Phyre 2 alignment of P39220 with c3b9tD_

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Job Description | P39220
Confidence | 7.92% | Date | Thu Jan 5 11:58:32 GMT 2012
Rank | 38 | Aligned Residues | 25
% Identity | 40% | Template | c3b9tD_
PDB info | PDB header:hydrolase | Chain: D: PDB Molecule:twin-arginine translocation pathway signal protein; | PDBTitle: crystal structure of predicted acetamidase/formamidase (yp_546212.1)2 from methylobacillus flagellatus kt at 1.58 a resolution
Resolution | 1.58 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | D | I | E | L | S | V | T | F | F | I | E | K | N | K | I | C | T | Q | T | L | Q | L | H | K | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | D | S | E | X | C | G | T | . | A | I | E | C | S | L | T | G | T | F | Q | F | I | L | H | K | K
Template Known Secondary structure |  |  | T | B |  | T | T | S |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 347 | . | . | 350 | . | . | . | . |  | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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