Email l.a.kelley@imperial.ac.uk Description P33599 Date Thu Jan 5 11:52:22 GMT 2012 Unique Job ID 59ea08c71b61b1b6

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2fug41 100.0 42 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nqo4-like 2 c2fug4_ 100.0 42 PDB header:oxidoreductase Chain: 4: PDB Molecule:nadh-quinone oxidoreductase chain 4; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 3 d1frfl_ 100.0 15 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 4 d1e3db_ 100.0 16 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 5 d1yq9h1 100.0 15 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 6 c1h2aL_ 100.0 14 PDB header:oxidoreductase Chain: L: PDB Molecule:hydrogenase; PDBTitle: single crystals of hydrogenase from desulfovibrio vulgaris 7 c2wpnB_ 100.0 19 PDB header:oxidoreductase Chain: B: PDB Molecule:periplasmic [nifese] hydrogenase, large subunit, PDBTitle: structure of the oxidised, as-isolated nifese hydrogenase2 from d. vulgaris hildenborough 8 d1cc1l_ 100.0 17 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 9 c3myrB_ 100.0 16 PDB header:oxidoreductase Chain: B: PDB Molecule:nickel-dependent hydrogenase large subunit; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state 10 d1wuil1 100.0 15 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 11 d2fug51 100.0 34 Fold:Nqo5-like Superfamily:Nqo5-like Family:Nqo5-like 12 c3mcrA_ 100.0 29 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh dehydrogenase, subunit c; PDBTitle: crystal structure of nadh dehydrogenase subunit c (tfu_2693) from2 thermobifida fusca yx-er1 at 2.65 a resolution 13 d1v97a4 45.2 2 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 14 c2ibpB_ 29.2 15 PDB header:transferase Chain: B: PDB Molecule:citrate synthase; PDBTitle: crystal structure of citrate synthase from pyrobaculum aerophilum 15 d1ghha_ 25.7 15 Fold:DNA damage-inducible protein DinI Superfamily:DNA damage-inducible protein DinI Family:DNA damage-inducible protein DinI 16 d1ffvc1 24.6 10 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 17 d2ntka1 23.4 23 Fold:Ntn hydrolase-like Superfamily:Archaeal IMP cyclohydrolase PurO Family:Archaeal IMP cyclohydrolase PurO 18 c1ufiD_ 23.3 40 PDB header:dna binding protein Chain: D: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of the dimerization domain of human cenp-b 19 d1ufia_ 23.0 40 Fold:ROP-like Superfamily:Dimerisation domain of CENP-B Family:Dimerisation domain of CENP-B 20 d2qswa1 21.4 14 Fold:Ferredoxin-like Superfamily:ACT-like Family:NIL domain-like 21 d2zpya3 not modelled 20.3 9 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:First domain of FERM 22 d1ni2a3 not modelled 19.6 10 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:First domain of FERM 23 d2qrra1 not modelled 19.4 13 Fold:Ferredoxin-like Superfamily:ACT-like Family:NIL domain-like 24 d1ef1a3 not modelled 19.0 9 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:First domain of FERM 25 c2w3zA_ not modelled 18.6 7 PDB header:hydrolase Chain: A: PDB Molecule:putative deacetylase; PDBTitle: structure of a streptococcus mutans ce4 esterase 26 d2c5sa2 not modelled 18.4 10 Fold:THUMP domain Superfamily:THUMP domain-like Family:THUMP domain 27 d1vqza1 not modelled 16.8 17 Fold:SufE/NifU Superfamily:SufE/NifU Family:SP1160 C-terminal domain-like 28 c2dgyA_ not modelled 16.6 9 PDB header:translation Chain: A: PDB Molecule:mgc11102 protein; PDBTitle: solution structure of the eukaryotic initiation factor 1a2 in mgc11102 protein 29 c3kfwX_ not modelled 16.0 36 PDB header:structural genomics, unknown function Chain: X: PDB Molecule:uncharacterized protein; PDBTitle: uncharacterized protein rv0674 from mycobacterium tuberculosis 30 c2f3oB_ not modelled 15.9 18 PDB header:unknown function Chain: B: PDB Molecule:pyruvate formate-lyase 2; PDBTitle: crystal structure of a glycyl radical enzyme from archaeoglobus2 fulgidus 31 c2g40A_ not modelled 15.4 29 PDB header:unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of a duf162 family protein (dr_1909) from2 deinococcus radiodurans at 1.70 a resolution 32 d2g40a1 not modelled 15.4 29 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:YkgG-like 33 d1u07a_ not modelled 15.4 7 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 34 c3kwlA_ not modelled 15.3 18 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a hypothetical protein from helicobacter pylori 35 d1gg3a3 not modelled 15.2 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:First domain of FERM 36 c2cveA_ not modelled 14.4 6 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ttha1053; PDBTitle: crystal structure of a conserved hypothetical protein tt1547 from2 thermus thermophilus hb8 37 c3hrdC_ not modelled 14.1 12 PDB header:oxidoreductase Chain: C: PDB Molecule:nicotinate dehydrogenase fad-subunit; PDBTitle: crystal structure of nicotinate dehydrogenase 38 c2dnwA_ not modelled 12.9 17 PDB header:transport protein Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: solution structure of rsgi ruh-059, an acp domain of acyl2 carrier protein, mitochondrial [precursor] from human cdna 39 c2oqkA_ not modelled 12.8 6 PDB header:translation Chain: A: PDB Molecule:putative translation initiation factor eif-1a; PDBTitle: crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a 40 c1wvtA_ not modelled 12.6 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st2180; PDBTitle: crystal structure of uncharacterized protein st2180 from sulfolobus2 tokodaii 41 c2grxC_ not modelled 12.0 4 PDB header:metal transport Chain: C: PDB Molecule:protein tonb; PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome 42 d3dhxa1 not modelled 11.8 16 Fold:Ferredoxin-like Superfamily:ACT-like Family:NIL domain-like 43 c1bl1A_ not modelled 11.7 38 PDB header:hormone receptor Chain: A: PDB Molecule:parathyroid hormone receptor; PDBTitle: pth receptor n-terminus fragment, nmr, 1 structure 44 c2c5sA_ not modelled 11.5 10 PDB header:rna-binding protein Chain: A: PDB Molecule:probable thiamine biosynthesis protein thii; PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain 45 c3echC_ not modelled 11.1 55 PDB header:transcription, transcription regulation Chain: C: PDB Molecule:25-mer fragment of protein armr; PDBTitle: the marr-family repressor mexr in complex with its antirepressor armr 46 d1rtya_ not modelled 10.7 10 Fold:Ferritin-like Superfamily:Cobalamin adenosyltransferase-like Family:Cobalamin adenosyltransferase 47 d1r9da_ not modelled 10.6 15 Fold:PFL-like glycyl radical enzymes Superfamily:PFL-like glycyl radical enzymes Family:PFL-like 48 d2gskb1 not modelled 10.4 4 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 49 c2jynA_ not modelled 10.0 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0368 protein ypl225w; PDBTitle: a novel solution nmr structure of protein yst0336 from2 saccharomyces cerevisiae. northeast structural genomics3 consortium target yt51/ontario centre for structural4 proteomics target yst0336 50 d1es6a2 not modelled 10.0 55 Fold:EV matrix protein Superfamily:EV matrix protein Family:EV matrix protein 51 c1es6A_ not modelled 9.8 55 PDB header:viral protein Chain: A: PDB Molecule:matrix protein vp40; PDBTitle: crystal structure of the matrix protein of ebola virus 52 c1xx3A_ not modelled 9.7 3 PDB header:transport protein Chain: A: PDB Molecule:tonb protein; PDBTitle: solution structure of escherichia coli tonb-ctd 53 d1gxma_ not modelled 9.5 25 Fold:alpha/alpha toroid Superfamily:Family 10 polysaccharide lyase Family:Family 10 polysaccharide lyase 54 d1n62c1 not modelled 9.0 9 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 55 c3k1dA_ not modelled 8.6 23 PDB header:transferase Chain: A: PDB Molecule:1,4-alpha-glucan-branching enzyme; PDBTitle: crystal structure of glycogen branching enzyme synonym: 1,4-alpha-d-2 glucan:1,4-alpha-d-glucan 6-glucosyl-transferase from mycobacterium3 tuberculosis h37rv 56 d1d7qa_ not modelled 8.6 5 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 57 d1x2ga1 not modelled 8.5 19 Fold:SufE/NifU Superfamily:SufE/NifU Family:SP1160 C-terminal domain-like 58 d1yeya2 not modelled 8.1 14 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 59 d1jt8a_ not modelled 7.3 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 60 c2fq2A_ not modelled 7.3 12 PDB header:lipid transport Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: solution structure of minor conformation of holo-acyl2 carrier protein from malaria parasite plasmodium falciparum 61 d2oeza1 not modelled 7.3 8 Fold:YacF-like Superfamily:YacF-like Family:YacF-like 62 d1h4ra3 not modelled 7.2 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:First domain of FERM 63 c2kw0A_ not modelled 7.0 12 PDB header:oxidoreductase Chain: A: PDB Molecule:ccmh protein; PDBTitle: solution structure of n-terminal domain of ccmh from escherichia.coli 64 d3ceda1 not modelled 7.0 16 Fold:Ferredoxin-like Superfamily:ACT-like Family:NIL domain-like 65 c2zhzC_ not modelled 7.0 8 PDB header:transferase Chain: C: PDB Molecule:atp:cob(i)alamin adenosyltransferase, putative; PDBTitle: crystal structure of a pduo-type atp:cobalamin adenosyltransferase2 from burkholderia thailandensis 66 c2l9fA_ not modelled 7.0 9 PDB header:transferase Chain: A: PDB Molecule:cale8; PDBTitle: nmr solution structure of meacp 67 d1vi7a2 not modelled 6.9 12 Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:YigZ C-terminal domain-like 68 c1vi7A_ not modelled 6.8 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yigz; PDBTitle: crystal structure of an hypothetical protein 69 c2hl7A_ not modelled 6.5 18 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccmh; PDBTitle: crystal structure of the periplasmic domain of ccmh from pseudomonas2 aeruginosa 70 d1jroa3 not modelled 6.5 17 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 71 c2p4vA_ not modelled 6.5 15 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 72 c2fq8A_ not modelled 6.4 36 PDB header:unknown function Chain: A: PDB Molecule:2f; PDBTitle: nmr structure of 2f associated with lipid disc 73 c2fq5A_ not modelled 6.4 36 PDB header:unknown function Chain: A: PDB Molecule:peptide 2f; PDBTitle: nmr structure of 2f associated with lipid disc 74 d7mdha2 not modelled 6.3 0 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 75 c1hucC_ not modelled 6.3 18 PDB header:thiol protease Chain: C: PDB Molecule:cathepsin b; PDBTitle: the refined 2.15 angstroms x-ray crystal structure of human2 liver cathepsin b: the structural basis for its specificity 76 c3sc0A_ not modelled 6.3 25 PDB header:oxidoreductase Chain: A: PDB Molecule:methylmalonic aciduria and homocystinuria type c protein; PDBTitle: crystal structure of mmachc (1-238), a human b12 processing enzyme,2 complexed with methylcobalamin 77 d1v8ca2 not modelled 6.2 20 Fold:TBP-like Superfamily:MoaD-related protein, C-terminal domain Family:MoaD-related protein, C-terminal domain 78 d2up1a2 not modelled 6.1 19 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 79 c2ochA_ not modelled 6.1 38 PDB header:chaperone Chain: A: PDB Molecule:hypothetical protein dnj-12; PDBTitle: j-domain of dnj-12 from caenorhabditis elegans 80 c2vgpD_ not modelled 6.1 28 PDB header:transferase Chain: D: PDB Molecule:inner centromere protein a; PDBTitle: crystal structure of aurora b kinase in complex with a2 aminothiazole inhibitor 81 d1uptd_ not modelled 6.1 31 Fold:GRIP domain Superfamily:GRIP domain Family:GRIP domain 82 d2jeka1 not modelled 6.0 19 Fold:Rv1873-like Superfamily:Rv1873-like Family:Rv1873-like 83 d2r4qa1 not modelled 6.0 12 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:PTS system IIB component-like Family:PTS system, Fructose specific IIB subunit-like 84 c2e5aA_ not modelled 5.9 8 PDB header:ligase Chain: A: PDB Molecule:lipoyltransferase 1; PDBTitle: crystal structure of bovine lipoyltransferase in complex2 with lipoyl-amp 85 d1t3qc1 not modelled 5.9 8 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 86 c2l4bA_ not modelled 5.8 8 PDB header:transferase Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: solution structure of a putative acyl carrier protein from anaplasma2 phagocytophilum. seattle structural genomics center for infectious3 disease target anpha.01018.a 87 c2kciA_ not modelled 5.8 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative acyl carrier protein; PDBTitle: solution nmr structure of gmet_2339 from geobacter2 metallireducens. northeast structural genomics consortium3 target gmr141 88 d2q22a1 not modelled 5.8 13 Fold:Ava3019-like Superfamily:Ava3019-like Family:Ava3019-like 89 c2pt7G_ not modelled 5.7 13 PDB header:hydrolase/protein binding Chain: G: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of cag virb11 (hp0525) and an inhibitory protein2 (hp1451) 90 d1vcta1 not modelled 5.7 10 Fold:Spectrin repeat-like Superfamily:PhoU-like Family:PhoU-like 91 d2qlvb1 not modelled 5.7 19 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:AMPK-beta glycogen binding domain-like 92 d1r6ta2 not modelled 5.6 23 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 93 c2k9kA_ not modelled 5.6 17 PDB header:metal transport Chain: A: PDB Molecule:tonb2; PDBTitle: molecular characterization of the tonb2 protein from vibrio2 anguillarum 94 d2f15a1 not modelled 5.6 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:AMPK-beta glycogen binding domain-like 95 c3g59A_ not modelled 5.5 27 PDB header:transferase Chain: A: PDB Molecule:fmn adenylyltransferase; PDBTitle: crystal structure of candida glabrata fmn2 adenylyltransferase in complex with atp 96 c2or0B_ not modelled 5.5 7 PDB header:oxidoreductase Chain: B: PDB Molecule:hydroxylase; PDBTitle: structural genomics, the crystal structure of a putative hydroxylase2 from rhodococcus sp. rha1 97 c2dn9A_ not modelled 5.5 21 PDB header:apoptosis, chaperone Chain: A: PDB Molecule:dnaj homolog subfamily a member 3; PDBTitle: solution structure of j-domain from the dnaj homolog, human2 tid1 protein 98 c3oakC_ not modelled 5.5 57 PDB header:transcription Chain: C: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of a spn1 (iws1)-spt6 complex 99 c3fq9A_ not modelled 5.4 5 PDB header:hormone Chain: A: PDB Molecule:insulin; PDBTitle: design of an insulin analog with enhanced receptor-binding2 selectivity. rationale, structure, and therapeutic3 implications