Phyre 2 alignment of P39220 with d1mjea2

Return to main results | Retrieve Phyre Job Id

Job Description | P39220
Confidence | 5.65% | Date | Thu Jan 5 11:58:32 GMT 2012
Rank | 65 | Aligned Residues | 25
% Identity | 28% | Template | d1mjea2
SCOP info | BRCA2 tower domain | BRCA2 tower domain | BRCA2 tower domain
Resolution | 3.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 47 | . | . | 50 | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | .
Predicted Secondary structure |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | W | S | D | K | . | . | . | . | . | . | . | . | . | . | . | . | Q | T | E | A | Y | K | L | L | F | N | F | V | N | N | Q | T | G | N | I | N
Query Conservation |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | R | S | E | R | E | E | E | K | E | A | L | R | F | A | E | A | Q | Q | K | K | L | E | A | L | F | T | K | V | H | T | L | S | R | D | V | T
Template Known Secondary structure |  |  |  |  | G | G | G | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | B |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2762 | . | . | . | . | . | . | . | 2770 | . | . | . | . | . | . | . | . | . | 2780 | . | . | . | . | . | . | . | . | . | 2790 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions