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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1es6A_

Fold library idPDB HeaderMoleculeTitle
c1es6A_PDB header: viral proteinChain: A: PDB Molecule: matrix protein vp40;PDBTitle: crystal structure of the matrix protein of ebola virus


Added to library: Tue Mar 16 12:35:23 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence GDTPSNPLRPIADDTIDHASHTPGSVSSAFILEAMVNVISGPKVLMKQIPIWLPLGVADQKTYSFDSTTA
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Known secondary structure (DSSP)






B


TT

GGGT
STT

TT
SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AIMLASYTITHFGKATNPLVRVNRLGPGIPDHPLRLLRIGNQAFLQEFVLPPVQLPQYFTFDLTALKLIT
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Known secondary structure (DSSP) TS


SSS

S


TT
SSSS
S



S

 .........150.........160.........170.........180.........190.........200.........210
Sequence QPLPAATWTDDGALRPGISFHPKLRPILLPNKNSADLTSPEKIQAIMTSLQDFKIVPIDPTKNIMGIEVP
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Known secondary structure (DSSP)

TTB







TTS






S
GGG
GGGT

 .........220.........230.........240.........250.........260
Sequence ETLVLKLTGGQPIIPVLLPKYIGLDPVAPGDLTMVITQDCDTCHSPASLP
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Known secondary structure (DSSP) T





TTS



TTTT

S



S
TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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