h6ta1 not modelled 21.2 21 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Internalin Ig-like domain 39 c2wh7A_ not modelled 17.5 36 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronidase-phage associated; PDBTitle: the partial structure of a group a streptpcoccal phage-2 encoded tail fibre hyaluronate lyase hylp2 40 d1w5sa1 not modelled 16.7 46 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Helicase DNA-binding domain 41 d1xhja_ not modelled 14.3 18 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:NifU C-terminal domain-like 42 d1ayja_ not modelled 13.8 23 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Scorpion toxin-like Family:Plant defensins 43 c4proD_ not modelled 12.8 22 PDB header:serine protease Chain: D: PDB Molecule:alpha-lytic protease; PDBTitle: alpha-lytic protease complexed with pro region 44 d1yuaa1 not modelled 12.7 29 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Prokaryotic DNA topoisomerase I, a C-terminal fragment 45 d1xpma2 not modelled 12.4 27 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 46 c2qj8B_ not modelled 12.4 18 PDB header:hydrolase Chain: B: PDB Molecule:mlr6093 protein; PDBTitle: crystal structure of an aspartoacylase family protein (mlr6093) from2 mesorhizobium loti maff303099 at 2.00 a resolution 47 d1ee0a2 not modelled 12.2 36 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 48 d1u0ka2 not modelled 12.0 23 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 49 c1yuaA_ not modelled 11.1 29 PDB header:dna binding protein Chain: A: PDB Molecule:topoisomerase i; PDBTitle: c-terminal domain of escherichia coli topoisomerase i 50 c3tsyA_ not modelled 11.0 31 PDB header:ligase, transferase Chain: A: PDB Molecule:fusion protein 4-coumarate--coa ligase 1, resveratrol PDBTitle: 4-coumaroyl-coa ligase::stilbene synthase fusion protein 51 c3muwU_ not modelled 10.9 15 PDB header:virus Chain: U: PDB Molecule:structural polyprotein; PDBTitle: pseudo-atomic structure of the e2-e1 protein shell in sindbis virus 52 d1bi5a2 not modelled 10.3 36 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 53 d1u0ua2 not modelled 10.3 36 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 54 d1xafa_ not modelled 9.7 20 Fold:CNF1/YfiH-like putative cysteine hydrolases Superfamily:CNF1/YfiH-like putative cysteine hydrolases Family:YfiH-like 55 d1gpqa_ not modelled 9.1 36 Fold:Inhibitor of vertebrate lysozyme, Ivy Superfamily:Inhibitor of vertebrate lysozyme, Ivy Family:Inhibitor of vertebrate lysozyme, Ivy 56 d1tbxa_ not modelled 8.9 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:F93-like 57 d2b59b2 not modelled 8.5 33 Fold:Prealbumin-like Superfamily:Carboxypeptidase regulatory domain-like Family:Pre-dockerin domain 58 c2klxA_ not modelled 8.5 18 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin; PDBTitle: solution structure of glutaredoxin from bartonella henselae str.2 houston 59 c2bs5A_ not modelled 8.2 29 PDB header:sugar binding protein Chain: A: PDB Molecule:fucose-binding lectin protein; PDBTitle: lectin from ralstonia solanacearum complexed with 2-2 fucosyllactose 60 c1uheA_ not modelled 8.0 25 PDB header:lyase Chain: A: PDB Molecule:aspartate 1-decarboxylase alpha chain; PDBTitle: crystal structure of aspartate decarboxylase, isoaspargine complex 61 c3a5iB_ not modelled 7.6 37 PDB header:protein transport Chain: B: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: structure of the cytoplasmic domain of flha 62 d1rv9a_ not modelled 7.5 20 Fold:CNF1/YfiH-like putative cysteine hydrolases Superfamily:CNF1/YfiH-like putative cysteine hydrolases Family:YfiH-like 63 c3mixA_ not modelled 7.5 45 PDB header:protein transport Chain: A: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: crystal structure of the cytosolic domain of b. subtilis flha 64 c2d3mA_ not modelled 7.1 25 PDB header:transferase Chain: A: PDB Molecule:pentaketide chromone synthase; PDBTitle: pentaketide chromone synthase complexed with coenzyme a 65 c1txtB_ not modelled 7.0 27 PDB header:lyase Chain: B: PDB Molecule:3-hydroxy-3-methylglutaryl-coa synthase; PDBTitle: staphylococcus aureus 3-hydroxy-3-methylglutaryl-coa2 synthase 66 d1gmia_ not modelled 6.8 11 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:PLC-like (P variant) 67 d2ckca1 not modelled 6.6 35 Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like 68 c2ckcA_ not modelled 6.6 35 PDB header:hydrolase Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 7; PDBTitle: solution structures of the brk domains of the human chromo2 helicase domain 7 and 8, reveals structural similarity3 with gyf domain suggesting a role in protein interaction 69 c3o6xC_ not modelled 6.6 20 PDB header:ligase Chain: C: PDB Molecule:glutamine synthetase; PDBTitle: crystal structure of the type iii glutamine synthetase from2 bacteroides fragilis 70 d1ueba1 not modelled 6.3 19 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 71 d1t8ha_ not modelled 6.2 25 Fold:CNF1/YfiH-like putative cysteine hydrolases Superfamily:CNF1/YfiH-like putative cysteine hydrolases Family:YfiH-like 72 d1u0ma2 not modelled 6.2 31 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 73 c2ht9A_ not modelled 6.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin-2; PDBTitle: the structure of dimeric human glutaredoxin 2 74 d2yvxa3 not modelled 5.9 19 Fold:MgtE membrane domain-like Superfamily:MgtE membrane domain-like Family:MgtE membrane domain-like 75 c3brcA_ not modelled 5.9 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein of unknown function; PDBTitle: crystal structure of a conserved protein of unknown function from2 methanobacterium thermoautotrophicum 76 c2xfbI_ not modelled 5.9 20 PDB header:virus Chain: I: PDB Molecule:e2 envelope glycoprotein; PDBTitle: the chikungunya e1 e2 envelope glycoprotein complex fit into2 the sindbis virus cryo-em map 77 c2zunB_ not modelled 5.9 28 PDB header:hydrolase Chain: B: PDB Molecule:458aa long hypothetical endo-1,4-beta-glucanase; PDBTitle: functional analysis of hyperthermophilic endocellulase from2 the archaeon pyrococcus horikoshii 78 d2v0ea1 not modelled 5.8 35 Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like 79 c3izcG_ not modelled 5.8 17 PDB header:ribosome Chain: G: PDB Molecule:60s ribosomal protein rpl6 (l6e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 80 c3n43B_ not modelled 5.8 20 PDB header:viral protein Chain: B: PDB Molecule:e2 envelope glycoprotein; PDBTitle: crystal structures of the mature envelope glycoprotein complex2 (trypsin cleavage) of chikungunya virus. 81 c3n40P_ not modelled 5.7 18 PDB header:viral protein Chain: P: PDB Molecule:p62 envelope glycoprotein; PDBTitle: crystal structure of the immature envelope glycoprotein complex of2 chikungunya virus. 82 d1rw0a_ not modelled 5.5 23 Fold:CNF1/YfiH-like putative cysteine hydrolases Superfamily:CNF1/YfiH-like putative cysteine hydrolases Family:YfiH-like 83 d1b24a2 not modelled 5.3 43 Fold:Homing endonuclease-like Superfamily:Homing endonucleases Family:Group I mobile intron endonuclease 84 d1a77a1 not modelled 5.2 23 Fold:SAM domain-like Superfamily:5' to 3' exonuclease, C-terminal subdomain Family:5' to 3' exonuclease, C-terminal subdomain 85 c3mydA_ not modelled 5.1 32 PDB header:protein transport Chain: A: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: structure of the cytoplasmic domain of flha from helicobacter pylori 86 c2xm5A_ not modelled 5.1 29 PDB header:transferase Chain: A: PDB Molecule:cloq; PDBTitle: structural and mechanistic analysis of the magnesium-2 independent aromatic prenyltransferase cloq from the3 clorobiocin biosynthetic pathway 87 c2p8uB_ not modelled 5.1 15 PDB header:transferase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa synthase, cytoplasmic; PDBTitle: crystal structure of human 3-hydroxy-3-methylglutaryl coa synthase i 88 c3lehA_ not modelled 5.1 19 PDB header:transferase Chain: A: PDB Molecule:putative hydroxymethylglutaryl-coa synthase; PDBTitle: the crystal structure of smu.943c from streptococcus mutans ua159