Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	V	S	V	P	G	M	P	V	T	L	L	N	M	S	K	N	D	I	Y	K	M	V	S	G	D	K	M	D	V	K	M	N	I	F	Q	R	L	W	E	T	L	R	H	L	F	W	S	D	K	Q	T	E	A	Y	K	L	L	F
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?			?	?	?		?												?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		N	F	V	N	N	Q	T	G	N	I	N	A	S	E	Y	F	T	G	A	I	N	E	N	E	R	E	K	F	I	N	S	L	E	L	F	N	K	L	K	T	C	A	K	N	P	D	E	L	V	A	K	G	N	M	R	W	V	A	Q	T
Secondary structure
SS confidence
Disorder							?	?	?	?	?	?	?	?						?	?				?	?																										?	?								?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		F	G	D	I	E	L	S	V	T	F	F	I	E	K	N	K	I	C	T	Q	T	L	Q	L	H	K	G	Q	G	N	L	G	V	D	L	R	K	A	Y	L	P	G	V	D	M	R	D	C	Y	L	G	K	K	T	M	K	G	S	N	D
Secondary structure
SS confidence
Disorder																									?	?	?	?	?	?	?	?	?			?																		?	?				?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Sequence		I	L	Y	E	R	P	G	W	N	A	N	L	G	V	L	P	R	T	V	L	P	R	T	V	L	T	R	T	V	L	T	W	T	V	L	P
Secondary structure
SS confidence
Disorder																		?				?	?	?	?		?					?			?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3cxb chain A Region: 34 - 102 Aligned: 52 Modelled: 52 Confidence: 96.6% Identity: 23% PDB header:signaling protein Chain: A: PDB Molecule:protein sifa; PDBTitle: crystal structure of sifa and skip Phyre2 PDB 3n90 chain A Region: 152 - 179 Aligned: 28 Modelled: 28 Confidence: 47.0% Identity: 18% PDB header:unknown function Chain: A: PDB Molecule:thylakoid lumenal 15 kda protein 1, chloroplastic; PDBTitle: the 1.7 angstrom resolution crystal structure of at2g44920, a2 pentapeptide repeat protein from arabidopsis thaliana thylakoid3 lumen. Phyre2 PDB 2j8i chain A domain 1 Region: 152 - 215 Aligned: 64 Modelled: 64 Confidence: 43.0% Identity: 20% Fold: Single-stranded right-handed beta-helix Superfamily: Pentapeptide repeat-like Family: Pentapeptide repeats Phyre2 PDB 1v0d chain A Region: 18 - 98 Aligned: 76 Modelled: 81 Confidence: 32.0% Identity: 22% PDB header:hydrolase Chain: A: PDB Molecule:dna fragmentation factor 40 kda subunit; PDBTitle: crystal structure of caspase-activated dnase (cad) Phyre2 PDB 1v0d chain A Region: 18 - 98 Aligned: 76 Modelled: 81 Confidence: 32.0% Identity: 22% Fold: His-Me finger endonucleases Superfamily: His-Me finger endonucleases Family: Caspase-activated DNase, CAD (DffB, DFF40) Phyre2 PDB 2fvk chain A domain 1 Region: 122 - 213 Aligned: 91 Modelled: 92 Confidence: 27.0% Identity: 14% Fold: Composite domain of metallo-dependent hydrolases Superfamily: Composite domain of metallo-dependent hydrolases Family: Hydantoinase (dihydropyrimidinase) Phyre2 PDB 2j8k chain A domain 1 Region: 152 - 179 Aligned: 28 Modelled: 28 Confidence: 25.0% Identity: 29% Fold: Single-stranded right-handed beta-helix Superfamily: Pentapeptide repeat-like Family: Pentapeptide repeats Phyre2 PDB 2j8i chain B Region: 152 - 215 Aligned: 64 Modelled: 64 Confidence: 18.1% Identity: 20% PDB header:toxin Chain: B: PDB Molecule:np275; PDBTitle: structure of np275, a pentapeptide repeat protein from2 nostoc punctiforme Phyre2 PDB 2xtw chain B Region: 152 - 194 Aligned: 43 Modelled: 43 Confidence: 15.9% Identity: 14% PDB header:cell cycle Chain: B: PDB Molecule:qnrb1; PDBTitle: structure of qnrb1 (full length), a plasmid-mediated2 fluoroquinolone resistance protein Phyre2 PDB 2j8k chain A Region: 152 - 179 Aligned: 28 Modelled: 28 Confidence: 15.0% Identity: 29% PDB header:toxin Chain: A: PDB Molecule:np275-np276; PDBTitle: structure of the fusion of np275 and np276, pentapeptide2 repeat proteins from nostoc punctiforme Phyre2 PDB 3du1 chain X Region: 152 - 179 Aligned: 28 Modelled: 28 Confidence: 14.1% Identity: 29% PDB header:structural protein Chain: X: PDB Molecule:all3740 protein; PDBTitle: the 2.0 angstrom resolution crystal structure of hetl, a pentapeptide2 repeat protein involved in heterocyst differentiation regulation from3 the cyanobacterium nostoc sp. strain pcc 7120 Phyre2 PDB 2jx3 chain A Region: 47 - 97 Aligned: 50 Modelled: 51 Confidence: 14.1% Identity: 24% PDB header:dna binding protein Chain: A: PDB Molecule:protein dek; PDBTitle: nmr solution structure of the n-terminal domain of dek Phyre2 PDB 1sox chain B Region: 41 - 71 Aligned: 31 Modelled: 31 Confidence: 13.8% Identity: 13% PDB header:oxidoreductase Chain: B: PDB Molecule:sulfite oxidase; PDBTitle: sulfite oxidase from chicken liver Phyre2 PDB 1zh5 chain A domain 1 Region: 51 - 110 Aligned: 57 Modelled: 60 Confidence: 13.2% Identity: 14% Fold: DNA/RNA-binding 3-helical bundle Superfamily: "Winged helix" DNA-binding domain Family: La domain Phyre2 PDB 1i8n chain A Region: 177 - 211 Aligned: 25 Modelled: 35 Confidence: 13.1% Identity: 48% PDB header:toxin Chain: A: PDB Molecule:anti-platelet protein; PDBTitle: crystal structure of leech anti-platelet protein Phyre2 PDB 1i8n chain A Region: 177 - 211 Aligned: 25 Modelled: 35 Confidence: 13.1% Identity: 48% Fold: Hairpin loop containing domain-like Superfamily: Hairpin loop containing domain-like Family: Anti-platelet protein Phyre2 PDB 2o6w chain A Region: 152 - 179 Aligned: 28 Modelled: 28 Confidence: 12.9% Identity: 18% PDB header:unknown function Chain: A: PDB Molecule:repeat five residue (rfr) protein or PDBTitle: crystal structure of a pentapeptide repeat protein (rfr23)2 from the cyanobacterium cyanothece 51142 Phyre2 PDB 2f3l chain A domain 1 Region: 152 - 200 Aligned: 46 Modelled: 49 Confidence: 11.8% Identity: 24% Fold: Single-stranded right-handed beta-helix Superfamily: Pentapeptide repeat-like Family: Pentapeptide repeats Phyre2 PDB 1tua chain A domain 2 Region: 14 - 42 Aligned: 29 Modelled: 29 Confidence: 11.6% Identity: 10% Fold: Eukaryotic type KH-domain (KH-domain type I) Superfamily: Eukaryotic type KH-domain (KH-domain type I) Family: Eukaryotic type KH-domain (KH-domain type I) Phyre2 PDB 1nh1 chain A Region: 36 - 46 Aligned: 11 Modelled: 11 Confidence: 11.4% Identity: 27% PDB header:avirulence protein Chain: A: PDB Molecule:avirulence b protein; PDBTitle: crystal structure of the type iii effector avrb from2 pseudomonas syringae. Phyre2 1 c3cxbA_ 2 c3n90A_ 3 d2j8ia1 4 c1v0dA_ 5 d1v0da_ 6 d2fvka1 7 d2j8ka1 8 c2j8iB_ 9 c2xtwB_ 10 c2j8kA_ 11 c3du1X_ 12 c2jx3A_ 13 c1soxB_ 14 d1zh5a1 15 c1i8nA_ 16 d1i8na_ 17 c2o6wA_ 18 d2f3la1 19 d1tuaa2 20 c1nh1A_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3cxbA_ 96.6 23 PDB header:signaling protein Chain: A: PDB Molecule:protein sifa; PDBTitle: crystal structure of sifa and skip 2 c3n90A_ 47.0 18 PDB header:unknown function Chain: A: PDB Molecule:thylakoid lumenal 15 kda protein 1, chloroplastic; PDBTitle: the 1.7 angstrom resolution crystal structure of at2g44920, a2 pentapeptide repeat protein from arabidopsis thaliana thylakoid3 lumen. 3 d2j8ia1 43.0 20 Fold:Single-stranded right-handed beta-helix Superfamily:Pentapeptide repeat-like Family:Pentapeptide repeats 4 c1v0dA_ 32.0 22 PDB header:hydrolase Chain: A: PDB Molecule:dna fragmentation factor 40 kda subunit; PDBTitle: crystal structure of caspase-activated dnase (cad) 5 d1v0da_ 32.0 22 Fold:His-Me finger endonucleases Superfamily:His-Me finger endonucleases Family:Caspase-activated DNase, CAD (DffB, DFF40) 6 d2fvka1 27.0 14 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:Hydantoinase (dihydropyrimidinase) 7 d2j8ka1 25.0 29 Fold:Single-stranded right-handed beta-helix Superfamily:Pentapeptide repeat-like Family:Pentapeptide repeats 8 c2j8iB_ 18.1 20 PDB header:toxin Chain: B: PDB Molecule:np275; PDBTitle: structure of np275, a pentapeptide repeat protein from2 nostoc punctiforme 9 c2xtwB_ 15.9 14 PDB header:cell cycle Chain: B: PDB Molecule:qnrb1; PDBTitle: structure of qnrb1 (full length), a plasmid-mediated2 fluoroquinolone resistance protein 10 c2j8kA_ 15.0 29 PDB header:toxin Chain: A: PDB Molecule:np275-np276; PDBTitle: structure of the fusion of np275 and np276, pentapeptide2 repeat proteins from nostoc punctiforme 11 c3du1X_ 14.1 29 PDB header:structural protein Chain: X: PDB Molecule:all3740 protein; PDBTitle: the 2.0 angstrom resolution crystal structure of hetl, a pentapeptide2 repeat protein involved in heterocyst differentiation regulation from3 the cyanobacterium nostoc sp. strain pcc 7120 12 c2jx3A_ 14.1 24 PDB header:dna binding protein Chain: A: PDB Molecule:protein dek; PDBTitle: nmr solution structure of the n-terminal domain of dek 13 c1soxB_ 13.8 13 PDB header:oxidoreductase Chain: B: PDB Molecule:sulfite oxidase; PDBTitle: sulfite oxidase from chicken liver 14 d1zh5a1 13.2 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:La domain 15 c1i8nA_ 13.1 48 PDB header:toxin Chain: A: PDB Molecule:anti-platelet protein; PDBTitle: crystal structure of leech anti-platelet protein 16 d1i8na_ 13.1 48 Fold:Hairpin loop containing domain-like Superfamily:Hairpin loop containing domain-like Family:Anti-platelet protein 17 c2o6wA_ 12.9 18 PDB header:unknown function Chain: A: PDB Molecule:repeat five residue (rfr) protein or PDBTitle: crystal structure of a pentapeptide repeat protein (rfr23)2 from the cyanobacterium cyanothece 51142 18 d2f3la1 11.8 24 Fold:Single-stranded right-handed beta-helix Superfamily:Pentapeptide repeat-like Family:Pentapeptide repeats 19 d1tuaa2 11.6 10 Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I) 20 c1nh1A_ 11.4 27 PDB header:avirulence protein Chain: A: PDB Molecule:avirulence b protein; PDBTitle: crystal structure of the type iii effector avrb from2 pseudomonas syringae. 21 d1nh1a_ not modelled 11.4 27 Fold:Antivirulence factor Superfamily:Antivirulence factor Family:Antivirulence factor 22 c3ia0c_ not modelled 11.3 26 PDB header:structural protein Chain: C: PDB Molecule:ethanolamine utilization protein euts; PDBTitle: ethanolamine utilization microcompartment shell subunit,2 euts-g39v mutant 23 c2g0yA_ not modelled 11.1 18 PDB header:unknown function Chain: A: PDB Molecule:pentapeptide repeat protein; PDBTitle: crystal structure of a lumenal pentapeptide repeat protein from2 cyanothece sp 51142 at 2.3 angstrom resolution. tetragonal crystal3 form 24 c3lo0A_ not modelled 10.9 28 PDB header:hydrolase Chain: A: PDB Molecule:inorganic pyrophosphatase; PDBTitle: crystal structure of inorganic pyrophosphatase from2 ehrlichia chaffeensis 25 c2wknE_ not modelled 10.7 31 PDB header:hydrolase Chain: E: PDB Molecule:formamidase; PDBTitle: gamma lactamase from delftia acidovorans 26 c2wvmA_ not modelled 9.6 53 PDB header:transferase Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase; PDBTitle: h309a mutant of mannosyl-3-phosphoglycerate synthase from2 thermus thermophilus hb27 in complex with3 gdp-alpha-d-mannose and mg(ii) 27 c2xt4B_ not modelled 9.4 14 PDB header:cell cycle Chain: B: PDB Molecule:mcbg-like protein; PDBTitle: structure of the pentapeptide repeat protein albg, a2 resistance factor for the topoisomerase poison albicidin. 28 c3ifuA_ not modelled 9.1 26 PDB header:transcription Chain: A: PDB Molecule:non-structural protein; PDBTitle: the crystal structure of porcine reproductive and2 respiratory syndrome virus (prrsv) leader protease nsp1 29 d1yj5a1 not modelled 9.0 20 Fold:HAD-like Superfamily:HAD-like Family:phosphatase domain of polynucleotide kinase 30 c2xt4A_ not modelled 8.7 11 PDB header:cell cycle Chain: A: PDB Molecule:mcbg-like protein; PDBTitle: structure of the pentapeptide repeat protein albg, a2 resistance factor for the topoisomerase poison albicidin. 31 c3mjjD_ not modelled 8.5 26 PDB header:hydrolase Chain: D: PDB Molecule:predicted acetamidase/formamidase; PDBTitle: crystal structure analysis of a recombinant predicted2 acetamidase/formamidase from the thermophile thermoanaerobacter3 tengcongensis 32 d1isia_ not modelled 8.4 21 Fold:Flavodoxin-like Superfamily:N-(deoxy)ribosyltransferase-like Family:ADP ribosyl cyclase-like 33 d1j2za_ not modelled 8.4 15 Fold:Single-stranded left-handed beta-helix Superfamily:Trimeric LpxA-like enzymes Family:UDP N-acetylglucosamine acyltransferase 34 c2w7zB_ not modelled 8.3 21 PDB header:inhibitor Chain: B: PDB Molecule:pentapeptide repeat family protein; PDBTitle: structure of the pentapeptide repeat protein efsqnr, a dna2 gyrase inhibitor. free amines modified by cyclic3 pentylation with glutaraldehyde. 35 c3t2dA_ not modelled 8.0 41 PDB header:lyase, hydrolase Chain: A: PDB Molecule:fructose-1,6-bisphosphate aldolase/phosphatase; PDBTitle: fructose-1,6-bisphosphate aldolase/phosphatase from thermoproteus2 neutrophilus, fbp-bound form 36 c1jrjA_ not modelled 8.0 26 PDB header:hormone/growth factor Chain: A: PDB Molecule:exendin-4; PDBTitle: solution structure of exendin-4 in 30-vol% trifluoroethanol 37 c3b9eA_ not modelled 7.9 26 PDB header:hydrolase Chain: A: PDB Molecule:chitinase a; PDBTitle: crystal structure of inactive mutant e315m chitinase a from2 vibrio harveyi 38 c3b9tD_ not modelled 7.9 40 PDB header:hydrolase Chain: D: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of predicted acetamidase/formamidase (yp_546212.1)2 from methylobacillus flagellatus kt at 1.58 a resolution 39 c2zu8A_ not modelled 7.6 47 PDB header:transferase Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase; PDBTitle: crystal structure of mannosyl-3-phosphoglycerate synthase2 from pyrococcus horikoshii 40 c3pssB_ not modelled 7.6 17 PDB header:cell cycle Chain: B: PDB Molecule:qnr; PDBTitle: crystal structure of ahqnr, the qnr protein from aeromonas hydrophila2 (p21 crystal form) 41 c2eg9B_ not modelled 7.1 26 PDB header:hydrolase Chain: B: PDB Molecule:adp-ribosyl cyclase 1; PDBTitle: crystal structure of the truncated extracellular domain of2 mouse cd38 42 d2cqka1 not modelled 7.1 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:La domain 43 d1xnta_ not modelled 6.9 27 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:N-terminal domain of xrcc1 44 c1xnaA_ not modelled 6.9 27 PDB header:dna binding protein Chain: A: PDB Molecule:protein (dna-repair protein xrcc1); PDBTitle: nmr solution structure of the single-strand break repair2 protein xrcc1-n-terminal domain 45 d1sura_ not modelled 6.8 16 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:PAPS reductase-like 46 c3n3fB_ not modelled 6.7 14 PDB header:protein binding Chain: B: PDB Molecule:collagen alpha-1(xv) chain; PDBTitle: crystal structure of the human collagen xv trimerization domain: a2 potent trimerizing unit common to multiplexin collagens 47 c2xz2A_ not modelled 6.6 26 PDB header:rna-binding protein Chain: A: PDB Molecule:cstf-50, isoform b; PDBTitle: crystal structure of cstf-50 homodimerization domain 48 c2vbeA_ not modelled 6.6 39 PDB header:viral protein Chain: A: PDB Molecule:tailspike-protein; PDBTitle: tailspike protein of bacteriophage sf6 49 c3cgiD_ not modelled 6.4 50 PDB header:unknown function Chain: D: PDB Molecule:propanediol utilization protein pduu; PDBTitle: crystal structure of the pduu shell protein from the pdu2 microcompartment 50 d1hs5a_ not modelled 6.4 34 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 51 c2goyC_ not modelled 6.4 22 PDB header:oxidoreductase Chain: C: PDB Molecule:adenosine phosphosulfate reductase; PDBTitle: crystal structure of assimilatory adenosine 5'-2 phosphosulfate reductase with bound aps 52 c1d0rA_ not modelled 6.3 26 PDB header:hormone/growth factor Chain: A: PDB Molecule:glucagon-like peptide-1-(7-36)-amide; PDBTitle: solution structure of glucagon-like peptide-1-(7-36)-amide2 in trifluoroethanol/water 53 c2bhlB_ not modelled 6.3 43 PDB header:oxidoreductase (choh(d)-nadp) Chain: B: PDB Molecule:glucose-6-phosphate 1-dehydrogenase; PDBTitle: x-ray structure of human glucose-6-phosphate dehydrogenase2 (deletion variant) complexed with glucose-6-phosphate 54 c1yj5B_ not modelled 6.3 20 PDB header:transferase Chain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme 55 d2a1ja1 not modelled 6.2 17 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 56 c3nb2B_ not modelled 6.1 25 PDB header:ligase Chain: B: PDB Molecule:secreted effector protein; PDBTitle: crystal structure of e. coli o157:h7 effector protein nlel 57 c2j9wB_ not modelled 6.1 19 PDB header:protein transport Chain: B: PDB Molecule:vps28-prov protein; PDBTitle: structural insight into the escrt-i-ii link and its role in2 mvb trafficking 58 d1khia2 not modelled 6.1 36 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 59 d1whra_ not modelled 6.0 14 Fold:IF3-like Superfamily:R3H domain Family:R3H domain 60 d1wvfa1 not modelled 5.9 31 Fold:Ferredoxin-like Superfamily:FAD-linked oxidases, C-terminal domain Family:Vanillyl-alcohol oxidase-like 61 d2f4la1 not modelled 5.8 24 Fold:CUB-like Superfamily:Acetamidase/Formamidase-like Family:Acetamidase/Formamidase-like 62 c3hugJ_ not modelled 5.8 30 PDB header:transcription/membrane protein Chain: J: PDB Molecule:probable conserved membrane protein; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl 63 d1edqa2 not modelled 5.8 25 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Type II chitinase 64 d2bm5a1 not modelled 5.7 4 Fold:Single-stranded right-handed beta-helix Superfamily:Pentapeptide repeat-like Family:Pentapeptide repeats 65 d1mjea2 not modelled 5.7 28 Fold:BRCA2 tower domain Superfamily:BRCA2 tower domain Family:BRCA2 tower domain 66 c2c1tA_ not modelled 5.6 17 PDB header:protein transport/membrane protein Chain: A: PDB Molecule:importin alpha subunit; PDBTitle: structure of the kap60p:nup2 complex 67 c1qkiE_ not modelled 5.6 43 PDB header:oxidoreductase Chain: E: PDB Molecule:glucose-6-phosphate 1-dehydrogenase; PDBTitle: x-ray structure of human glucose 6-phosphate dehydrogenase2 (variant canton r459l) complexed with structural nadp+ 68 d1r4pb_ not modelled 5.5 39 Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Bacterial AB5 toxins, B-subunits 69 d1l8na1 not modelled 5.5 45 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:alpha-D-glucuronidase/Hyaluronidase catalytic domain 70 d2ef1a1 not modelled 5.5 23 Fold:Flavodoxin-like Superfamily:N-(deoxy)ribosyltransferase-like Family:ADP ribosyl cyclase-like 71 d1c4qa_ not modelled 5.3 33 Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Bacterial AB5 toxins, B-subunits 72 d1zs4a1 not modelled 5.3 23 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Bacteriophage CII protein 73 c2o8vA_ not modelled 5.2 21 PDB header:oxidoreductase Chain: A: PDB Molecule:phosphoadenosine phosphosulfate reductase; PDBTitle: paps reductase in a covalent complex with thioredoxin c35a

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0